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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0026700 |
| Transcript ID | LotjaGi1g1v0026700.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | GDP-L-galactose phosphorylase 1; TAIR: AT4G26850.1 GDP-L-galactose phosphorylase 1; Swiss-Prot: sp|Q8RWE8|GGAP1_ARATH GDP-L-galactose phosphorylase 1; TrEMBL-Plants: tr|G7K3M6|G7K3M6_MEDTR GDP-L-galactose phosphorylase; Found in the gene: LotjaGi1g1v0026700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:3220862..3224744) extracted from Lotus japonicus Gifu genome v1.2.
TAACTCTTATCACTTAAACTAACTTTCGGTCACTTATCTCATTTCGAGTCTTGTACCGGTTCGTTAGTGTGGTCCGGTCC CTCGCAGCCAAATCATAGAAAAGTGAGAAGAAAGCAAAGAACTCACCATGTGTGAAAGCACCACCACCACTCTCTTTCGA TAATTGTCTCTTCTCTCGTCTACTCTGTTTCCTTCCTCACCATTCGTTAACCACCCTTCCTTCCTCACTCCTAGTACAAA TTCACAACCACATTTCATCTTCCTCTTCCTTATCTATATAACCAACCCAATCTCTTCCTCTAATCCCCACCAACCACCCC ATCACAAAAACCCTCCAAAGCTTGAAACTTTCCTCCATTTTGCATGCTGGGTCGCTTGCGATTTCAAGTTTTGCAAAGCC AAGTTTCCAGGTTCGTAAACAAGAAGAAAGTGGAAGAAAAAAAATCAGATTTTTTTATCTGGGTTTGGGTTAAAACCCGG TTTGACGCATTGTAGACATCACGGCTATTCTCAGAGATTCTCGGATTCTCTTTCATGGCCGAACTGTTCGACGTAAGGGT GGTTGTGTGACTACTACTGCCACCAATCCTGCGCCGCACGGTGGCCGTGGTGCTTCGCCTTCAGAAGGTGGTAGCCCCTC TGACCTTCTCTTCCTTGCTGGTGGTGGTGCTGGTGCTTTCTTCTTCTTCTTCTCTGTTGTAGTTTGCTAGATTAGTCTTT TGTCAGTGTAAGCTATTAAGGTTAGGATTCTCAAAGAGATTTTTACTAAGATCAAGTTGAACAAGGTGTTTGTTGTTTAG TTTGGTGAAAATGATGTTGAAAATTAAGAGGGTTCCTACTGTTGTTTCCAATTATCAAAAAGAGGAGGCTGCTGGGGGTT GTGGTAGAAACTGCCTCAAAAGTTGCTGCATTCAAGGTACTAATTAGACCAATTGATTTCTATGTTAATTTTTTATTATG TTTGTGATTTTTGTGGTTAGCATGCATGTAATTTTGGTTTTGTTTAATCTAAAATTTACTATTTGTTTTCTTAACAGGTG CAAAGCTACCTTTGTATGCTTTCAAAAAGATCAACAAGGTTACTGAAAAGGATTTGGACCTCCATGAATCTGGGGAGCCT CCTGTGGCCTTTCTGGAATCGCTTATTCTTGGGGAGGTACTTATGGAATTTTGATGATGGAGGAAGTTGAACAATTTTTT GTTTCTCAAGTTTTATTGTTATGTTTTGTGTTAATGGTTGTTTACCTTTTGATTGCAGTGGGAAGATCGCATGCAGAGAG GACTTTTTCGCTATGATGTTACGGCCTGTGAAACCAAGGTTTGATTCTTTGATTCGTTTTCCTTTTTTCCCCTGTCTATG TATGGTGTTAGTATTCTTTTGGGGATGCATGGATATGGAATCAGAATCCTCTCATCTGTAGTGTATCTCTCTCTTCATAC CTATTAAATAGTTGGTAACCTATATTTATGAAGAAAGAGATAGACGCAAAGTTTCACATGACACTATTGTGTGACATCAA AGGATCCTAATTCATGGATACGGTATATGTCTATATGAGTTTAGTTTCATGTGTTTTTGTGGTAATTTTTTGGTATAGGT GATTCCTGGTGAATATGGTTTCGTTGCTCAGCTTAACGAGGGTCGTCACCTCAAGAAGAGGCCAACTGAATTCCGAGTTG ATAAGGTCCTCCAGCCCTTTGATGAAACCAAATTCAACTTCACTAAAGTTGGGCAGGAGGAGGTCCTCTTTCAATTTGAA GCTAGTGATGATGGTGAAGTCCAGTTCTTTCCAAATGCTCCAATTGATGTTGACAATTCTCCCAGCTTTGTTGCTATCAA TGTACGACTCTTGCCTTTTGTTCAAATTTTGCATTTGCTGGTTCATTAGGCTAAAGGTGTTTTATCTGAGGGTGTTTCGT GTTTGATTATTTTTAACAGGTTAGTCCTATTGAGTATGGGCATGTTTTGCTGATTCCGCGCATTTTTGAGTGTTTGCCTC AAAGGATTGACCGCGAGAGCTTCTTGGTTGCACTTCATATGGCAGCAGAAGCTAATAACCCATATTTCCGACTTGGTTAC AACAGCTTGGGAGCTTTTGCAACTATTAACCATCTCCACTTCCAGGTACTTCCCTCACCCTGAGCTAGCTTTTGGAGTAG AGTTAGGCTGCCCGAATTCTAAGAAATTTGACGGTTAATTACTTTGTTATAAGATTTTAATTTGTTGTTTATGATATTTT CAGGCTTATTATTTGGCTCTGCCCTTTCCCATTGAGAAGGCTCCTACTAAGAAAATTGCAAGCTTAAATGGTGGTGTGAA GATATCTGAATTGTTGAAGTATCCGGTTAGAGGCCTTGTCTTTGAGGGTGGTGATACTTTGGAAGATTTATCAAACATTG TTTCTGATGCTTGCATCTCCCTTCAAAACAACAACGTACCTTACAATGTTCTGATTTCTGACTGTGGAAGGCAAGTGTTT CTGTTACCTCAGGTAAATGATCCCAAACTCATTTAACTTCGTGCAGGTTTGGATATTCATTTACAATTGATTCTAAAGGC AAAATCAATCATGGGAAGAAACTTATGTGAGTAGCTTTTATGCTTGTTGGATCAAAATCAGAATTGATTTTGGATAATCA GAATTGATTTTGGATAGAATTGATATTGGTAAAATTAATTATGAGAGTTGATTGAAAGTAAAATGATTTATGTTTGGATA CGTTTATGGGAAAAGTGATGATTCTATAGTTAATGTTGTGAAATAAGTTATAAAATATCACAATTGATTTTATCCCCCTG CTGCTTAAATTACTCTCTCGAGCTTATCCGCAGAATTGACTAAAAATAAGCTGATCCAAACATGCTAGATTAGTTTTCCA AATTCACTTCCGTTAACTGCATGGGTACTCATCAAATAGATTTACAGTGTTATGCAGAGAAACAAGCTCTTGGAGAAGTG AATGCTGAGCTGCTTGACACCCAAGTGAACCCTGCTGTGTGGGAAATTAGTGGACATATGGTTTTAAAGAGGCAAAAGGA TTATGATGAGGCATCTGAAGCCAATGCTTGGAAGCTTCTTGCAGAGGTTTCACTCTCTGCAGAGAGGTTTCAAGAAGTGA ACGCTTTTGTTTTTGAAGCCATTGCTTTAGATGTCAATGTTCATTGTCTTCCAGAAGATGTAGCAGTCAACTCAAACACA CACCCTTCTGTGGTGGCTGGTTCACTAGAATGTGTTGTTCTGCAGTAACAAATGCAGTGATTCTGCGGTATTAAAAGAAC TTCTGAATTATGTCACAGTTGAAATAAGTACCATCTATGGTAACAGTTTCCTATGTTGTGCCTATTAAGATGTATTCAAG GTTGTTGTCTATAGTTAGTGCTTGGATGTATGTTTGGGTCCTTTCACCTAGCTGAATAACATGTATCTGTTCCTATGGAT GATAAATGGTATATTTGTTATGTTTATGGATGTCAATTATTTAGAATTTGATTTGATGCAAATCTTTTTACACCTTGATA GTATGTTTGTATCAGCTTGTTTTTTCTTCTGAATCAATTTTGACATTCAGAAGCTACCTATAGGCTTATACCCCGAATTG ATTTTGGTTGTAGTATCAATTCTAGAATGATTTCCAAACATGTATGATTCTCTTCCAATATCTTTTGGCTGCGCTAGATT TTTATTTGGTCTTTGAATGGAACCTGTTGCATCATAGTATAATGTCAAAGATTCCATTCCATCCACTATAATTGTAGGTA TAATATATAACAAGAGTAGACCCACAAGTTTCATGGGATAGACAAAAAATACATTTCTTTGGTGGAGGCTTTCTTTTAAG AAGTGTTAGTATATTTTAAAAGCTTCAAAAAATAAAATTGGTG
CDS sequence (LotjaGi1g1v0026700.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGATGTTGAAAATTAAGAGGGTTCCTACTGTTGTTTCCAATTATCAAAAAGAGGAGGCTGCTGGGGGTTGTGGTAGAAA CTGCCTCAAAAGTTGCTGCATTCAAGGTGCAAAGCTACCTTTGTATGCTTTCAAAAAGATCAACAAGGTTACTGAAAAGG ATTTGGACCTCCATGAATCTGGGGAGCCTCCTGTGGCCTTTCTGGAATCGCTTATTCTTGGGGAGTGGGAAGATCGCATG CAGAGAGGACTTTTTCGCTATGATGTTACGGCCTGTGAAACCAAGGTGATTCCTGGTGAATATGGTTTCGTTGCTCAGCT TAACGAGGGTCGTCACCTCAAGAAGAGGCCAACTGAATTCCGAGTTGATAAGGTCCTCCAGCCCTTTGATGAAACCAAAT TCAACTTCACTAAAGTTGGGCAGGAGGAGGTCCTCTTTCAATTTGAAGCTAGTGATGATGGTGAAGTCCAGTTCTTTCCA AATGCTCCAATTGATGTTGACAATTCTCCCAGCTTTGTTGCTATCAATGTTAGTCCTATTGAGTATGGGCATGTTTTGCT GATTCCGCGCATTTTTGAGTGTTTGCCTCAAAGGATTGACCGCGAGAGCTTCTTGGTTGCACTTCATATGGCAGCAGAAG CTAATAACCCATATTTCCGACTTGGTTACAACAGCTTGGGAGCTTTTGCAACTATTAACCATCTCCACTTCCAGGCTTAT TATTTGGCTCTGCCCTTTCCCATTGAGAAGGCTCCTACTAAGAAAATTGCAAGCTTAAATGGTGGTGTGAAGATATCTGA ATTGTTGAAGTATCCGGTTAGAGGCCTTGTCTTTGAGGGTGGTGATACTTTGGAAGATTTATCAAACATTGTTTCTGATG CTTGCATCTCCCTTCAAAACAACAACGTACCTTACAATGTTCTGATTTCTGACTGTGGAAGGCAAGTGTTTCTGTTACCT CAGTGTTATGCAGAGAAACAAGCTCTTGGAGAAGTGAATGCTGAGCTGCTTGACACCCAAGTGAACCCTGCTGTGTGGGA AATTAGTGGACATATGGTTTTAAAGAGGCAAAAGGATTATGATGAGGCATCTGAAGCCAATGCTTGGAAGCTTCTTGCAG AGGTTTCACTCTCTGCAGAGAGGTTTCAAGAAGTGAACGCTTTTGTTTTTGAAGCCATTGCTTTAGATGTCAATGTTCAT TGTCTTCCAGAAGATGTAGCAGTCAACTCAAACACACACCCTTCTGTGGTGGCTGGTTCACTAGAATGTGTTGTTCTGCA GTAA
Protein sequence (LotjaGi1g1v0026700.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MMLKIKRVPTVVSNYQKEEAAGGCGRNCLKSCCIQGAKLPLYAFKKINKVTEKDLDLHESGEPPVAFLESLILGEWEDRM QRGLFRYDVTACETKVIPGEYGFVAQLNEGRHLKKRPTEFRVDKVLQPFDETKFNFTKVGQEEVLFQFEASDDGEVQFFP NAPIDVDNSPSFVAINVSPIEYGHVLLIPRIFECLPQRIDRESFLVALHMAAEANNPYFRLGYNSLGAFATINHLHFQAY YLALPFPIEKAPTKKIASLNGGVKISELLKYPVRGLVFEGGDTLEDLSNIVSDACISLQNNNVPYNVLISDCGRQVFLLP QCYAEKQALGEVNAELLDTQVNPAVWEISGHMVLKRQKDYDEASEANAWKLLAEVSLSAERFQEVNAFVFEAIALDVNVH CLPEDVAVNSNTHPSVVAGSLECVVLQ
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 2 | 427 | 426 | 3.3E-257 | – | |
| PANTHER | 2 | 427 | 426 | 3.3E-257 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | GDP-D-glucose phosphorylase activity | Catalysis of the reaction: GDP-D-glucose + phosphate = D-glucose-1-P + GDP. |
Expression pattern of LotjaGi1g1v0026700.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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