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Lj5g3v1749270.1

Overview

Field	Value
Gene ID	Lj5g3v1749270
Transcript ID	Lj5g3v1749270.1
Lotus japonicus genome version	MG20 v3.0
Description	PREDICTED: ubiquinone biosynthesis protein COQ9, mitochondrial-like [Glycine max] gi\|356547948\|ref\|XP_003542366.1\|
Working Lj name	n.a.

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Prediction algorithm	Identifier	Start	End	Length	E-value	InterPro ID
PANTHER	PTHR21427 View details on PTHR21427 Search for proteins/transripts with this domain View external data on PTHR21427	1	309	309	2.60E-96	–
MobiDBLite	mobidb-lite View details on mobidb-lite Search for proteins/transripts with this domain	63	95	33	–	–
TIGRFAM	TIGR02396 View details on TIGR02396 Search for proteins/transripts with this domain View external data on TIGR02396	100	283	184	3.70E-63	IPR012762 Show description in modal box View details on IPR012762 Search for proteins/transripts with this domain View on EBI InterPro Service
Pfam	PF08511 View details on PF08511 Search for proteins/transripts with this domain View external data on PF08511	205	280	76	7.30E-31	IPR013718 Show description in modal box View details on IPR013718 Search for proteins/transripts with this domain View on EBI InterPro Service

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on April 27, 2020, while the GO metadata was last updated on April 27, 2020.

GO term	Namespace	Name	Definition	Relationships
GO:0006744 View details of GO:0006744 AmiGO InterPro QuickGO	Biological process	Ubiquinone biosynthetic process	The chemical reactions and pathways resulting in the formation of ubiquinone, a lipid-soluble electron-transporting coenzyme.	Subterm of View details of GO:0006743 View details of GO:1901663
GO:0008289 View details of GO:0008289 AmiGO InterPro QuickGO	Molecular function	Lipid binding	Interacting selectively and non-covalently with a lipid.	Subterm of View details of GO:0005488

Genome browser

LORE1 insertions 28

Expression data

Expression pattern

Expression pattern of Lj5g3v1749270.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj5g3v1749270.1, powered by CORGI.

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