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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0049800 |
| Transcript ID | LotjaGi1g1v0049800.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | MLP-like protein; TAIR: AT5G28010.1 Polyketide cyclase/dehydrase and lipid transport superfamily protein; Swiss-Prot: sp|Q941R6|MLP31_ARATH MLP-like protein 31; TrEMBL-Plants: tr|I3SQK0|I3SQK0_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0049800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:6907566..6908941) extracted from Lotus japonicus Gifu genome v1.2.
TATTATTTCTCAATCCTCTATTCTCTTCATTTCTATTTTTTTTTTCAGCGCCTATATACCCCCTTAAAAAGGGTGTCCAT CCATCATTTTCTATATAAGGCTGCATACCCTTCCTCATCTCTCATCATCACAACTTGTTTGTTCCATTAACATCCTCCTT CTTTATATTACTTAGCTTGTTTTTTCTCCAGTCATGGTACTTGCTGGTAAGCTCAGTACTGAAATTGGGATCAAATCCCC ATCTGTCAAATTCTTCAACCTCTTCGCAACGCAGCTTCACGATGTTCAAAACCACTGCGAGAGAGTGGTTCAAACCAAGC TTCATGAAGGTGACTGGCATGGCGTAGGCGTTGGTTCTGTTAAACACTGGACTAATGTTATAGGTACGTAATCAAGTTTT AGAATTAACATATATAAATATGAACTAATCTTAATAAATTGCGAGTATCCCATCTATTTGGTGGTTTATGTGTATGAATT TCTTCTTTAAGTTTGTTTGGATACGTACCAAAATTATTTATTGAAGCTTATCTGCTAAAAAAATATTAAATTAAATAAGC TCAAATAACTATTCTTTGGTCTAATCCAATAACAGGTTCTATGTTTATTTTTATTTTCTATTTCTATAATAAATTAAATC TCATTTTTTGCTTTGATTTGATCTTAATTAATTATATTGTGAAACATCATCAGATGGCAAGGCCATAACATTGGAGGAGC GTATTGAAGCCATTGATGAAGAGAAGAAAACAATCAAACACAGCATCTATGGTGGAGATATCAGTCCTCACTATAAGACT TTTACGCTCATCCTTCAAGTGATTGATAAGAATGATGGCGGTGATGCTGTTGATGTTGTTAAATGGACTATTGAATATGA GAAGCTCGATGAGGATATTGAACCTCCTCATGGCTGGATGGAATTCCTGAATAAAGGCACTAGAGACATTGATGCTAATC TTCTGAAGGCATAAAGAGTTACATGGAGATCTTCTGATGTAATTTGGTCTCCATATATATAGTCCATGTTCGTTTCCTTT GTTTGTATGGAATAAAGATGCATATGCATATCTCAGTGATGTATGGAAGAAAAATGTGTTGAATTATGTTTAGAGGTTCT TGATAATGTTATTAAATAAATGTGCAGTCTAGTCTAATCACATCAAGTAAATATAAGATAAAATTAGTTTAGTTTTAGAT GATCCAGGAATATTTCAACACATGTCAAAATATTACAAGACTATCTAAATTAGAATGATTTTACTTCATATTTACTTAGA GTGATTATAAACCCATAAATAAATGGATATTTCTATGTGTTTTTTTTCTGAATTGTTTTAAGTTGATTAGCCAAATCTTC ATTCAGTGAAATGGAG
CDS sequence (LotjaGi1g1v0049800.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGTACTTGCTGGTAAGCTCAGTACTGAAATTGGGATCAAATCCCCATCTGTCAAATTCTTCAACCTCTTCGCAACGCA GCTTCACGATGTTCAAAACCACTGCGAGAGAGTGGTTCAAACCAAGCTTCATGAAGGTGACTGGCATGGCGTAGGCGTTG GTTCTGTTAAACACTGGACTAATGTTATAGATGGCAAGGCCATAACATTGGAGGAGCGTATTGAAGCCATTGATGAAGAG AAGAAAACAATCAAACACAGCATCTATGGTGGAGATATCAGTCCTCACTATAAGACTTTTACGCTCATCCTTCAAGTGAT TGATAAGAATGATGGCGGTGATGCTGTTGATGTTGTTAAATGGACTATTGAATATGAGAAGCTCGATGAGGATATTGAAC CTCCTCATGGCTGGATGGAATTCCTGAATAAAGGCACTAGAGACATTGATGCTAATCTTCTGAAGGCATAA
Protein sequence (LotjaGi1g1v0049800.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MVLAGKLSTEIGIKSPSVKFFNLFATQLHDVQNHCERVVQTKLHEGDWHGVGVGSVKHWTNVIDGKAITLEERIEAIDEE KKTIKHSIYGGDISPHYKTFTLILQVIDKNDGGDAVDVVKWTIEYEKLDEDIEPPHGWMEFLNKGTRDIDANLLKA
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 156 | 156 | 1.1E-65 | – | |
| SUPERFAMILY | 1 | 155 | 155 | 7.56E-34 | – | |
| PANTHER | 1 | 156 | 156 | 1.1E-65 | – | |
| Gene3D | 1 | 156 | 156 | 2.3E-40 | ||
| SMART | 2 | 156 | 155 | 2.0E-39 | ||
| Pfam | 3 | 155 | 153 | 4.5E-41 | ||
| CDD | 5 | 151 | 147 | 1.50698E-28 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Defense response | Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack. |
Expression pattern of LotjaGi1g1v0049800.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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