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Lj6g3v2221990.1

Overview

Field Value
Gene ID Lj6g3v2221990
Transcript ID Lj6g3v2221990.1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: methylenetetrahydrofolate reductase 2-like [Glycine max] gi|356509485|ref|XP_003523478.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
Gene3D
G3DSA:3.20.20.220
6 306 301 1.40E-126
IPR029041
SUPERFAMILY
SSF51730
13 305 293 5.89E-97
IPR029041
Pfam
PF02219
14 303 290 4.80E-124
IPR003171
TIGRFAM
TIGR00677
19 307 289 2.30E-148
IPR004621
CDD
cd00537
20 302 283 4.22E-119
IPR003171
PANTHER
PTHR21091:SF31
131 149 19 3.30E-80 –
PANTHER
PTHR21091
131 149 19 3.30E-80 –
PANTHER
PTHR21091:SF31
180 322 143 3.30E-80 –
PANTHER
PTHR21091
180 322 143 3.30E-80 –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0004489
Molecular function Methylenetetrahydrofolate reductase (NAD(P)H) activity Catalysis of the reaction: 5-methyltetrahydrofolate + NAD(P)+ = 5,10-methylenetetrahydrofolate + NAD(P)H + H+.
Subterm of
GO:0006555
Biological process Methionine metabolic process The chemical reactions and pathways involving methionine (2-amino-4-(methylthio)butanoic acid), a sulfur-containing, essential amino acid found in peptide linkage in proteins.
Subterm of
GO:0055114
Biological process Oxidation-reduction process A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.
Subterm of

Genome browser

LORE1 insertions 15

Expression data

Expression pattern

Expression pattern of Lj6g3v2221990.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj6g3v2221990.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.