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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0079700 |
| Transcript ID | LotjaGi1g1v0079700.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Nematode resistance HSPRO2-like protein; TAIR: AT2G40000.1 ortholog of sugar beet HS1 PRO-1 2; Swiss-Prot: sp|O04203|HSPR2_ARATH Nematode resistance protein-like HSPRO2; TrEMBL-Plants: tr|V7B7J1|V7B7J1_PHAVU Uncharacterized protein; Found in the gene: LotjaGi1g1v0079700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:11508087..11511348) extracted from Lotus japonicus Gifu genome v1.2.
ATTTTACTCTACCAAAATTGATGACACTCGATACTACCATATACGATTCTTCTATCCCCTCTAGTATATATAGTGCACCA TATATACCAATAGAAATGTGAAATGCATGCGTTTGCAAAGAATAAAGAGATACTTCACATAAATTCCCGTAGGATACGCA CAAAATACAAATTGCATGGGTGGTAATGGTAGCATTTGGATAACTTGGCTGACTCAAAGAATTTTTGTTATCATCTACGT ACAAGGAAGGGGCGAATGATAGAGTTGGATATTTGAGTGGGATTCCAAATGAAAAGTGCCACACTTGGAGCCAAAAAAAC CCAACCATTATAGAATATGTGTGGATCTCATTCTCAAGTTAAATAGAAATGCATGTTTCACAATAAATTGAAAAATTAAA AAAGATCTCAATGGACTGGTCAGTGGTCACAATGTCATCTAGAGGGATCGAAAGAGCATAGGAGTTTCTAACGCGTGGTA GCTGCTAAAGAAAAGAAGGCCCGATTTCAACGACTCCACTACTAATATTTAGATTAGATTCCAAACAAAGAAAACCGGTG TTCTACTTCAACTTCCTTCCTTGTCCTTTTACGTTAGGTGTTATTGTTCTTGTTGTTATGGATAAGCTCCATGTGATGCT CCAGTTCAATTCCAAATTTCCCTTTTTTCCTCTCACATTTTTATTCATTTAATTTTATAATTAATAAATGATAAATCCAT ACATATCTAATTGGATTAATAGCCTATTAAATAATTTATTACATGTGGAATAAATCAGACAGTTCGGCAGGGTTTATGGT GTGATTTGTCAAAGACCTGGCCTGATCCGTTTATTAAAAAGGTCAAGTTTAGACTTTTTAAAAAAATCTGATTAGTTAAA AAAAATTGTGTCCTGCCAAAAAGAAAACTTGTTTAATTGGTCTGATGAGCCGATCTATTTCTATAATATTATTATTGCTA TTATTTAATATATAATATATATTATACTATTTTAATTAATTTTTTTATAACCCATAATATTTTTTTTAATAGGGTAACGA TACGTAGGAATTCTTATTAGTCTGTTAGCCTAACGACTTTTTTAAAATGTTATTTTCTCTTGAATGGACTTTTAAACAGA TTCATAAGTCACACCCTCCCTCTAGTAGGTCAGATTAGACATTAAAATTTAGCATATGACACATGTCACATGCCAAACTT GAGCTGCAAATTTAGAAGGCAAGTCAGGGTTGAACCGCACAAAGCCTCACTTGGGTTGCCCTATTTCCACTCTATGACAG TTTACGGAAAATAATATGGTGAAAGATGTCTACCTACTTAATCTAATTTTTTTATTAGCCTCAAGAGAATTAGTGTAATA ACTATATAGCATGTGGAATTGATAATACCAAAATAGTTATAAGTACCTAAATTATTTTTTATAAAAAAGTTTAGGTTTTT TTTTTAAAGTCTACTATTTTAAATTAAAATACCTCAGTCCCACACCGCTGCGACTTTCAAAATTGCTCGTTCTTCTCATG TGCCTCCCATCCCCGGTCCACACGTCTTTCTTCTCCTTTCCTTTTAAATTTCCACATCCTCTTCCTCTTATCCAACTATA TATACCCTTTTAGCTCTTACTTCCTCTCTTCAATTCAATTCCACAACACTTGAGCACGAAAACAAAAAATTTACACCACC ACTTCTACTAATCTGAATCCTCTTTTTTGACATAACAACTCCACTCTTCTCTCTGGCTTCTAAAACATGGTTGATTTTGA GTGCAAATCAAAGATGCTCAACTCCAAGTCCCTCAAGCTTGCTTTCCAAGAAAAGCCCATGCCCACTATTCCCCAGGCTT CTTCCTTGCCCAATTTGAGCCCACCTCTTAACTCAAATGACATCTCCCTAGCGTCGTCTAATGCGTGTGCGGCTTACGAC AACTATCTCCGCCTCCCTCAGCTCAGAAGCCTCTGGGCCTCCAACGACTTCCCAAGCTGGCCCAACGAGCCCATCATAAA GCCCGCATTGCAAGCCCTAGAGATCACATTCCGCTTACTTGCGACCGTGGTCTCAGACCCTCGTCCCTACTCGAACAAAC GCGAGTGGGGCCGTAGGATCGAGTCCCTCGCGACAACCCAAGTGCAGGTCATCGCCATGCTCCTTGAGGATGAGGAGCGT AGCCCTGAGACACGTGGCAAGGCCCCGGTAACCGACATCAACGACATGATCAATCGAAGCTACAGCGAGGGAAGCTTGCT CCCACGGCTCGCCACGTGGCAAAAATCCAAGGACACAGCAAAGAGGATCCTTTCCACCGTGGAATGTGAAATGACGAGAT GCACCTACACGCTGGGTTTAGGGGAAGCAAATTTTAACGGGAAGAAGATTCTCCGTTACGACGCCGTTTGCAGGCCGAGC GAATTGCACTCACTCGAAACGACGCCGTACGATCACGTTGGAAACTACGAGAATCGCACGCTACACGCGACGCACCAGAT CGTGGAGTGTTGGGCACGCGCCTCGCGCGGGCTGCTGGAGCGCGTGAGATCAATCGAGAGCGGGAAGTTCGACGAGGCGG CGAGTGATTGCCACGCGCTGGAGAAGATCTGGAAGGTTGTAACGGAGGTTGAGGACGCGCTGGTGATGATGGATCCGGTG GATTTCCTGAGGCTGAAGAGGTTGTTGGGGATAAAATCGTGTGGCGAAACGGCGCCGTTTTGCTTCCGATCGGAGGGGGT GGTGGAGATGGCGAAGGGGTGTAGAGATTTAAGGGAGAAGGTGCCGGAGATTTTGGGGGTGGAGGTTGATCCGAAGGGTG GGCCAGGGATGATGGAGGCGGCGATGAAGGTGTACGGGGAGAAGAGGGCGGAGAGGGTTCACGTGTTGCAGGCGATGCAG GCGGTGGAGTCGGCGATGAAGAGATTCTTCTTCGCGTATAAGCAGGTTGTGGCGGTTTTGATGGGGAGCGCGGAGGCAAA TGGCAACGGAAACGGTTGTTGTGAGTCGTTAAGTCAGATATTCATGGAACCAACTTATTTTCCTAGTTTGGATGCTGCTA AAACGTTTCTGGGGTATTATTGGGAAAATAATGAGGTTGTGATTCCTTGGTAAATTTACTTTTTACTGCTACACATACAC AAAAGGTTAAAAAGAAAGAAGAAAAAAGTCAAAAACTATTCATTCCTTTTTTTTTTTATATGAATTACATTATGTAACAG GTTGATTTAATGAATATTTATCTGTAAAGTATTCAACTATTCTTTGAATCTCTTTCAGCCAC
CDS sequence (LotjaGi1g1v0079700.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGTTGATTTTGAGTGCAAATCAAAGATGCTCAACTCCAAGTCCCTCAAGCTTGCTTTCCAAGAAAAGCCCATGCCCAC TATTCCCCAGGCTTCTTCCTTGCCCAATTTGAGCCCACCTCTTAACTCAAATGACATCTCCCTAGCGTCGTCTAATGCGT GTGCGGCTTACGACAACTATCTCCGCCTCCCTCAGCTCAGAAGCCTCTGGGCCTCCAACGACTTCCCAAGCTGGCCCAAC GAGCCCATCATAAAGCCCGCATTGCAAGCCCTAGAGATCACATTCCGCTTACTTGCGACCGTGGTCTCAGACCCTCGTCC CTACTCGAACAAACGCGAGTGGGGCCGTAGGATCGAGTCCCTCGCGACAACCCAAGTGCAGGTCATCGCCATGCTCCTTG AGGATGAGGAGCGTAGCCCTGAGACACGTGGCAAGGCCCCGGTAACCGACATCAACGACATGATCAATCGAAGCTACAGC GAGGGAAGCTTGCTCCCACGGCTCGCCACGTGGCAAAAATCCAAGGACACAGCAAAGAGGATCCTTTCCACCGTGGAATG TGAAATGACGAGATGCACCTACACGCTGGGTTTAGGGGAAGCAAATTTTAACGGGAAGAAGATTCTCCGTTACGACGCCG TTTGCAGGCCGAGCGAATTGCACTCACTCGAAACGACGCCGTACGATCACGTTGGAAACTACGAGAATCGCACGCTACAC GCGACGCACCAGATCGTGGAGTGTTGGGCACGCGCCTCGCGCGGGCTGCTGGAGCGCGTGAGATCAATCGAGAGCGGGAA GTTCGACGAGGCGGCGAGTGATTGCCACGCGCTGGAGAAGATCTGGAAGGTTGTAACGGAGGTTGAGGACGCGCTGGTGA TGATGGATCCGGTGGATTTCCTGAGGCTGAAGAGGTTGTTGGGGATAAAATCGTGTGGCGAAACGGCGCCGTTTTGCTTC CGATCGGAGGGGGTGGTGGAGATGGCGAAGGGGTGTAGAGATTTAAGGGAGAAGGTGCCGGAGATTTTGGGGGTGGAGGT TGATCCGAAGGGTGGGCCAGGGATGATGGAGGCGGCGATGAAGGTGTACGGGGAGAAGAGGGCGGAGAGGGTTCACGTGT TGCAGGCGATGCAGGCGGTGGAGTCGGCGATGAAGAGATTCTTCTTCGCGTATAAGCAGGTTGTGGCGGTTTTGATGGGG AGCGCGGAGGCAAATGGCAACGGAAACGGTTGTTGTGAGTCGTTAAGTCAGATATTCATGGAACCAACTTATTTTCCTAG TTTGGATGCTGCTAAAACGTTTCTGGGGTATTATTGGGAAAATAATGAGGTTGTGATTCCTTGGTAA
Protein sequence (LotjaGi1g1v0079700.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MVDFECKSKMLNSKSLKLAFQEKPMPTIPQASSLPNLSPPLNSNDISLASSNACAAYDNYLRLPQLRSLWASNDFPSWPN EPIIKPALQALEITFRLLATVVSDPRPYSNKREWGRRIESLATTQVQVIAMLLEDEERSPETRGKAPVTDINDMINRSYS EGSLLPRLATWQKSKDTAKRILSTVECEMTRCTYTLGLGEANFNGKKILRYDAVCRPSELHSLETTPYDHVGNYENRTLH ATHQIVECWARASRGLLERVRSIESGKFDEAASDCHALEKIWKVVTEVEDALVMMDPVDFLRLKRLLGIKSCGETAPFCF RSEGVVEMAKGCRDLREKVPEILGVEVDPKGGPGMMEAAMKVYGEKRAERVHVLQAMQAVESAMKRFFFAYKQVVAVLMG SAEANGNGNGCCESLSQIFMEPTYFPSLDAAKTFLGYYWENNEVVIPW
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 443 | 443 | 2.8E-216 | – | |
| Pfam | 1 | 186 | 186 | 4.0E-68 | ||
| PANTHER | 1 | 443 | 443 | 2.8E-216 | ||
| Pfam | 189 | 441 | 253 | 3.1E-120 | ||
| SUPERFAMILY | 211 | 435 | 225 | 5.1E-20 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Defense response | Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack. | ||
| Biological process | Tryptophan catabolic process to kynurenine | The chemical reactions and pathways resulting in the breakdown of tryptophan into other compounds, including kynurenine. | ||
| Molecular function | Heme binding | Interacting selectively and non-covalently with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring. | ||
| Molecular function | Metal ion binding | Interacting selectively and non-covalently with any metal ion. |
Expression pattern of LotjaGi1g1v0079700.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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