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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0018600 |
| Transcript ID | LotjaGi1g1v0018600.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Alpha/beta-Hydrolases superfamily protein; TAIR: AT1G19190.1 alpha/beta-Hydrolases superfamily protein; Swiss-Prot: sp|Q5NUF4|HIDM_GLYEC 2-hydroxyisoflavanone dehydratase; TrEMBL-Plants: tr|A0A072UW70|A0A072UW70_MEDTR 2-hydroxyisoflavanone dehydratase; Found in the gene: LotjaGi1g1v0018600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:2280608..2282247) extracted from Lotus japonicus Gifu genome v1.2.
CATATTCAAACATCCAAGAATTGATTTTTCTATTTGGAAGATTCAAACACCAATTGAGTAACAAAATTTATCACCATCTA GATGATAAAGCATTATATATAATGCAAAAAAGCGAACTCTTATGTCCCAGAATTGAAATGGCTTCCACCACCACCAACAT TACTAAAGAGCTTGTTGCAGAGATACCTCCCTTTCTCAGAATCTTCAATGATGGCACAGTGGAGCGACCGCTACAAGCAC CAGCAGTTCCACCCTTGCTTGATGATCCACAAACAGAGCTCTCAACGAAAGACATCACCATCTCTCACCACCCCACAATC TCAGCCCGCCTTTTCCTTCCAAAAAAACTAAACCAAGATCATCATGTAGCTGAGAAAGTACCAATCTTGGTCTACTTTCA TGGTGGTGCTTTCATCTTGGAATCTGCTTTCTCTAAGTCATGTCATGATCATTTCAAAACCTTTGTTCCACAAACAAACG TTTTGGTCGTCTGTGTGGAGTACAGGCTTGCTCCTGAGCACCCTCTCCCTGCTTGTTACCATGACTGCTGGGCTGCACTC CAATGGGTATCCTCCCATTCCACCAAGAGCCTTAGCAATCCAGAGCCATGGTTGATTGACCATGGTGATTTAAACAGAAT TTTCATCGGTAAGTAATTAGATTGGTCCCTTAAATATACAATCTAAGATTAAATGTGTTTGAGTACATGACTAATTAAGT GCTTATGTTATTTTATTAGTTATCACATAAACATTTATTTATAAGTTTATTTGAGAAGTTCGGTGAAATAAACTCAAAGG TATAAACGTTTATTCATAAGTAAATCAAAGAAATATATCAAAATAAGCTGAAAGAAGCTAGCTTATAGTTAACTCATATG CTATTGTTATGAGTTTAATCAGTTCAAATAAGCTCTTTCACATACATTTTAATATGAGTGATACCACATGTTTCAAGAAC TAATGTCATTATTTACTTAAAATTTCCACAGGGGGTGATAGTGCTGGTGGTAACATTGCGCATAACATCGCCATGCGTGC AGGGATTGAGGTTTTACCAGGTGATGTTAAACTCTCAGGAGCATTTATAGTTCATCCCTTCTTCAACAGTTCATACCCAA TTGGATCAGAACCCATTATAGAGCCTGAACAGAACATTGACCACAAGATTTGGAATCTGGTGTATCCATCTGCACCAGGT GGTGTTGATAATCCCAAGCTCAACCCTGTGGGTCCTGGTGCACCTAGTCTGGCTACACTTGGATGCTCTAGAATCATTGT GTGTGTTGCTGGCAAGGATAGATTTAAGGACAGAGCTATTTGGTATTATGAAGCTGTGAAGAAAAGTGGATGGCAAGGGA AACTGGAGTTGTTTGAAGAGGAAGATGAGGATCATATTTATCATTGGTTAAAGCCAGAATCTGAGAGTGCCAAAAAGTTA TTCAAGCGTTTGGCTTCTTTTCTCCATGAGGAGTAGAAAAGAACTATCTTTGCTTGATTTGTTTTGTTGGTGACAATAAA CGTAATCTCTTTGGGATGTGAAATAATAAATAATAAGAATAGTGAGTAAGCCTTGAGGTTTCAAGCGAGTTTGGAAGAGT TTATTTGAGTTTATCTCATAGCATAAACACTCGAGTTTAC
CDS sequence (LotjaGi1g1v0018600.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCAAAAAAGCGAACTCTTATGTCCCAGAATTGAAATGGCTTCCACCACCACCAACATTACTAAAGAGCTTGTTGCAGA GATACCTCCCTTTCTCAGAATCTTCAATGATGGCACAGTGGAGCGACCGCTACAAGCACCAGCAGTTCCACCCTTGCTTG ATGATCCACAAACAGAGCTCTCAACGAAAGACATCACCATCTCTCACCACCCCACAATCTCAGCCCGCCTTTTCCTTCCA AAAAAACTAAACCAAGATCATCATGTAGCTGAGAAAGTACCAATCTTGGTCTACTTTCATGGTGGTGCTTTCATCTTGGA ATCTGCTTTCTCTAAGTCATGTCATGATCATTTCAAAACCTTTGTTCCACAAACAAACGTTTTGGTCGTCTGTGTGGAGT ACAGGCTTGCTCCTGAGCACCCTCTCCCTGCTTGTTACCATGACTGCTGGGCTGCACTCCAATGGGTATCCTCCCATTCC ACCAAGAGCCTTAGCAATCCAGAGCCATGGTTGATTGACCATGGTGATTTAAACAGAATTTTCATCGGGGGTGATAGTGC TGGTGGTAACATTGCGCATAACATCGCCATGCGTGCAGGGATTGAGGTTTTACCAGGTGATGTTAAACTCTCAGGAGCAT TTATAGTTCATCCCTTCTTCAACAGTTCATACCCAATTGGATCAGAACCCATTATAGAGCCTGAACAGAACATTGACCAC AAGATTTGGAATCTGGTGTATCCATCTGCACCAGGTGGTGTTGATAATCCCAAGCTCAACCCTGTGGGTCCTGGTGCACC TAGTCTGGCTACACTTGGATGCTCTAGAATCATTGTGTGTGTTGCTGGCAAGGATAGATTTAAGGACAGAGCTATTTGGT ATTATGAAGCTGTGAAGAAAAGTGGATGGCAAGGGAAACTGGAGTTGTTTGAAGAGGAAGATGAGGATCATATTTATCAT TGGTTAAAGCCAGAATCTGAGAGTGCCAAAAAGTTATTCAAGCGTTTGGCTTCTTTTCTCCATGAGGAGTAG
Protein sequence (LotjaGi1g1v0018600.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MQKSELLCPRIEMASTTTNITKELVAEIPPFLRIFNDGTVERPLQAPAVPPLLDDPQTELSTKDITISHHPTISARLFLP KKLNQDHHVAEKVPILVYFHGGAFILESAFSKSCHDHFKTFVPQTNVLVVCVEYRLAPEHPLPACYHDCWAALQWVSSHS TKSLSNPEPWLIDHGDLNRIFIGGDSAGGNIAHNIAMRAGIEVLPGDVKLSGAFIVHPFFNSSYPIGSEPIIEPEQNIDH KIWNLVYPSAPGGVDNPKLNPVGPGAPSLATLGCSRIIVCVAGKDRFKDRAIWYYEAVKKSGWQGKLELFEEEDEDHIYH WLKPESESAKKLFKRLASFLHEE
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 15 | 343 | 329 | 4.9E-66 | ||
| PANTHER | 21 | 341 | 321 | 2.8E-120 | – | |
| PANTHER | 21 | 341 | 321 | 2.8E-120 | – | |
| SUPERFAMILY | 22 | 342 | 321 | 1.85E-47 | ||
| Pfam | 96 | 319 | 224 | 4.1E-42 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Hydrolase activity | Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3. |
Expression pattern of LotjaGi1g1v0018600.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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