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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0023500 |
| Transcript ID | LotjaGi1g1v0023500.5 |
| Related isoforms 4 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Salicylate O-methyltransferase; TAIR: AT5G55250.1 IAA carboxylmethyltransferase 1; Swiss-Prot: sp|Q9FLN8|IAMT1_ARATH Indole-3-acetate O-methyltransferase 1; TrEMBL-Plants: tr|W9RBB1|W9RBB1_9ROSA Indole-3-acetate O-methyltransferase 1; Found in the gene: LotjaGi1g1v0023500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:2840174..2842511) extracted from Lotus japonicus Gifu genome v1.2.
CAGGTCCCTGAGTCTGTATTGGATAAGAGGTCAAGTGCATACAACAAAGGCAGGGTGTTCATTCATGGTGCTGATGAGAG CACAACAAGTGCATACAAAAAGCAATTCCAAACAGACTTGGCAAGCTTCCTGAGCTCAAGGTCAGTGGAGATGAAGAGAG GGGGGTCCATGTTCTTAGTTTGCTTGGGGAGAACCTCAGTGGACCCCACAGACCAAGGTGGGGCTGGCCTTCTTTTTGGG ACCCACTTTCAGGATGCTTGGGATGATCTTGTCCAAGAGGTAATTATCATAATCCCAAACATTCCTATGCATGCTTGTGT GTATGAACAGCACTTCACATATAGACTATCTGCCAATTGGCAGACCAAAAGAAGGTGTTAACACTGTTGATATAAGGGTG GTGATACTGCATAAACATTCAATTTCTTTGAAATATCTTTTAAATATATCATTTTATGACTTCTTAATCCCACAATATTT TGTAGCAGTTTTTTTAACCACTACAAAGCGGTATGTTCAAAGAATGTTTCAGAAAAGTTGATGAGTAATTCATAATAATA ATGGTCTAGTGTTGTAGTCATCACCACCAGAAATACTTATCATGAACTCTCACTGATCAAGTTTAAAGCAAAATCATTCT AGCCGTTAGTTAACAACACAAACTTGATCAAGTCATCCATTTATTAATCATCATGTCGGCAGAAATAATAATTAGTTGCC GGATGGTAGTGTCATGTGGTCCGTAACATTGACCAGCAATTATGTTTTGGATATCTAGACTTTAGAGAAAACACAGAATC ATACCATAATGGCTTAAAGCTGTACAAAAAAATGTGGTTGGTTCATATTCCCTCCGTTCCAGAAAGTTGGTTGTTTTGCA CCATTTTTCATTATCCCAAAATCTTTGTTGTTTTAGAAAACCAATGCATTTTTTTGCTAATTTTTTCTACCTATACCCTC ATTTAATCCATTTTCTCTCACTTATCACCTTTCATATTAACCAACCACAACTCTTCTCTATTAATTACATTTTTCTCTAT CTAAGTATACTTTAGTAGTTACACATCATACTAGTAAAATTAAATAAGGGCAATCTAGTCAAATTATACTATCAATAATT GTTTTCTTACTCTTTGTGCCACAACCTTAAATTACAAACTTTCTGGAACGGAGGGAGTATGATACTACTGGTTTTCTTAA ATAAAATTTTGAGTTTGAGGTTTGTTAAAGGAAAAAATTATTCATTAGAAGAACTAATTCTACTGAAATATAGATGTTTC TATCTCACTTTCGTAAAGTATACTTAAGGTGAAAAGAGAAAAATAAACTATAGACATAATAATTTTTGCATTCATCTGAT CAAATTTAAATCTAATGATTGTAGTCTATGGGACCAAAGTACCAAACAATGTCTTGGAACAGAATCAATGGCATGTACTT ACAAGAGTTATCCACTACCATGTTACACATCCAAACAATACTGTAATCAATGAAGTTCAGAGTATAACTCACCATATAAT TAAGGATGTCCTCAGCTTTTAGTACAATCAATAACCAAAACATTTGTCCAAACAAATCTCACTATATAATTTGAATACAT CCTATATCTTCCATTTTTTGTCACATTTTTTTAATTAGAATGATAGATTTACTTATTTATTTTCATTATTAATATTGTTA CTCCTGTACAACAACTTGATTTAGATCACAGGCACATTGGGTGGCATGAGTATTATGACTCTGTTTGCAACTTGTGTTCA CAATGATCAATTGCTTCCTTCAAGCTCTTCTAACTATGCATAGTATAGTGTCTTTCTATTCATGAAATATAAAGCAAAGT ATAAGTAAATGTTTAAAAATCCTTTTACACTTGATTCATAAAAGCCAAAATCAATTTAGGGGAAAAAATTGTGAGTAGCT TCTATATGTGGGAATTGATTTTGAGGAAAGAGAAACTAATCTAAACATGCTATTGATGCAGGGATTAATTAGCCGTGAGA AACGAGACAATTTTAACATTCCGGTTTATGCGCCGAGCCTGCAAGACTTTAAGGAGGTGGTTGAAGCTGATGGTTCATTT GCCATAAACAAGCTTGAGGTGTTCAAAGGGGGGAGCCCCCTTGTGGTGAACCAACCTGATGATGCTAGTGAAGTAGGCAG GGCTCTAGCCAACAGCTGCAGGGCAGTGTGTGGTGTGCTTGTTGATGCTCACATTGGTGACAAGCACAGTGAGGAACTCT TTCTTAGAGTAGAGCAAAGAGCTACAAATCAAGCCAAAGAACTCTTAGAGAAACTTCAGTTCTTTCACATAGTTGCATCC CTTTCTTTGGTTCAATGA
CDS sequence (LotjaGi1g1v0023500.5) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAAGAGAGGGGGGTCCATGTTCTTAGTTTGCTTGGGGAGAACCTCAGTGGACCCCACAGACCAAGGTGGGGCTGGCCT TCTTTTTGGGACCCACTTTCAGGATGCTTGGGATGATCTTGTCCAAGAGGGATTAATTAGCCGTGAGAAACGAGACAATT TTAACATTCCGGTTTATGCGCCGAGCCTGCAAGACTTTAAGGAGGTGGTTGAAGCTGATGGTTCATTTGCCATAAACAAG CTTGAGGTGTTCAAAGGGGGGAGCCCCCTTGTGGTGAACCAACCTGATGATGCTAGTGAAGTAGGCAGGGCTCTAGCCAA CAGCTGCAGGGCAGTGTGTGGTGTGCTTGTTGATGCTCACATTGGTGACAAGCACAGTGAGGAACTCTTTCTTAGAGTAG AGCAAAGAGCTACAAATCAAGCCAAAGAACTCTTAGAGAAACTTCAGTTCTTTCACATAGTTGCATCCCTTTCTTTGGTT CAATGA
Protein sequence (LotjaGi1g1v0023500.5) extracted from Lotus japonicus Gifu v1.2 Proteins.
MKRGGSMFLVCLGRTSVDPTDQGGAGLLFGTHFQDAWDDLVQEGLISREKRDNFNIPVYAPSLQDFKEVVEADGSFAINK LEVFKGGSPLVVNQPDDASEVGRALANSCRAVCGVLVDAHIGDKHSEELFLRVEQRATNQAKELLEKLQFFHIVASLSLV Q
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 1 | 87 | 87 | 1.5E-41 | – | |
| PANTHER | 1 | 159 | 159 | 3.5E-85 | – | |
| PANTHER | 1 | 159 | 159 | 3.5E-85 | ||
| Pfam | 1 | 158 | 158 | 1.7E-37 | ||
| SUPERFAMILY | 1 | 158 | 158 | 2.99E-36 | ||
| Gene3D | 21 | 136 | 116 | 1.5E-41 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Methyltransferase activity | Catalysis of the transfer of a methyl group to an acceptor molecule. |
Expression pattern of LotjaGi1g1v0023500.5, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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