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Lj5g3v1174410.1

Overview

Field Value
Gene ID Lj5g3v1174410
Transcript ID Lj5g3v1174410.1
Lotus japonicus genome version MG20 v3.0
Description protease inhibitor [Medicago truncatula] gi|357494051|ref|XP_003617314.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR33091
2 69 68 3.00E-39 –
PANTHER
PTHR33091:SF14
2 69 68 3.00E-39 –
Gene3D
G3DSA:3.30.10.10
3 69 67 5.70E-32 –
SUPERFAMILY
SSF54654
3 69 67 1.31E-24
IPR000864
Pfam
PF00280
7 69 63 7.40E-27
IPR000864
ProDom
PD002604
9 69 61 2.00E-12
IPR000864
PRINTS
PR00292
9 22 14 1.90E-09
IPR000864
ProSitePatterns
PS00285
10 21 12 –
IPR000864
PRINTS
PR00292
34 45 12 1.90E-09
IPR000864
PRINTS
PR00292
46 56 11 1.90E-09
IPR000864

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0004867
Molecular function Serine-type endopeptidase inhibitor activity Stops, prevents or reduces the activity of serine-type endopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain; a serine residue (and a histidine residue) are at the active center of the enzyme.
Subterm of
GO:0009611
Biological process Response to wounding Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to the organism.
Subterm of

Genome browser

LORE1 insertions

No LORE1 insertions have been found in the genomic region that overlaps with this gene.

Expression data

Expression pattern

Expression pattern of Lj5g3v1174410.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj5g3v1174410.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.