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Lj6g3v1513630.1

Overview

Field Value
Gene ID Lj6g3v1513630
Transcript ID Lj6g3v1513630.1
Lotus japonicus genome version MG20 v3.0
Description Pathogenesis-related protein PR10 [Medicago truncatula] gi|357449115|ref|XP_003594834.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR31213:SF11
1 158 158 5.00E-80 –
PANTHER
PTHR31213
1 158 158 5.00E-80 –
Pfam
PF00407
1 154 154 5.80E-27
IPR000916
Gene3D
G3DSA:3.30.530.20
1 157 157 3.50E-59
IPR023393
SUPERFAMILY
SSF55961
2 158 157 1.85E-41 –
PRINTS
PR00634
3 23 21 2.60E-47
IPR024949
CDD
cd07816
4 151 148 1.05E-50 –
PRINTS
PR00634
26 36 11 2.60E-47
IPR024949
PRINTS
PR00634
49 58 10 2.60E-47
IPR024949
PRINTS
PR00634
65 84 20 2.60E-47
IPR024949
PRINTS
PR00634
84 97 14 2.60E-47
IPR024949
ProSitePatterns
PS00451
88 120 33 –
IPR024949
PRINTS
PR00634
109 125 17 2.60E-47
IPR024949
PRINTS
PR00634
143 153 11 2.60E-47
IPR024949

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0004864
Molecular function Protein phosphatase inhibitor activity Stops, prevents or reduces the activity of a protein phosphatase, an enzyme that hydrolyzes phosphate groups from phosphorylated proteins.
Subterm of
GO:0006952
Biological process Defense response Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack.
Subterm of
GO:0009738
Biological process Abscisic acid-activated signaling pathway A series of molecular signals generated by the binding of the plant hormone abscisic acid (ABA) to a receptor, and ending with modulation of a cellular process, e.g. transcription.
Subterm of
Part of
GO:0010427
Molecular function Abscisic acid binding Interacting selectively and non-covalently with abscisic acid, plant hormones that regulate aspects of plant growth.
Subterm of
GO:0038023
Molecular function Signaling receptor activity Receiving a signal and transmitting it in the cell to initiate a change in cell activity. A signal is a physical entity or change in state that is used to transfer information in order to trigger a response.
Subterm of

Genome browser

LORE1 insertions 2

Expression data

Expression pattern

Expression pattern of Lj6g3v1513630.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj6g3v1513630.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.