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Lj5g3v1212600.1

Overview

Field	Value
Gene ID	Lj5g3v1212600
Transcript ID	Lj5g3v1212600.1
Lotus japonicus genome version	MG20 v3.0
Description	Isoflavone-7-O-methyltransferase [Medicago truncatula] gi\|357504137\|ref\|XP_003622357.1\|
Working Lj name	n.a.

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Prediction algorithm	Identifier	Start	End	Length	E-value	InterPro ID
ProSiteProfiles	PS51683 View details on PS51683 Search for proteins/transripts with this domain View external data on PS51683	1	236	236	61.395	IPR016461 Show description in modal box View details on IPR016461 Search for proteins/transripts with this domain View on EBI InterPro Service
Pfam	PF00891 View details on PF00891 Search for proteins/transripts with this domain View external data on PF00891	2	222	221	1.60E-57	IPR001077 Show description in modal box View details on IPR001077 Search for proteins/transripts with this domain View on EBI InterPro Service
PANTHER	PTHR11746:SF78 View details on PTHR11746:SF78 Search for proteins/transripts with this domain View external data on PTHR11746:SF78	4	236	233	4.80E-139	–
PANTHER	PTHR11746 View details on PTHR11746 Search for proteins/transripts with this domain View external data on PTHR11746	4	236	233	4.80E-139	–
SUPERFAMILY	SSF53335 View details on SSF53335 Search for proteins/transripts with this domain View external data on SSF53335	4	235	232	9.90E-54	IPR029063 Show description in modal box View details on IPR029063 Search for proteins/transripts with this domain View on EBI InterPro Service
Gene3D	G3DSA:3.40.50.150 View details on G3DSA:3.40.50.150 Search for proteins/transripts with this domain View external data on G3DSA:3.40.50.150	4	236	233	4.20E-77	IPR029063 Show description in modal box View details on IPR029063 Search for proteins/transripts with this domain View on EBI InterPro Service
CDD	cd02440 View details on cd02440 Search for proteins/transripts with this domain View external data on cd02440	75	163	89	5.07E-04	–

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on April 27, 2020, while the GO metadata was last updated on April 27, 2020.

GO term	Namespace	Name	Definition	Relationships
GO:0008171 View details of GO:0008171 AmiGO InterPro QuickGO	Molecular function	O-methyltransferase activity	Catalysis of the transfer of a methyl group to the oxygen atom of an acceptor molecule.	Subterm of View details of GO:0008168

Genome browser

LORE1 insertions

No LORE1 insertions have been found in the genomic region that overlaps with this gene.

Expression data

Expression pattern

Expression pattern of Lj5g3v1212600.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj5g3v1212600.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.