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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0023500 |
| Transcript ID | LotjaGi1g1v0023500.1 |
| Related isoforms 4 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Carboxyl methyltransferase; TAIR: AT5G55250.1 IAA carboxylmethyltransferase 1; Swiss-Prot: sp|Q9FLN8|IAMT1_ARATH Indole-3-acetate O-methyltransferase 1; TrEMBL-Plants: tr|A0A072UXX4|A0A072UXX4_MEDTR Indole-3-acetate O-methyltransferase-like protein; Found in the gene: LotjaGi1g1v0023500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:2837202..2843078) extracted from Lotus japonicus Gifu genome v1.2.
AGCAAATTTGTATTTAAATCAAGCACAAGGGGTGCTAGAACCCAAATACAATGAGAGAAAAAAGAAAGATAAAGAAAAAA GCAAGAACAAGAAACAAGAACCAGCAAAAAGAAACTAGGTGACCAACAACAAAGAAGAAACCCCACGCCACTTACTAACT TAGGTAGCCTAAACCAATCCTGCTGGAACCAAACTAATCCACCCCCACCGCCAGCAGCTTGTATCACATCACAGCAAGAG TCTACAAAGCTGAAAAAACAATCCGTGGGAGAATTCTTCCATTCAAATAGTGAGTTTTGGAATCCCGTCAATTTCGACTG CCAGGAGCGGACTTGAATTAAGTCAAGAATATAAATCCCAGCGACCAAATGAAAGTTTTCTTATGATTATTTCCGGCCTT TTGTGTAGATGTAGCAGCCTAAGCCAAGTAGCCAGCGGAACAAGTTGAAGAAAAGTAATAAACAACCAGAGCTTGTTATC TAATAAGCCAATAATAAGCACAAAACAAAACAAAACAAAAACAAACAAATTAAATAGAACTTGTTCTCTCTATAATTTCT GTTTTTTATAAAGCTATAATTCTTATATTTTTGGATCTTGAGTGGTATATCAATCCAAAGATAGTGTATAATTTGGTGAT CTTGTGGAGTTGGGGTGATCCTAGTTCAGCCGTTTTCAATTTCAGAAGCTAAAAACTTTAAAAGAATAATAATAAACAAA CATGCTATTATTAGTAGCCTTACTCATCCTCTTCTATATATATCAACTCTTTTGCCTCTCAGTTTCCCAATCTTACACTT CCACATACATACTCCTTCTTTTCTCATATATCTTTCACTCTCACATCATCATCACTATTTAATTCTGGCTCCGATGGGAG ACAATGTTGTTGTGTCCAAAATGGAACTTGAGAGGTTGCTTAGCATGAAAGGAGGCAAAGGAGAAGCCAGCTATGCCAAC AATTCCCAAGCTCAGGTACATTTAATTCTCATATACATATACATGTATATGTAGCATCCCTCTTAAGTCTTAACAATTAT CATCATGTTTTGGATATACGTTTAAAATTATCACTATCATCACTTTTCCTCCATCAAAAAACTTTCTAGCAAGAATTTGA TCCTCCCTAAGATATAATTACGGAAAGATTTCTATCATTCAAAATATGTTAAAAAATATTGTGAATGTTTGAGGTTTCTC TGAATCTTCGGTAAGAGAATCTAGACCAATTCCTAGTGATTCTTCTGAAACCACTTACTTTCTTTGACTTGAGAAATTAA AAGGTTTTCAAACACACAAAAAGTTATATATATATAGTTGTTACAATTTGCAAAACAAAATAAGTTTAATATTCTAATAT GGAGTATCTTGCTTAACAAAAAGATTACAAATTTAATGACCCATGACTTCTCACATACATGCAGGCCATACATGCCAAAT CAATGCTTCACCTTCTGAAAGAAACCCTAGATAGAGTTAAGCTTGGAGATGCTGATACACCATTTGTGGTGGTGGACCTG GGTTGTTCATGCGGAAGCAACACCATCAAAGTGGTGGATGTGATCATCAAGCACATCATCAAGCGCTATGAGTCTTTAGG GTGCTTTGACCTACCTGAGTTTTCTGCTTTCTTCTCTGACCTTCCCAGCAATGACTTCAACACTCTCTTTCAGCTCCTTC CTCCTCTTGCCAACTACGGTGTTAGCATGGAAGAGTGCCTCGCTGCCAACAACCACCGCTCCTACTTTGCTGCCGGAGTT CCTGGCTCTTTCTACCGGAGGCTTTTCCCGGCCAAGTCCATTGATGTTTTCCACTCAGCCTTTTCTTTGCACTGGCTATC TCAGGTATACCTATACCTCTGTGTCTTGTTATTTTGTTCAAAGTATTGCTTACTTTTTTCTTTTCAACAAGGCTTCAGTA CTAAATGTTATTGTTAGCAGTAAAATATCGTTTCCCAATTTTTATATTAATACATTAGTCACAACTCTATTGAATCATAT ATGCTTATAAGGATACCAAAATTCTCAAATTTTTCATTGAAAGAATGCTCTTTCATTTTTTAAGAAAAGAAAAATAGTTA GATAGATATATATCTTCTTTTTTCCTAAGCAATTTTTGTTTTAACTTTACTTGCCAGCTCTGTTGGTTAAACTATTACAC AATATTCTAATAATTTTGAATCATTCTATGACTTAAGCTTTCAGTTTTCAGTTTATCTTACTTTTGCCCGTGATCTTTAT AGCGATCACCTTAATTCCTTGAAAATGTTTGAACTTTTAGTGAATTATCACAATTAATTTGATGAATATCTTTTAAGGGA TTTCTCCTTAATTTGTATGACTTTCTTATATGCTTTTACTTTCAATTAACCAAACACTCGAAAGATTCTATATGCATGCA GTCTCTGTTGTACATATGCTGTAGTTTCCACGACAAAATCTAAAAGGGACATTTTCGTTTTCCCACGGATAACATAGTGA GAAAAAACAATTATTAAATTGAAGGCCAAGTCCTTAATTATTTTATGGTCAAAAAGTAAATGCTGCAAATCCATGGTCTA TAGTGTTGACAAAAGGGACCATGTTTTGGGGAAACAATAACGTGCTTGGACAGTAATTTCCAATGCATGCATAGCAAGCA CACAATGTTCTTCATCTTCAATTTTTATAATAATAATACATGGGACCAGCATATAGCTAGAATTTGATTAGGACACATTT GACATCTAAAATTGCACAAACTTTTTTTCATCCTCAATTGTTTTTTTGGTTGGGATAGTCATTTTTTAAATTAAAATCAA TTTAGGAAAATATTTTATGAGTAACTTCTAAGTAATTAATTCTGAAAAAAAAAGAAATTGATTAAGAATGCATCAGCCTT CGAGGAATTAAAGGTAATTATTTTTTAAAAAAAAAGTAGTATACAAAGGTTCACTTTTTTTATTCATTTTTTCTTGTTCC ATCCTTTCTTTGCAGGTCCCTGAGTCTGTATTGGATAAGAGGTCAAGTGCATACAACAAAGGCAGGGTGTTCATTCATGG TGCTGATGAGAGCACAACAAGTGCATACAAAAAGCAATTCCAAACAGACTTGGCAAGCTTCCTGAGCTCAAGGTCAGTGG AGATGAAGAGAGGGGGGTCCATGTTCTTAGTTTGCTTGGGGAGAACCTCAGTGGACCCCACAGACCAAGGTGGGGCTGGC CTTCTTTTTGGGACCCACTTTCAGGATGCTTGGGATGATCTTGTCCAAGAGGTAATTATCATAATCCCAAACATTCCTAT GCATGCTTGTGTGTATGAACAGCACTTCACATATAGACTATCTGCCAATTGGCAGACCAAAAGAAGGTGTTAACACTGTT GATATAAGGGTGGTGATACTGCATAAACATTCAATTTCTTTGAAATATCTTTTAAATATATCATTTTATGACTTCTTAAT CCCACAATATTTTGTAGCAGTTTTTTTAACCACTACAAAGCGGTATGTTCAAAGAATGTTTCAGAAAAGTTGATGAGTAA TTCATAATAATAATGGTCTAGTGTTGTAGTCATCACCACCAGAAATACTTATCATGAACTCTCACTGATCAAGTTTAAAG CAAAATCATTCTAGCCGTTAGTTAACAACACAAACTTGATCAAGTCATCCATTTATTAATCATCATGTCGGCAGAAATAA TAATTAGTTGCCGGATGGTAGTGTCATGTGGTCCGTAACATTGACCAGCAATTATGTTTTGGATATCTAGACTTTAGAGA AAACACAGAATCATACCATAATGGCTTAAAGCTGTACAAAAAAATGTGGTTGGTTCATATTCCCTCCGTTCCAGAAAGTT GGTTGTTTTGCACCATTTTTCATTATCCCAAAATCTTTGTTGTTTTAGAAAACCAATGCATTTTTTTGCTAATTTTTTCT ACCTATACCCTCATTTAATCCATTTTCTCTCACTTATCACCTTTCATATTAACCAACCACAACTCTTCTCTATTAATTAC ATTTTTCTCTATCTAAGTATACTTTAGTAGTTACACATCATACTAGTAAAATTAAATAAGGGCAATCTAGTCAAATTATA CTATCAATAATTGTTTTCTTACTCTTTGTGCCACAACCTTAAATTACAAACTTTCTGGAACGGAGGGAGTATGATACTAC TGGTTTTCTTAAATAAAATTTTGAGTTTGAGGTTTGTTAAAGGAAAAAATTATTCATTAGAAGAACTAATTCTACTGAAA TATAGATGTTTCTATCTCACTTTCGTAAAGTATACTTAAGGTGAAAAGAGAAAAATAAACTATAGACATAATAATTTTTG CATTCATCTGATCAAATTTAAATCTAATGATTGTAGTCTATGGGACCAAAGTACCAAACAATGTCTTGGAACAGAATCAA TGGCATGTACTTACAAGAGTTATCCACTACCATGTTACACATCCAAACAATACTGTAATCAATGAAGTTCAGAGTATAAC TCACCATATAATTAAGGATGTCCTCAGCTTTTAGTACAATCAATAACCAAAACATTTGTCCAAACAAATCTCACTATATA ATTTGAATACATCCTATATCTTCCATTTTTTGTCACATTTTTTTAATTAGAATGATAGATTTACTTATTTATTTTCATTA TTAATATTGTTACTCCTGTACAACAACTTGATTTAGATCACAGGCACATTGGGTGGCATGAGTATTATGACTCTGTTTGC AACTTGTGTTCACAATGATCAATTGCTTCCTTCAAGCTCTTCTAACTATGCATAGTATAGTGTCTTTCTATTCATGAAAT ATAAAGCAAAGTATAAGTAAATGTTTAAAAATCCTTTTACACTTGATTCATAAAAGCCAAAATCAATTTAGGGGAAAAAA TTGTGAGTAGCTTCTATATGTGGGAATTGATTTTGAGGAAAGAGAAACTAATCTAAACATGCTATTGATGCAGGGATTAA TTAGCCGTGAGAAACGAGACAATTTTAACATTCCGGTTTATGCGCCGAGCCTGCAAGACTTTAAGGAGGTGGTTGAAGCT GATGGTTCATTTGCCATAAACAAGCTTGAGGTGTTCAAAGGGGGGAGCCCCCTTGTGGTGAACCAACCTGATGATGCTAG TGAAGTAGGCAGGGCTCTAGCCAACAGCTGCAGGGCAGTGTGTGGTGTGCTTGTTGATGCTCACATTGGTGACAAGCACA GTGAGGAACTCTTTCTTAGAGTAGAGCAAAGAGCTACAAATCAAGCCAAAGAACTCTTAGAGAAACTTCAGTTCTTTCAC ATAGTTGCATCCCTTTCTTTGGTTCAATGAAGAAAAGGAAAAAAAAATGACACAAAAGAAAGAGAAAAGAGAGGTTCACC ACTTCAAGCCTCTTGTTTTGTCCCTCTTTTGTGTGTTGTTTGTGTGTTACATTGCTGACTGGCTGAAGTTACTTTCTACA CATATTTTGCTATTTCAGACTCTATTAACGTGTTAGGATTGGTGGTGACAAACAATACGAAGCATGGTAGCTCCAGAAGC TACACGTTGTAGCTTCTCAGCAGAAGTGATTACGAAGCTTTCCACCGCTGAACCAAACACATTATATGTTTCATTGTATC TGAACTAATTTTGCTTTCCCATAGCATATGATAGTGTCCATATCTTGTGGAAGTTGTATGAATGGAATGATATGCCTTTT GTAACTAACAAGCTGTGTTGTTGCATAGCTATTTGATTGTAGTCACATTTTCCTTTCTTAATTAATACTATTTCACTAGC CAATCTAATAGGTAGGTAAATAATGATTAGCTAATGGTACTAGCTGGCTTTCATCATTCTATCCAGCCACATCAACCATG TTTGGTTGGAAGGAAAAAAACAGAAAACTACACCAAG
CDS sequence (LotjaGi1g1v0023500.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGAGACAATGTTGTTGTGTCCAAAATGGAACTTGAGAGGTTGCTTAGCATGAAAGGAGGCAAAGGAGAAGCCAGCTA TGCCAACAATTCCCAAGCTCAGGCCATACATGCCAAATCAATGCTTCACCTTCTGAAAGAAACCCTAGATAGAGTTAAGC TTGGAGATGCTGATACACCATTTGTGGTGGTGGACCTGGGTTGTTCATGCGGAAGCAACACCATCAAAGTGGTGGATGTG ATCATCAAGCACATCATCAAGCGCTATGAGTCTTTAGGGTGCTTTGACCTACCTGAGTTTTCTGCTTTCTTCTCTGACCT TCCCAGCAATGACTTCAACACTCTCTTTCAGCTCCTTCCTCCTCTTGCCAACTACGGTGTTAGCATGGAAGAGTGCCTCG CTGCCAACAACCACCGCTCCTACTTTGCTGCCGGAGTTCCTGGCTCTTTCTACCGGAGGCTTTTCCCGGCCAAGTCCATT GATGTTTTCCACTCAGCCTTTTCTTTGCACTGGCTATCTCAGGTCCCTGAGTCTGTATTGGATAAGAGGTCAAGTGCATA CAACAAAGGCAGGGTGTTCATTCATGGTGCTGATGAGAGCACAACAAGTGCATACAAAAAGCAATTCCAAACAGACTTGG CAAGCTTCCTGAGCTCAAGGTCAGTGGAGATGAAGAGAGGGGGGTCCATGTTCTTAGTTTGCTTGGGGAGAACCTCAGTG GACCCCACAGACCAAGGTGGGGCTGGCCTTCTTTTTGGGACCCACTTTCAGGATGCTTGGGATGATCTTGTCCAAGAGGG ATTAATTAGCCGTGAGAAACGAGACAATTTTAACATTCCGGTTTATGCGCCGAGCCTGCAAGACTTTAAGGAGGTGGTTG AAGCTGATGGTTCATTTGCCATAAACAAGCTTGAGGTGTTCAAAGGGGGGAGCCCCCTTGTGGTGAACCAACCTGATGAT GCTAGTGAAGTAGGCAGGGCTCTAGCCAACAGCTGCAGGGCAGTGTGTGGTGTGCTTGTTGATGCTCACATTGGTGACAA GCACAGTGAGGAACTCTTTCTTAGAGTAGAGCAAAGAGCTACAAATCAAGCCAAAGAACTCTTAGAGAAACTTCAGTTCT TTCACATAGTTGCATCCCTTTCTTTGGTTCAATGA
Protein sequence (LotjaGi1g1v0023500.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGDNVVVSKMELERLLSMKGGKGEASYANNSQAQAIHAKSMLHLLKETLDRVKLGDADTPFVVVDLGCSCGSNTIKVVDV IIKHIIKRYESLGCFDLPEFSAFFSDLPSNDFNTLFQLLPPLANYGVSMEECLAANNHRSYFAAGVPGSFYRRLFPAKSI DVFHSAFSLHWLSQVPESVLDKRSSAYNKGRVFIHGADESTTSAYKKQFQTDLASFLSSRSVEMKRGGSMFLVCLGRTSV DPTDQGGAGLLFGTHFQDAWDDLVQEGLISREKRDNFNIPVYAPSLQDFKEVVEADGSFAINKLEVFKGGSPLVVNQPDD ASEVGRALANSCRAVCGVLVDAHIGDKHSEELFLRVEQRATNQAKELLEKLQFFHIVASLSLVQ
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 7 | 382 | 376 | 6.5E-206 | – | |
| PANTHER | 7 | 382 | 376 | 6.5E-206 | ||
| SUPERFAMILY | 10 | 381 | 372 | 7.95E-113 | ||
| Pfam | 58 | 381 | 324 | 2.5E-105 | ||
| Gene3D | 60 | 310 | 251 | 5.2E-113 | – | |
| Gene3D | 244 | 359 | 116 | 5.2E-113 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Methyltransferase activity | Catalysis of the transfer of a methyl group to an acceptor molecule. |
Expression pattern of LotjaGi1g1v0023500.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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