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Lj5g3v0879440.1

Overview

Field Value
Gene ID Lj5g3v0879440
Transcript ID Lj5g3v0879440.1
Lotus japonicus genome version MG20 v3.0
Description mitotic cyclin [Sesbania rostrata] gi|1835260|emb|CAA99990.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PIRSF
PIRSF001771
27 280 254 2.40E-117 –
SUPERFAMILY
SSF47954
29 145 117 4.86E-43
IPR013763
PANTHER
PTHR10177:SF253
30 288 259 4.20E-128 –
PANTHER
PTHR10177
30 288 259 4.20E-128 –
Pfam
PF00134
31 145 115 7.50E-41
IPR006671
Gene3D
G3DSA:1.10.472.10
37 139 103 1.30E-41
IPR013763
CDD
cd00043
49 138 90 8.21E-20 –
ProSitePatterns
PS00292
50 81 32 –
IPR006671
SMART
SM00385
55 139 85 1.20E-21
IPR013763
Gene3D
G3DSA:1.10.472.10
140 271 132 3.20E-42
IPR013763
CDD
cd00043
146 236 91 1.03E-05 –
SUPERFAMILY
SSF47954
147 269 123 1.23E-35
IPR013763
SMART
SM01332
148 268 121 7.40E-34
IPR004367
Pfam
PF02984
148 267 120 1.70E-31
IPR004367
SMART
SM00385
152 237 86 1.30E-17
IPR013763

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0042025
Cellular component Host cell nucleus A membrane-bounded organelle as it is found in the host cell in which chromosomes are housed and replicated. The host is defined as the larger of the organisms involved in a symbiotic interaction.
Subterm of

Genome browser

LORE1 insertions 9

Expression data

Expression pattern

Expression pattern of Lj5g3v0879440.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj5g3v0879440.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.