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LotjaGi1g1v0085800.1

Overview

Field Value
Gene ID LotjaGi1g1v0085800
Transcript ID LotjaGi1g1v0085800.1
Related isoforms 1
Lotus japonicus genome version Gifu v1.2
Description Mitochondrial carrier protein, expressed; TAIR: AT3G55640.1 Mitochondrial substrate carrier family protein; Swiss-Prot: sp|Q54MZ4|MCFB_DICDI Mitochondrial substrate carrier family protein B; TrEMBL-Plants: tr|I1M813|I1M813_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0085800
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr1:12430082..12439262) extracted from Lotus japonicus Gifu genome v1.2.

CACAAAAGCACCTCATATTCCTCAGCAAAAACCACACCCTACACCCGCACCCACCCTACTCCCCTCCTCCAAAACCCACA TCACCGTCCATCATAAAATCACCAATAAGGAACACAAAAAATCACCTGGAACGCGCCACACTGTATAAACTCCCCGCGGC TTTAACGTTCCTCGTGAAACAACCCCGCAAAACGACGTCGTCGACCGTCACCTCTATCTCTCTCTCTCTCTGCGAAAAAC AACGCTTCCTTCTTCTTCTTCCTCGTTTGAAATTCTGCAGAGTGAAAAATGCTGTAGATTCGTAGTTGCAGTTTCTTCTT CTTCTTCTTCTTCTTGTTCTCACAGTGAACGCTGTTGTTGGTAGAGTTTTCAGTGAACGGAGATGCAAACGGAGGCTGCT AGGGTTAGTGTCGCCTCCGTGGACGGCGGTGGTGTTCGGAAGTTGGTACAGAAACCGCCGCCGCAGCAGATTGGGACTAT CTCGCAGCTTCTCGCCGGTGGGGTTGCCGGCGCGTTAAGCAAAACGTGTACTGCACCGCTTGCTAGACTCACCATCCTAT TTCAGGTTAATTTAATTAAAAAAGGATTCTTTTCATGATTTTTTCATCTGGGTTTTTCTTAATTTTTTGAGTTTTGCTAA TTCTAGAATTTTTTGTTTTTTTTTTGTGTTTTGCAGATTCAGGGTATGCATTCGAATGTTGCAACGTTGAGGAAAGCTAG TATATGGAATGAGGCTTCACGAATTGTGAATGAAGAAGGGGTTAGAGCTTTCTGGAAGGGGAATCTGGTTACAATTGCTC ATAGGCTACCTTATTCTTCTGTTAATTTTTATTCATATGAGCACTATAAGAAGGTGAGGTTGCTGTTTACTTTAAAGGAG TATGTATCTCTATCTAGCTGAGAAATTTGCATTTATGGTTTGCATTAATTGGTATTTTTTTTATATATGTGCAGTGGTTA AGGATGGTTTCTGGAGTGCAAAATCATAGGGATAATGTCAGTGCAGATGTTTTCATACATTTTGTTGGTGGTGGCATGGC TGGAATAACTGCTGCTACTTCTACTTATCCCTTGGATCTTGTTAGAACGCGGCTTGCTGCGCAGGTAAGATATAGTCTGT TCTACCTTTGCTTGATGTTGTCATCCAATATTTTATGCCTGAGTTGCCATCCAGTCCAGGTCAATTTGATATTAATAGTT GCATAATTGATCTTCTGTGTGGTCTTAGTATCTTAGATATGAGCTTGAAATTGTCTTATTTTGAAATCTGCTTAAATTTG ATGAATTTTTTTATGCAGCAGGTAGTTAAATTTTTTTGCATTCATATTATTTATACTTGACAATTAGTATGTTGATATTT TGCAGACAAATTTTACCTACTATAGAGGTATCTGGCATGCTTTACAAACAATTATCAAGGAAGAGGGAATACTTGGCCTC TATAAGGGACTTGGAACTACACTCTTGGTATGCTGCGGTGATCAATTTAACATTACTTGAAATTTATATTTCTTTCTTGT GTAATTAGCCTCATCTCTGGTGCTAATGCAGACTGTAGGGCCAAACATTGCAATCAGCTTCTCCGTATATGAAAGCTTGA GAAAACTTTGGCGGTCAAATAGGTAATCAATGCACAAATTAATTGAACAGTCCTTTAATTTTTCTATTCCGTATATGTTT GATTATACTCATAGCTATTGTATTATTATTCATTATGTCTGCATCAGATCTGATGATTCAGCTGTAGTTGTTAGTCTGGC ATGTGGCAGTCTTTCGGGCATTGCTTCATCTACAGGTTTGTGATAAAAATGCAAAATTATGACTTGCTCTTTTGGCTTTC CTTCTCAGAGATATTCTTGATAAGTTGAACTTTTGATGTTACTTGTCAGATAAGTATTCTTGATAGCTTGCTTTTTTTAT GTTTCTTGCAATTGGGGTTATGCACATTCTTCTGGTATTTTACCTTTTTCCTACATCTTTGTTTTGCATCAGAACACTCA ATTTAGCGTTTTTGACTTGTTATATCAAATATTCATTAGATGTTCAATCACAGTTAAGAAACCTTTAGTCAAACTATTGA ATTTGCTCAAACCAAGAATATCAAAGAAGTTAATGTCTGTAGTGGTTTACTATGCTTTTGATGCAGAGAAAGAGAGTTTT CCTGCACCAAGCATCTAACCAGACTGACCCCTAGAACCAGAGACCAGGATGGAGTTGTTAATTTTCCTGGCATGTGAAAA TTTAGTAAGGAAGACAATTAAAAGACCCTTTTTCCTTATCTCTGTGACTTTATTATTGTCTAAAGATCTTGCTCAATTAA TCATCTTCCCAAGTTTCATTCTATGACATGTCTCCCCAAGCTATGCAGTGGATTCCGTCATGGGGTGGCATTACTTGGAT GAACCTATATCACTCCCTCAGTTAGCAAATGTGAGAGTTGTCCTCTTTGAGGTATGCTTCTCACTTAGGCTAACTTCACC TGATATTTGGACGGGTACCAGCATTCTTCAGGCCTTGCTGATGTGTTTCTCAGGAATCTGTTCTTACTGCTTTAATAATA TTGCTTTCAGCACAATCCTAAATGACATATTGTGGTAACAAATTGTAATATAGTTCCTCATGAGAAAAATCAATGAATAA ATGCAATTTACAACACAGAAAAGAACTTAGTTGTAAAGAAGAAACTAAATCTTATCAGTTGGGGGATGGATATTTTTATC AAAACAGTATTTACATAGACGCTATTGGATTTAAAAATCATTAATGTACTAAATGAAAGTTAAGCCTAACATTTTAAGCT TATGGAATAGTTGGTTCATCACATGGCATCGGAGAAGATGAACCAGTTCAATCCTTGTTGTCTTTATTCTTCTAAATGGA AGTTAAACCTTAGCACAAGGTTGGGTGGGGTTATGCATGTTCCATGTTTCAAGCCCAAAAGACTCTTTCAGAAGAAATCT GTTAAATATAAATATCATTCTTATGACAAAATAGGTTTTGGGGATAGTTAATTCCAAGAGACACTAACCACATGCATACA CAACTCTACTATTGCCAATTCATCAATAGTGTCATAAAGGTTTTCTGTCACTGCTACTGTGCTACATAGATTGCATGTTC AGGTAAGGTTGTGTTTCAGAGTCCTTCTCCTTAATCTCACTTTCACATGCATTTCTCTTTTTTGTTCTGAATATGTTAAA TGCTGCCATGATAAGATAGCACACATCTTTGAATTTCTTGTTGTCAATTGACCACAAATACAAGAGAACCCCATGGTTTC AATAATGTGCTATGTAGTCATCATTAAGCATAGCTGTTGCAGTGTAGGCTTGCACCTTTGTCGAAGGCACAAGATCACTA CAATTTGAAACTCTGTCTTGTCTATACAGCTTATCGATTTCAAATATTGTTGATTTTGATTGCATTTCTGGTTTTGGAAT TGGTTTCCAATTCAGCCCATTTGTTACTTTACCAGATTTGATAATGCATGACACAAAATATTAATAATCTGATGTATAAT ACAATCCCAATCCCAAGTGAATGTCTTCTGACTAGAATGATTATGGTTCAATTCATCTGTTTTCCTATATGCAGCAACAT TTCCCTTGGATCTTGTGAGGCGGCGGAAGCAGCTTGAAGGGGCTGGTGGGCGAGCCCGAGTGTATAATACAGGCATATTT GGTGTGTTTAGTCACATAATCAAGACAGAAGGCATGCGTGGCCTCTACAGAGGAATTTTGCCTGAATATTACAAGGTGGT GCCAGGTGTAGGTATTTGTTTTATGACTTACGAGACTCTGAAGACGCTTTTAGCGAGTATTACGACTGTGTGATTACACA CCCATCAACTTTGGAGTCTGGTCTGCATGAAGTAAATGGATGAACTTATTCACCCATGCAACATGGTTGGAGTTAGATTT ATCGATTGAAGTTCATTTTATTTTATAGGTTCTCACTTCTCATGGGGGTAATTTAGTAATGCTGCTGTGGGGATCACATT TTTACTTGTACAGAGATTTTCACATCATTTAATATTAGCCTGTTGTGGCTCTTGTATTCTCATGTGGTCTGTTAATCTTT TGCACTCTTTCTCAAAGAGATAAGGGATGTCAAAATGAACTATAAATCTGCAACTCAATGCCTTAAGGAGACAGCTTTTC ACAAGTGCATTTTCCCCACGGCACGTGTGGTGAAGTTGAAGTTGAAGACATCATGTTGAAGTGTTGTGCAGCATTGTAAT CTTTGAGAAATGACCTATTCTTCATATATGTAGTTAGAAGTAGTTACATGAACACCTTGGATCCCTTTATTTTTGTCTGT TAAGAATATTTGACTGGGGTCCATTTCTTTTCATATTGCCCATATTAAATGATTAATTTATTATCAATGACTCTGTACTT GTTATAGGACCATCCTGACTATTATTTGAGAATACAATAGTCATTTTCTAGTGAATATTTTGATATGAGAAGTCACTTTA TATTTGAATCATTGATGAAAGAAATTCATTTGCTATGAATAAGTTGAGACACGGAGCAAATAGAGAGTTGTGTTATATGA TATTTGTTACTTTTCTCAGTTTATGTTGAGTTGAAGACATATAAATGTAAAAAATGACATGAAATGATAAGTCACATTTT ATTTGAATTGTTGATGAGAGAAACTCATTTGCTATGAATAAGAATATTATGAAAGCAATGTTGCTCTATATTGTCAACTT CATTGATGAAATGGTACATAAAAAAGGAAGACCATGAACTTCAATCCACACTTAGAGCACGTGTGTTCTTATTACAAAGG GAAAAAACCGGTCAAACGAATATGATCAAGAGTACAACGTAAACCATATTTGTTGACAGCTTCATTTGCAGCTCTGAAGC CACCACCATAAGCTGGGGAAGAATCATTGGCAATCTGATTCTTGAAAAATTCACCCAGTTTATTTTCAACCTGAGACACC GCACCTTTCTTTGATGAGGACGAGGTGGAGGAGGAAGAAGCACCTGTGGATGTTGATGGCATGCTTCGAAAATTTGGCAT TACTTCTGACTCAAGCCACATATATGAAAGAACCTGACAGATCCCTTCCTCTACTTCAGGATTAAGGTTGCGGTAACCTG TTTAGTTCAAACATGAATTAGAGGAAAAGCCATGTATACCAAGAAGTTGAATACTAGGATAAAGCATCAAAATATGAATG TATATCACTCGGGACTCAGAATTCTCTCTTGTATATATAAGAGATAGATAGACACAAAATTTTAACATGACACTGAAATT TCAACGTGAGAAGATTTTGATTGGAATGTATATACCTTTAAGGCGTAACCAGGCATGCATTAACTCGTGGGCAAGTATAG CGCCAGTGAGTAACCTGCATCTCATGAAAAAATGAGAGCTTATGAAGTTTGGACATCATCAATAGGAAGAAAGTGGCATA GTCTGCTATGAGAACAAAGTTTCCATGGTCCATAACTTACCTGGGAAGACCATATAGAACAAGAATTGCTGTAACTTCAC ATTTTCTAATCAGCTTTTGAGGTTGAGTTCTCATCCCTATTAGTCGGTGGCCTCCAATTCTTGGCCTTCTATGTATCTGA AACAACATGAAATCAGGAAGTAGTATGTAATTTTCTGACAAACAATCTGCAACATGCTTCATGATCCAAGCAAACAAAAA TTAAATAGTTCTAATATCATACACTGGTGACAGTTTGCTCTTCTGAAAGACATAAGCCCCTTGTTTCTGGCAAGTGATGG AAACCCTGGAAAAAACCATAAAGAGTAAGGGGAACTGGATTAAGTGCATGTTTGGAAATCTCTACAATTGATTCTAAAGT CAGAATCAATTCTGTAGAGAAGCTTCTATGAGTAGCTTCTGGGTGACAGAATTGATCCAAACATGCTATTAAATTACTTG AATAAAACCAAGGAATGAAATTTTCATTACATTCTTCTCTCCAACAATAGCATCATTAAGTGCTTCTCTCTCAACGAGAA GCATGGGAACTTGTTGATCTATTCTCATATTCATTCCTTCATAATAATCTCTGATAGAATGGTAGAGAGGCTGACAATCA CCAGTGTCCATTATAGCAGATTCCATGCACTCTAAGCACAAACTCCTTCCATCTTCCAGCCTATAGTATTTTATGTTCCG AGGCTTCAAGGTAATAAAAAACAACAGATAAAAGCTATTCTTTATCTTTTTTTCGTGAAGTACAAATTATTGAGCAGTGT GGAGTATCAGTTAAATCAGTACCTCCAATCTTTCGCAGCTGCAGCAGCGAGATGTGTTATCATATTCATGAGATGGACAA TACTTTTGGGACCAAAATGGGTGGCACCTATACTCAATCAAACCAGCAGCATTTATAGGAATCTGAAAGTAAATAAATAT TTAACAAGTGTTAATGTAGCTCTGCATTAAGTATGAGGATGACAGGAAATTGGTACACAAGACATGATCTTAATGCAGAA TAATTTAAATAAGCAAAGGCAGACTAGTCTTACAAATTGGAAGCAAACTTCGCATTTTGGGTGGGTCAGCTCTTGAAAAC AGGACTTGTGATATGGATGCTTCCCTGACAGTGAAAACTTGGATCGACAGAGAAAAAAATTGTCAAAATCAATACTTTTG TAACACCAAGAATATCTTCAAAAGTCTGAATAACATGAATTTGTAGGAATCAATTCAGAGGAGAATCTTATGTGAGTAGC TTCTGTTCAGAATTGATTATGGAAGAAAGAAAAGCTGGTCCAAACATGCAATAAATATCCAAGAGGGTCAAACTACCTCA CGCTCGGTAATGGGGTAACGACAAGCGTGACAGCGGAAGCAGTCTGGATGAAAGTAAGTATCCATGCAGCCCAAACAATT CCCATAGATTATCTCCTGGTTGCAACCTCCACATATTCTTCTGTTCAATGGCAAAATACACATTATTAGTTGTAAATGGT ATCAAACTCTGCTATTCCTATTACTTAGGTGTTTAGATAAGAAGAAAAAAACTAGATCGCAGCTGCATGAATTTAAATGC TTCAAGATCTTTTCCACTTCTTAAATTTGTTTTACAAAGATCTAGAAAGAACAAATTCTGATTCCTATAGCAGTTTGATT CATTGAAACCAAAAAAAAAAAAGATTCAGCAGGACCATCATAATGTAGAGACTAGAGAGACATTAATAGCATGTTTGGAA ATCCTTTAACAATTGACTCAAAAGCCAGAATAAATTCTGGGGAGAAGCCCAGGTCAGTAGCTTCTGGGTGACAGAATTGA TTGTGAGAAAAAATAAGTTGATCCAAACATGTTATAATACACACATTATGTCAGAAGATCTAAAACAAGCCTTGCCAGTG ACCAAATTGGAAACACTTGATGTTTGGCACCTGCATATTAGTACAAAATTTTGAAGAGCAAAGATTTTACCTATATTCAT TGGGATAGTATGGTGCTGGAGCATATGGAGGTTGTGCATATGAGTTCAAGGGATCTTTTGTATAACCTTCATCGATGTCT GCCCCCCAATTATATCCTTGATGGGCTAATGGAAATAAATGTTTAATCTTTGATCAGAAAATATCAGGATAGCTAGAGAG AAAGCACCTTTTTGAAAATTAAGCACTTACCATTTGGTCTCTTCAAATCTTCTGCTGAAGAAAGTGCCATTGCATGGCCT AGATCCTCGTTCTCCTTCGGAGCTCTAGCACGATCATCCTAATTACTTCAAGAGTATTATTCCACATATAATATCCTCAA TCATAAAGGCTTCATGAAGCATACTTTCTTGTCCAAGATTTATACTATTGATTTCCCACCTCTCAAGTTATTTTATTTTT AAATTGAAATCATGAAATGGAGGAATTTGTTCTGTTCCCCCTCATTGTGATAGCCAGTAAACTGAGATTGAAGGAACTAA GTAAGAATTAATGAATTGGCAGATAGAGAAGAAGCCGTTTAGATGTTCTAAGAAGCCACAGAGCATCATTGGAATGCAAA ATGTAAAGTTACCAGTGTGAATCCAAATCTATGGAAAGGAAGAAATAATATGTATAATTCAGAAAGTGCTTTGGGATGCT TTGTCTAAATACAAAGTCTTGCTTCAGGTTGATGAGATCAGAGGTTATCTAATCAACCAAATAAGACAATAATATACTGC ATTATCCAAGTGTGTGTTTAGATCAACGTTGGCACAATTGATTTTGGTTTGGATAAAATTTATCTTGGTAAATTTGATTA TAGTAAAAGTGAATATAAATGAGTTGAAAATGAAGTGGTGTGTGTTTGGATACATTTATGAAAAAAAATGATTTTTATAG AATAATATTGTGAAACTCAGTTGTAAAATCTCACAATTGATTATGTTCAAAGCAAAAGCTACTCTCTCTAGCTTCTAGCA GAATTGATTTTGGGGCTGAAATCGATTATCCTAATTGACTCCCAAGCATCATATTGTCGTTCGAAATTGATTTTAAAAAT CAAAATTGATGATGAGGTTCCACAATGATGAACCATACACACTAACTATTTGCATTTCTCACTTTAATCATAAACAAGGT CAAGAACAATAGATATCATATCATTGAAGAAAACTGAAAGCCAGTGCTGCTATTTACCAAGGCTCTAGATGGAGCACGCC AAACTATGTTTTCCTCGGCAGGCTCATGCAGACGACGACCACCCCTTGCTCTATTGGACCCACCTTTGAAAAGCTTACTA AGCCATTTCATGAAACCAGACTTTCTCTCTGAGTGAGAAAAATCCCCTGCTTGCCACAAAAAAGTTCATGATTCAATCAG TTATGTCAGAAGTTTAGAACCACTTAATCATAGTAATATGAACAAAGTTCAAGGATCAAGCCAAACCAGAAATAACATGG TCTAGGTAGATAATTTTTTGGAAACATATGGAAAGTAAATTTTGAAACTTTGAGAATACCCAGTAAGTAAAATCAGCAGA AAAAACATGGAAGTTTAATAAGAGCTTCATGGGGTCATTCTTAATTTTACAAAATCGATTTTTTTTCTCCAATGGAACTG CTTTTAATAGTAAATTTTGAAACTTTGAGAATACCCAGTAAGTAAGATCAACAGAAAAAAATTTGGAAGCCAGCTCAAAT AATCATGGGGTCATTCATAATTTTGTAAAATCAAAATTTTCTTCCTAGGGAACTAACTGCT 

CDS sequence (LotjaGi1g1v0085800.1) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGCAAACGGAGGCTGCTAGGGTTAGTGTCGCCTCCGTGGACGGCGGTGGTGTTCGGAAGTTGGTACAGAAACCGCCGCC GCAGCAGATTGGGACTATCTCGCAGCTTCTCGCCGGTGGGGTTGCCGGCGCGTTAAGCAAAACGTGTACTGCACCGCTTG CTAGACTCACCATCCTATTTCAGATTCAGGGTATGCATTCGAATGTTGCAACGTTGAGGAAAGCTAGTATATGGAATGAG GCTTCACGAATTGTGAATGAAGAAGGGGTTAGAGCTTTCTGGAAGGGGAATCTGGTTACAATTGCTCATAGGCTACCTTA TTCTTCTGTTAATTTTTATTCATATGAGCACTATAAGAAGTGGTTAAGGATGGTTTCTGGAGTGCAAAATCATAGGGATA ATGTCAGTGCAGATGTTTTCATACATTTTGTTGGTGGTGGCATGGCTGGAATAACTGCTGCTACTTCTACTTATCCCTTG GATCTTGTTAGAACGCGGCTTGCTGCGCAGACAAATTTTACCTACTATAGAGGTATCTGGCATGCTTTACAAACAATTAT CAAGGAAGAGGGAATACTTGGCCTCTATAAGGGACTTGGAACTACACTCTTGACTGTAGGGCCAAACATTGCAATCAGCT TCTCCGTATATGAAAGCTTGAGAAAACTTTGGCGGTCAAATAGATCTGATGATTCAGCTGTAGTTGTTAGTCTGGCATGT GGCAGTCTTTCGGGCATTGCTTCATCTACAGCAACATTTCCCTTGGATCTTGTGAGGCGGCGGAAGCAGCTTGAAGGGGC TGGTGGGCGAGCCCGAGTGTATAATACAGGCATATTTGGTGTGTTTAGTCACATAATCAAGACAGAAGGCATGCGTGGCC TCTACAGAGGAATTTTGCCTGAATATTACAAGGTGGTGCCAGGTGTAGGTATTTGTTTTATGACTTACGAGACTCTGAAG ACGCTTTTAGCGAGTATTACGACTGTGTGA 

Protein sequence (LotjaGi1g1v0085800.1) extracted from Lotus japonicus Gifu v1.2 Proteins.

MQTEAARVSVASVDGGGVRKLVQKPPPQQIGTISQLLAGGVAGALSKTCTAPLARLTILFQIQGMHSNVATLRKASIWNE ASRIVNEEGVRAFWKGNLVTIAHRLPYSSVNFYSYEHYKKWLRMVSGVQNHRDNVSADVFIHFVGGGMAGITAATSTYPL DLVRTRLAAQTNFTYYRGIWHALQTIIKEEGILGLYKGLGTTLLTVGPNIAISFSVYESLRKLWRSNRSDDSAVVVSLAC GSLSGIASSTATFPLDLVRRRKQLEGAGGRARVYNTGIFGVFSHIIKTEGMRGLYRGILPEYYKVVPGVGICFMTYETLK TLLASITTV 

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER 26 324 299 2.2E-173
PANTHER 26 324 299 2.2E-173
Gene3D 27 328 302 1.7E-88
SUPERFAMILY 29 319 291 1.57E-77
Pfam 29 123 95 1.7E-19
ProSiteProfiles 30 121 92 19.359
PRINTS 35 48 14 1.1E-26
PRINTS 48 62 15 1.1E-26
PRINTS 96 116 21 1.1E-26
ProSiteProfiles 137 223 87 27.662
Pfam 139 226 88 4.9E-24
PRINTS 152 170 19 1.1E-26
PRINTS 196 214 19 1.1E-26
ProSiteProfiles 232 322 91 22.148
Pfam 233 324 92 1.5E-23
PRINTS 241 263 23 1.1E-26

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
Molecular function ATP transmembrane transporter activity Enables the transfer of ATP, adenosine triphosphate, from one side of a membrane to the other.
Biological process Transmembrane transport The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other.

Expression data

Expression pattern

Expression pattern of LotjaGi1g1v0085800.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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