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Lj6g3v1600820.1

Overview

Field Value
Gene ID Lj6g3v1600820
Transcript ID Lj6g3v1600820.1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: annexin D8-like [Glycine max] gi|356555950|ref|XP_003546292.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR10502
1 137 137 1.20E-73 –
SUPERFAMILY
SSF47874
1 137 137 7.99E-40 –
PANTHER
PTHR10502:SF113
1 137 137 1.20E-73 –
Gene3D
G3DSA:1.10.220.10
3 79 77 1.00E-17
IPR018502
Pfam
PF00191
6 71 66 2.80E-15
IPR018502
SMART
SM00335
19 71 53 1.50E-11
IPR018502
Gene3D
G3DSA:1.10.220.10
87 137 51 3.00E-07
IPR018502
Pfam
PF00191
90 137 48 5.10E-06
IPR018502

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0005509
Molecular function Calcium ion binding Interacting selectively and non-covalently with calcium ions (Ca2+).
Subterm of
GO:0005544
Molecular function Calcium-dependent phospholipid binding Interacting selectively and non-covalently with phospholipids, a class of lipids containing phosphoric acid as a mono- or diester, in the presence of calcium.
Subterm of

Genome browser

LORE1 insertions 10

Expression data

Expression pattern

Expression pattern of Lj6g3v1600820.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj6g3v1600820.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.