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| Field | Value |
|---|---|
| Gene ID | Lj5g3v0553260 |
| Transcript ID | Lj5g3v0553260.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: DDB1- and CUL4-associated factor homolog 1-like [Glycine max] gi|356518282|ref|XP_003527808.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 556 | 556 | 0 | ||
| PANTHER | 1 | 556 | 556 | 0 | – | |
| SUPERFAMILY | 270 | 321 | 52 | 1.15E-05 | ||
| SUPERFAMILY | 513 | 531 | 19 | 1.15E-05 | ||
| MobiDBLite | 538 | 597 | 60 | – | – | |
| PANTHER | 603 | 833 | 231 | 0 | ||
| PANTHER | 603 | 833 | 231 | 0 | – | |
| SUPERFAMILY | 638 | 698 | 61 | 1.15E-05 | ||
| ProSiteProfiles | 773 | 805 | 33 | 9.09 | ||
| SMART | 773 | 805 | 33 | 0.0081 | ||
| MobiDBLite | 812 | 832 | 21 | – | – | |
| PANTHER | 867 | 992 | 126 | 0 | – | |
| PANTHER | 867 | 992 | 126 | 0 | ||
| MobiDBLite | 880 | 911 | 32 | – | – | |
| PANTHER | 1037 | 1501 | 465 | 0 | – | |
| PANTHER | 1037 | 1501 | 465 | 0 | ||
| Gene3D | 1114 | 1351 | 238 | 2.10E-18 | ||
| SMART | 1115 | 1155 | 41 | 0.47 | ||
| SUPERFAMILY | 1117 | 1349 | 233 | 6.11E-19 | ||
| ProSiteProfiles | 1123 | 1207 | 85 | 10.838 | ||
| SMART | 1158 | 1198 | 41 | 1.8 | ||
| SMART | 1203 | 1241 | 39 | 280 | ||
| MobiDBLite | 1425 | 1506 | 82 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
| Biological process | Protein ubiquitination | The process in which one or more ubiquitin groups are added to a protein. |
Expression pattern of Lj5g3v0553260.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj5g3v0553260.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.