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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0006200 |
| Transcript ID | LotjaGi1g1v0006200.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Chalcone reductase; TAIR: AT1G59960.1 NAD(P)-linked oxidoreductase superfamily protein; Swiss-Prot: sp|P26690|6DCS_SOYBN NAD(P)H-dependent 6'-deoxychalcone synthase; TrEMBL-Plants: tr|I3T5M5|I3T5M5_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0006200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:916181..920159) extracted from Lotus japonicus Gifu genome v1.2.
ATAAAAACAAAAGTGTAATATATTAAAGCCTTCCAAGTTTGACCATAGGAATATGCATGTACCCATTTTCAGGTATAAAA AAGGTTGCAACCCCAGCTCAATCCATCATCAACAACCAAATCTCAAAGTGTAATACTACTACAGTACTACTCTAAACTCT CTCTACACTAAACAAATTTGAAGCTTTTCTCAAAATGGCTGCTGCTATTGAAATCCCAACAAGGGTGCTTACCAACACCT CTGACCAACTGAAGATTCCAGTGATTGGAATGGGATCAGCCCCTGACTTCACATGTAAGAAAGACACAAGAGATGCAATC ATTGAAGCCATCAAACAAGGTTACAGACACTTTGACACTGCTGCTGCATATGGCTCTGAACAAGCTCTTGGTGAAGCTTT GAAGGAAGCACTTGACCTTGGACTTGTCTCTCGTGAAGAGCTCTTTGTCACTTCCAAGCTTTGGGTCACTGAAAACCACC CTCATCTTGTTGTTCCTGCTTTGCAGAAATCACTCAAGTAAGTAACATCAAGTATATACACACTTCTTTCAATATTGGTT GGTTCAATCAGTGGTTTGATGAAGCTCGTGTACTTCTTTTGTGCAGAACTCTTCAACTGGAGTACTTGGACCTTTATCTG ATCCACTGGCCCCTCAGTTCTACACCAGGAAAGTTCTCATTTCCAATTGCTATGGAGGATCTCTTGCCATTTGATGTGAA GGGTGTCTGGGAATCCATGGAAGAGTGCCTCAAACTTGGCCTCACCAAAGCTATTGGTGTCAGCAACTTCTCTGTTAAGA AACTTCAAAATCTGCTCTCTGTTGCCAATATCCTTCCTGCTGTGAATCAAGTAATTAATTAACCAACCCAACTCTCTCAC AATTGTGCTGTTTGAATTCATTTATTATCTTCCTGAGTCTTGATTGTGTGTGTTGTTCATATGAATGATTATGAGATTGA TTAATGTTGACTAACTAAAATTAATCAATTGATATATATTATATAGGTGGAGATGAACCTTGCATGGCAACAAAAGGAAC TAAGAGAGTTCTGCAATGCAAATGGAATAGTCCTCACCGCCTTCTCACCTTTGAGGAAAGGTGGCAGCAGGGGACCAAAT GAAGTTATGGAGAATGATATGTTGAAAGAGATTGCAGAGGCTCATGGAAAGACTATAGCTCAGGTCAGTCTGAGGTGGTT GTATGAACAAGGAGTCACATTTGCGGCAAAGAGCTATGATAAGGACAGGATGAACCAAAATCTGCAAATCTTTGATTGGG CACTCACAAAGGAGGATCTTGAGAAAATAGATCAAATCAAGCAGAACCGTCTGATTCCTGGACCAACCAAGCCCCAGCTC AATGATCTCTATGATGACTAAGCATAAGTTATTGATGTTTGCCTTGAATTAATTCCTTTTTTTAATCTTTGTTTCTTATC CTGAAATGTAGAGCTTTGAATGAGCTGTCTTTTCCTTTTGGGTTTAAATAAATGATGTTACACAAGTTTCTTTTGCCACA GTTATTTTACACAAGTTGTTATTCTAGTGATTGGTATAATTTAATCATTCAATTAAGGGATGTTCCCAACAAATAAAAGA AATATATTACTAAGGCTCATATGTCATATTGAGGCCTAACAAGAGAAACAAATCTTTCATAACAGTTCTATATCACCTTT AATGGTGCATAACACAGCAACAGAAAATACTTTCAGAGGCCATAAAAACAAAGCATGATACAAGGGAAAGTAATTCAATA ACATGATCATCGAGCAAGTCAATGGATTACCTCTAACTACCGAGGTTTCTCAAACGCTTCAGCACATCACTTTCGCCTGT GAGTTGCCTGACCAAACCTTTAAATTCACCAGAAAAATTCAATACCGCATGGCCAAACATGATTAAACATTTAAACCAAT TGAATGAAGTGTAGCTGAAGTCAAATTATGTTCAATAGAACTTGTAAATTAACCATTCAAGTTTCCCAATGAGCTACTTG ACTAACACAAGAACGCAATATCACAATCCAATTGTGCAGGGCAGGTTGAATTATGATCCTAGACATATGGAGTTCATGAT TTCCCAATTATGTAATTTATATAGTAATAACACACAAAACGCAAGGATCCTCCGAATTTTTTCCACAAAAAACATAGTAT CCTTTCATGGCATATGAGGATGTCATGTAAAATTTTGTGTCTATCTCTCTCTCTTCATGGATATTTAAGAGATGAATATT CATAGGGTACCACCTGTTTAATAGGTATGATGATAGAACCCAGCCAAGAACTGATATTCTTCAATGGTAGAAGCCCCCCC CCCCCCCACCCAAATTAGGGAATTAGAGACAGATACAAGAGAGAGCTCCTCTCCCTAATCCAAAATCCCAAATGATATCC AAAAGATACAAAAGATCTCTCTAACTCTCTTATTTATAATACTCCCTTTCACAACTAACTAAACTCTTCTAACTAACTAA CAAACTACTAACACTTCTTAACTAAGCTACTTAACTAACCTGCTAACCGTGAGTACCTATCATGAAGAGAGACGCAACAT TTTAACATAAGATATAGTCCATTGTTGAACTAAATTATTACCATTGGTGTAATTGCGACAATCATTAAGACCAATCCTCA AATTTGTTTCCCATATCTTGTTGTATTCACTTGCAATTTCCACAGCATTTGAGTTTGCATATCCAACTAGCCAGCATTTT CGTCGTGGCAACTTTTTTAACTTCCTCACGAGAACAGCTCCTAAGAATATTAACAGAGGTCATGATTTGAATAAGTTGAA ATCCAATCAGAAAGCTTAAGAAAGCTAAGAAGAGTCCATGTTTGTCAAATGAATTGTAACTTGGTTGGCTTTATAATTTC ATCTCTGAAGAACATAATGCTCCAGAAATCAAATTCATAAAACTACTATTGCTCCAATTATACAAGCACCGAAAAAAAAT TCCTCTGCTAAATTCTGAGAACAAAATACATCACATCACACCCTTTCACTGATAAAAACTGAGGGCCAGAAGGAAACTAC ACAAATAACACAAAAGCTCATATGATGAAGCAAATTATTGATCATAATAACAAGGAACATCTTTCAGCATAAATACACCC ACATTGTGATTTTTGATATAGTTTATGTCCGACGGTAATTAAAATCTTGTAGCCTTAACACATGATGGTATGAGCATGTA ACAGAAGATAAATAACATTAATCTTGGTAGATAAGTCATCAGTTTTTATTTCAAGTTTTTGTAAACTATGCATAGCATTC TACACTTTTTCATAGTCTAGAAAAAACATGCATTATCTTGGTAATTAAAATTTCAACCATTCAGAAGCAGACTAGCATTC TCATATTCTCACCTGGCACTGCCCTACCACTTAGAACTGCTAGTGCCACATATATATCTTCAGGATCTATTGGTTGAAAA TCATAAACCAGAACCTGAAAAAGCACTTCCACTGTAATCAAACTAGAACTCAAGCTTGAAATAGGCACCCTTATGAGATG AACTCAACAGCAGCATAGGTCATATCAAATCACTTCAAATATCAGACTCATTAAGAAAAAAAAAATGAAATTGTGCATAG CACCCTTATCCATGAATTGGCAGGGAAACTAGTAACTATATACAAATTTTCTCCATTTGATAGAAATCATTTCTATTTGG ATTCTATTAACCTGAGAAGGTGAGCTGCAGGGTTTGATGATGACCATGAAATGCTGCAAATCCCAGATATTGAGGGTGTA AGCAGCAGACATGAGCAACTGGGGTGGTCCCTTTGCAGCCCTTAGAGGCATTGCTGCTACATACACTTGGTCTCTGCCAC TTACCATTGCCGAGTTTGACAACAGTGATACTACTGATGCCATTTCTCTGTCAGAATAATGACTCAAATGCACCAATTTC TATCTACAGGGGAAGATAAAACCTATTGAAGATGATATTACTGGTTCAAATTGCATCTT
CDS sequence (LotjaGi1g1v0006200.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCTGCTGCTATTGAAATCCCAACAAGGGTGCTTACCAACACCTCTGACCAACTGAAGATTCCAGTGATTGGAATGGG ATCAGCCCCTGACTTCACATGTAAGAAAGACACAAGAGATGCAATCATTGAAGCCATCAAACAAGGTTACAGACACTTTG ACACTGCTGCTGCATATGGCTCTGAACAAGCTCTTGGTGAAGCTTTGAAGGAAGCACTTGACCTTGGACTTGTCTCTCGT GAAGAGCTCTTTGTCACTTCCAAGCTTTGGGTCACTGAAAACCACCCTCATCTTGTTGTTCCTGCTTTGCAGAAATCACT CAAAACTCTTCAACTGGAGTACTTGGACCTTTATCTGATCCACTGGCCCCTCAGTTCTACACCAGGAAAGTTCTCATTTC CAATTGCTATGGAGGATCTCTTGCCATTTGATGTGAAGGGTGTCTGGGAATCCATGGAAGAGTGCCTCAAACTTGGCCTC ACCAAAGCTATTGGTGTCAGCAACTTCTCTGTTAAGAAACTTCAAAATCTGCTCTCTGTTGCCAATATCCTTCCTGCTGT GAATCAAGTGGAGATGAACCTTGCATGGCAACAAAAGGAACTAAGAGAGTTCTGCAATGCAAATGGAATAGTCCTCACCG CCTTCTCACCTTTGAGGAAAGGTGGCAGCAGGGGACCAAATGAAGTTATGGAGAATGATATGTTGAAAGAGATTGCAGAG GCTCATGGAAAGACTATAGCTCAGGTCAGTCTGAGGTGGTTGTATGAACAAGGAGTCACATTTGCGGCAAAGAGCTATGA TAAGGACAGGATGAACCAAAATCTGCAAATCTTTGATTGGGCACTCACAAAGGAGGATCTTGAGAAAATAGATCAAATCA AGCAGAACCGTCTGATTCCTGGACCAACCAAGCCCCAGCTCAATGATCTCTATGATGACTAA
Protein sequence (LotjaGi1g1v0006200.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAAAIEIPTRVLTNTSDQLKIPVIGMGSAPDFTCKKDTRDAIIEAIKQGYRHFDTAAAYGSEQALGEALKEALDLGLVSR EELFVTSKLWVTENHPHLVVPALQKSLKTLQLEYLDLYLIHWPLSSTPGKFSFPIAMEDLLPFDVKGVWESMEECLKLGL TKAIGVSNFSVKKLQNLLSVANILPAVNQVEMNLAWQQKELREFCNANGIVLTAFSPLRKGGSRGPNEVMENDMLKEIAE AHGKTIAQVSLRWLYEQGVTFAAKSYDKDRMNQNLQIFDWALTKEDLEKIDQIKQNRLIPGPTKPQLNDLYDD
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 2 | 313 | 312 | 3.4E-130 | ||
| PANTHER | 4 | 313 | 310 | 5.0E-184 | ||
| PANTHER | 4 | 313 | 310 | 5.0E-184 | – | |
| PIRSF | 8 | 310 | 303 | 2.8E-85 | ||
| CDD | 9 | 293 | 285 | 5.53951E-88 | ||
| SUPERFAMILY | 15 | 304 | 290 | 3.14E-85 | ||
| Pfam | 32 | 293 | 262 | 3.9E-50 | ||
| PRINTS | 45 | 69 | 25 | 3.3E-54 | ||
| ProSitePatterns | 49 | 66 | 18 | - | ||
| PRINTS | 105 | 123 | 19 | 3.3E-54 | ||
| ProSitePatterns | 152 | 169 | 18 | - | ||
| PRINTS | 152 | 169 | 18 | 3.3E-54 | ||
| PRINTS | 186 | 215 | 30 | 3.3E-54 | ||
| PRINTS | 229 | 253 | 25 | 3.3E-54 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Oxidoreductase activity | Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced. | ||
| Biological process | Oxidation-reduction process | A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons. |
Expression pattern of LotjaGi1g1v0006200.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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