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| Field | Value |
|---|---|
| Gene ID | Lj6g3v0609710 |
| Transcript ID | Lj6g3v0609710.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: phosphomethylpyrimidine synthase, chloroplastic-like [Cicer arietinum] gi|502129239|ref|XP_004500235.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 453 | 453 | 0 | – | |
| SFLD | 1 | 428 | 428 | 0 | – | |
| PANTHER | 1 | 453 | 453 | 0 | – | |
| Hamap | 1 | 425 | 425 | 53.359 | ||
| Pfam | 1 | 419 | 419 | 1.30E-196 | ||
| TIGRFAM | 3 | 422 | 420 | 7.80E-202 | ||
| SFLD | 15 | 449 | 435 | 0 | – | |
| SFLD | 22 | 419 | 398 | 0 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Thiamine biosynthetic process | The chemical reactions and pathways resulting in the formation of thiamine (vitamin B1), a water soluble vitamin present in fresh vegetables and meats, especially liver. | ||
| Molecular function | Iron-sulfur cluster binding | Interacting selectively and non-covalently with an iron-sulfur cluster, a combination of iron and sulfur atoms. |
Expression pattern of Lj6g3v0609710.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj6g3v0609710.1, powered by CORGI.
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