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Lj5g3v1048230.2

Overview

Field Value
Gene ID Lj5g3v1048230
Transcript ID Lj5g3v1048230.2
Related isoforms 1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: outer envelope protein of 80 kDa, chloroplastic-like [Glycine max] gi|356536814|ref|XP_003536929.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR12815:SF10
1 217 217 1.90E-122 –
PANTHER
PTHR12815
1 217 217 1.90E-122 –
Gene3D
G3DSA:2.40.160.50
16 199 184 1.90E-13 –
Pfam
PF01103
108 216 109 2.20E-09
IPR000184
MobiDBLite
mobidb-lite
198 217 20 – –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0019867
Cellular component Outer membrane The external membrane of Gram-negative bacteria or certain organelles such as mitochondria and chloroplasts; freely permeable to most ions and metabolites.
Subterm of

Genome browser

LORE1 insertions 6

Expression data

Expression pattern

Expression pattern of Lj5g3v1048230.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj5g3v1048230.2, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.