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Lj5g3v0391410.1

Overview

Field Value
Gene ID Lj5g3v0391410
Transcript ID Lj5g3v0391410.1
Lotus japonicus genome version MG20 v3.0
Description beta-glucosidase D4 [Lotus japonicus] gi|208081617|gb|ACD65509.2|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR10353:SF81
1 407 407 4.50E-303 –
SUPERFAMILY
SSF51445
1 406 406 1.04E-157
IPR017853
Gene3D
G3DSA:3.20.20.80
1 406 406 5.30E-177
IPR013781
Pfam
PF00232
1 406 406 3.90E-129
IPR001360
PANTHER
PTHR10353
1 407 407 4.50E-303
IPR001360
PRINTS
PR00131
236 250 15 1.50E-23
IPR001360
ProSitePatterns
PS00572
310 318 9 –
IPR018120
PRINTS
PR00131
310 318 9 1.50E-23
IPR001360
PRINTS
PR00131
333 344 12 1.50E-23
IPR001360
PRINTS
PR00131
354 371 18 1.50E-23
IPR001360
PRINTS
PR00131
378 390 13 1.50E-23
IPR001360

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0004553
Molecular function Hydrolase activity, hydrolyzing O-glycosyl compounds Catalysis of the hydrolysis of any O-glycosyl bond.
Subterm of
GO:0005975
Biological process Carbohydrate metabolic process The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule.
Subterm of

Genome browser

LORE1 insertions 2

Expression data

Expression pattern

Expression pattern of Lj5g3v0391410.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

Loading expression data from ljgea-geneid. Please wait…

Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj5g3v0391410.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.