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Lj6g3v0483990.1

Overview

Field Value
Gene ID Lj6g3v0483990
Transcript ID Lj6g3v0483990.1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: sorting and assembly machinery component 50 homolog isoform X1 [Cicer arietinum] gi|502130034|ref|XP_004500508.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

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Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
MobiDBLite 1 63 63
PANTHER 69 414 346 1.40E-164
PANTHER 69 414 346 1.40E-164
Pfam 85 161 77 2.20E-07
Pfam 191 534 344 4.30E-26
MobiDBLite 408 430 23
PANTHER 432 537 106 1.40E-164
PANTHER 432 537 106 1.40E-164

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
Cellular component Outer membrane The external membrane of Gram-negative bacteria or certain organelles such as mitochondria and chloroplasts; freely permeable to most ions and metabolites.

LORE1 insertions 5

Expression data

Expression pattern

Expression pattern of Lj6g3v0483990.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj6g3v0483990.1, powered by CORGI.

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