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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0041200 |
| Transcript ID | LotjaGi1g1v0041200.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Transcription factor, putative; TAIR: AT3G58850.1 phy rapidly regulated 2; Swiss-Prot: sp|Q9LXR7|PAR2_ARATH Transcription factor PAR2; TrEMBL-Plants: tr|I3SX63|I3SX63_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0041200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:5668244..5670476) extracted from Lotus japonicus Gifu genome v1.2.
TTCTTCTCCATGGATATCTAAAATGGTAACAATCGGAAGATATGAGTCGGGAGGTGAAGATTTAGGGATCAATTCATAAA GAGTAAATTTGACCGACAAAATCATTAAGTATAATAACACTAATAGGTAATTGATTTAAGTGGTACATCATTAATTTTCT TAAGTGCCTTTGTCGACATTGCAGTAATCTCTAGAATTTAGACATTGCATCACACCTAGACACTTAACCTAGCTAGTGAT AAAAACAATGTCGACAAACCTAGCTAGTTATCTACTTAATTAAGGCTACATTGCACTGTGATTTGGTTCAATCTATATAT CTAATCTCAAAACTAAGAAACCAAAGCAAGGAAAGGTAAAAAGAAAACAAATTGACAAGGTAGAGAGACTAAGGCACGCT CTTGTTTTGGAGAGTGAGGTTCACACCACACACCACCACATTACTCCAATCCAAAACTTAGGGGCTTCTTGTATCGTGGC CAAAACCAGTGGGACCAGCTTCGTTGTCATTGACATTTCTAGAGCTCAACAATAATTTAACATCTTCCTCTCCTTCACCT CACTCCTTCATCATCTTCACAACAACACATCTTTCCTCATAGATATAACTCCCAACATAACACTCACACACACACAACAT TCTCTTTATTTCTCTTCCTCTCAATTTCTCACTATCTCTCATTTCTCAATCCTCACCACTACTGTATATATATAATTATA TAATATATACACACACACTCACACATGGAAGATGAAAACACAGAAACAGAGATAAGCACACCTGCATTTCTGAGGAAAAC AGAGCAGGACTCTGCCATGGTGGCTCAGAAATCCTTGCATGTGTTGAGGAGAAGCTGCAGGAAGCGGTGGAGAGAGGCGA AGAAGGAAGTGGCTGTGAAAGAGGTGAAGGGTGTTGAGAAAGGAGAAGAAGATGATCAAGAGGAGGAGGATAGGGAAGAG GTGGAGATGAAGATTCATGCATTGCAGAGGATTGTGCCTGGTGGGGAGGAACTTGGTGGGGACAAGCTTTTTGATGAGAC TGCTGGGTATATAATGGCCTTGCAGCACCAAGTCAAAGCTTTGAGGGCTCTTACTGGCTTCTTTGAGAAGTTGGAGAAGG AGAAGACAAGGTTTGGAGGTTGATCATGAGGATGGTGATGGATCTGCTTCATCAAAGTGGGTATTTATCCAAGTCTCACA ACAAGTAGTATGAAGAGGAAGGATTAGAGAAAGTAGAGAAAGTGAGTAATCGTCCAAGTTCCACATCGAGTAGTATGAAG AAGAAAGAATCGCTTTGGAGATGATCATGATGATGAATCAATCCATGGTGGAAGAAACACCTTAGGTTAGGTTCTTTTGG TTTTTCCCACAAACCCATCAGTTAGATTTTTTTATTTTCTTTTTGATTTTTTTGTTGTACTTTTGGTTGGGATCAAGGAA AAAAATTCCAATTTTCTTAGGTTTATCATTTTTTTATCTTTTTTTTTTGAAGTTTTTCTCTGTTTTATGACTTTATCTAT ATATATCTTGACAGTTGATATTCTCTCTTTCTTGGCAGAAAGTAGTTTGGAAATTGGGTTAGTGAGTTAGAATTGCTCAA GTAGTTATGAATTTTGGGCAATTGTGGAAGGAATCTATTCTGTGAGTGATCTCTGGAGTGAAGTTAGAATGGGTGAGAGT TCATGGTGTTATGATGTGCCCTCTCTGTTGTTGCTGGTGTATGTGGACTTTGGCTGAGTTTTCATTTGGTCTGGTGGGCC AGCCAATTGGATCTAAAAATCTGGATGAGATCAGACACATTTTCAAAAGTAACATGGCACACACACATGTTGTTCATTGG TCACTTTCTCTTTATTTTGTTGTGAAAACTTTGTTTTGGAGATTTTGGAATAGGGTTGTTTGACTTTCTTGGCTGTTAGC CATTACTACCACAATGACTTGGACTTAGGATATAGTCATATAACATGTTAGAATCAGTTTTGAAATCTTAGTTTTCTCCA CATAATTGATTCTGATTTAAGGGTTTTCAAACATGTACTTTCAAGGGTTATAAAGTTCACATGATTTCTTTTGTCATCCA AGGATTATCTTCCTTAATTTAATTAGATAAAATCACACTTTGGAGAAGCCAAGACATACACATATTGGGAGATTGATGAC TTTTAACTATCTTGCCTTGAGTGTATGTTTCAAAGATGGAGTAGAACTTAATCATTAACATTAGAAAAGTGCG
CDS sequence (LotjaGi1g1v0041200.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAAGATGAAAACACAGAAACAGAGATAAGCACACCTGCATTTCTGAGGAAAACAGAGCAGGACTCTGCCATGGTGGC TCAGAAATCCTTGCATGTGTTGAGGAGAAGCTGCAGGAAGCGGTGGAGAGAGGCGAAGAAGGAAGTGGCTGTGAAAGAGG TGAAGGGTGTTGAGAAAGGAGAAGAAGATGATCAAGAGGAGGAGGATAGGGAAGAGGTGGAGATGAAGATTCATGCATTG CAGAGGATTGTGCCTGGTGGGGAGGAACTTGGTGGGGACAAGCTTTTTGATGAGACTGCTGGGTATATAATGGCCTTGCA GCACCAAGTCAAAGCTTTGAGGGCTCTTACTGGCTTCTTTGAGAAGTTGGAGAAGGAGAAGACAAGGTTTGGAGGTTGA
Protein sequence (LotjaGi1g1v0041200.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MEDENTETEISTPAFLRKTEQDSAMVAQKSLHVLRRSCRKRWREAKKEVAVKEVKGVEKGEEDDQEEEDREEVEMKIHAL QRIVPGGEELGGDKLFDETAGYIMALQHQVKALRALTGFFEKLEKEKTRFGG
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 19 | 125 | 107 | 9.3E-35 | – | |
| PANTHER | 19 | 125 | 107 | 9.3E-35 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi1g1v0041200.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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