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| Field | Value |
|---|---|
| Gene ID | Lj5g3v2294660 |
| Transcript ID | Lj5g3v2294660.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: TBC1 domain family member 8B-like [Cicer arietinum] gi|502121569|ref|XP_004497373.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 7 | 58 | 52 | 0 | – | |
| PANTHER | 7 | 58 | 52 | 0 | – | |
| MobiDBLite | 65 | 135 | 71 | – | – | |
| PANTHER | 101 | 179 | 79 | 0 | – | |
| PANTHER | 101 | 179 | 79 | 0 | – | |
| MobiDBLite | 176 | 236 | 61 | – | – | |
| PANTHER | 198 | 206 | 9 | 0 | – | |
| PANTHER | 198 | 206 | 9 | 0 | – | |
| PANTHER | 233 | 286 | 54 | 0 | – | |
| PANTHER | 233 | 286 | 54 | 0 | – | |
| SUPERFAMILY | 240 | 421 | 182 | 4.45E-42 | ||
| Gene3D | 242 | 385 | 144 | 3.00E-33 | – | |
| SMART | 248 | 485 | 238 | 1.20E-58 | ||
| ProSiteProfiles | 251 | 461 | 211 | 37.086 | ||
| Pfam | 255 | 479 | 225 | 3.50E-50 | ||
| PANTHER | 314 | 668 | 355 | 0 | – | |
| PANTHER | 314 | 668 | 355 | 0 | – | |
| SUPERFAMILY | 398 | 513 | 116 | 4.71E-24 | ||
| Coils | 639 | 676 | 38 | – | – | |
| Coils | 709 | 736 | 28 | – | – | |
| MobiDBLite | 744 | 829 | 86 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of Lj5g3v2294660.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj5g3v2294660.2, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.