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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0092500 |
| Transcript ID | LotjaGi1g1v0092500.3 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Senescence-associated protein, putative; TAIR: AT1G66330.1 senescence-associated family protein; Swiss-Prot: sp|A6X2S6|BIOD_OCHA4 ATP-dependent dethiobiotin synthetase BioD; TrEMBL-Plants: tr|K7KAK1|K7KAK1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0092500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:13580808..13586034) extracted from Lotus japonicus Gifu genome v1.2.
ATGGCACTTACTGCAAACAAGATTTCAAGCGGTCCTATCGTGACTAATAGAACAGCTATTTGTAGATCACATGAAAAAAA TTGTGTTTTCGTATCAACAAGGATCAACAGAATACAGCCTTCAAGGCATAGACTGGAGCATGGACATCTGAAGAATGGAT GTCTCCTCGAAGAGAGATCAACCTTATCCAACGACTGGTTTTGGTTCACTAATAGAAAACCAGTTAGTTTAACCTCCAAG AAATCTTCCATCTCATGTAAATCAACAGGAGCAAATAATACTGAAGAGAAAGAACTCATTGCAACTTATGATGATGTTTC TGATTTAACGAGGTAAGAAAAATAAAAGATAGATTAAATTTGTCCAATCTGTTACCATTTTTTTACTGTTTCCCAAGTCT GAGCCATTTACCTCACTTGTATTTCAGTTGCCAATTTTATTGTATGTCAAACTAGCATGTATCTTTCTTATTCTTTTGAT GATGATGACATGCAATTTTATAATAATTGAATATTTGAGGATTCTAACTTACATGGTGGAGCTTTCATATGTACAGATTG CATTCCAAAGATGAGAAAAATGACCGCACTCGTTCTATTCACGGCTTGGCTGAAGCTTGTAAATTCGTTTTCAATGATGC GAAGTTTCTCTCTCAGTACTGCCAGTAGCCTTGTTTTGCTCTTATGCTGACAATACTCTTTTCTGTTTAGAATGTAGTTC CACTATTGTTTATTTGCCCTCGTTGTCCCCCCCCCCCTCTCTAAGGAACATGTTAGAACTATATGAACTGTTAAAAAACC CTTTAATCGGAGAACCCTCTTCTAATAACTATCAAAGCAATTACTCGAAAACCATGTTCAACTGTTCTAGATATTCTAGT AATCTTGACATGAGTTATTATATTATGGAAAATGTCTCTAACTGACTTAAACATTGGTTCTCAACTCATTTTCTGTTCTT TTCATGTAATTGAATATTGTAAATTATTATAAAAAATCATTCGAGAAGGATGGGAAGAAATAAAAGTTTGTCCTGATTAA TGAAAATTACTATTAACTAATTTTTTTTTTCCTTCAGTGGCATAATGAGCCTGGATGCCCGTGCACGCCAAGATGTTGCT TTGTTAGGGACAGAATTTCTCAAACTTGATGGTTAGCTCATTTACTTTGTTTAAATAATGAGCTATTGTATTTTAACTTT GCATTACTTATTTCTTCCAATGAAATAATTATTTTCGTTAGCTAACTTTTCAAATATATACTACAACTACAAGTCACTGT GTTTCACACACAAACATGGACCATGATATCCTCACATTAGCCCATGGAAGAAATAAAGAAGTTAAATGATATAGTAACTG TTTAAAATTAGCATCTTCATTTTGATGAGATTATTTCTTTTATATCAAGGTAGTTTACTTTCCTTTGGAGCATATAGGGA ATGTTAAAATTATTACTCCCTCCGTCCCTAATTATAAGCTAAAGTTGAGACTTATGTTTTGTCACTAAATATAAGCTAAA GTTGTAAAAGCTAATATTTTTTTCCATATTTACCCTTGCATTTATTGGTAGTGGAGCACTATTCATAGTATAATAATTAA AAAGTTCTATCTTAAATAGGGGTAAACATGAAAAGTTGCACATTTTTTTCAAAAACCAAAGCATCAATTAAACCTTTCTT AATAAGCGTGATTTTTACAACTTTAGCTTATAATTAGGGACGGAGGGAGTATAAAACAATATCAGTCAATTATGGTGATA ACATATTGTAGTTATCCTTGGTCTTTACATGTGTTGAACTTCTCATCCTTCTACCTCCTTCTTCGGGTTCAAGAGCTTTT GCACCTTCATAGATGATTTTATTCGTATGTACCCTTGTATGGCAAACTTATATGTATATTTTTATTTTCTACATTGTTGC ATAGCTCGGGCAAGAGAGGATACAGAGAAAATTGACCGTGGTGTCAAGGAAAAAGCTGGGCGTCTTAATCGTATTGCTAC TGTATGTATCACCTAGAATCTTCAAAACTTCTGGTACATGTTGGAGGTATAATGCTGATTTATTTTATTTATTATAATAT TTGCTCTGCAGATCTTGAAGGATATAGCCAAATCCAGATTGAAGAGTGCTGCTGATGAGCACTGGAGTGATGGGGCCTTA GAGGTATCTGTTAATCTTTAATCTCAGTTTTAATCCTTAGGATGATAATCCTGTTTAGTTTGATATGAAGTTCGTACTGA TAAAATTTGCATCATGTGATACTTATATATCTTTTATATTTTGCTCATATCTCTGTCACTATTTATGTACTCTCCAAGTT ATTGGTTATCATTTATTGTTGATTGTTGGAGAGTGAAAAAAAAAAAAGATAAAATGTTACAAACTATTGTAAATTTTACC TCTTTTTTTTTCAATTAAATTGAAGTTAGGTGTTTTTATTTAACATATTACTAGGCTCATTGGTGGACAGAAATAAAAAT ATGTAAGATGTTATGCTATATAGTAAGACTAAGCATGGGTTTCCGTGGGCACATCTTGGAGTGGCATGATCTCCTAAACA TGTTATTTAGGACACCTATGACATACTTGTGTAATACAGTAGGTATTTGACTGACATATTATAGAAGAAAAACTTGAAAT TCAGTCTTCTGGAGCTATTATTCATTGAGTTAAAAGCTAATAAAATAAATTAAGTTGTTATTTTGGTACTATGTGTCTCC AACTTGAATCTATTCAGGTTCTGGAATTAGTCTCTTGTGAATACAAAGTAAAACTTCCTACAATAGACCTGTAATAAGTT TGACGCTTCCAGATCCTGCTAAGGTGGGAGTTTTAAAACATTGGTTCCTCTTTATGTAATGTACTTTTCATAAAAAGGGA AATACAAACCATTTGGTTTACTTGTTTTCATTTAATTTTTTATGCAATATCAGTGCATAATCACTGTTAATCTTTCCTGG ATTGATCAAAATCAATTTGTATGAGAAGATTTTGGATGGTGTGTATCTCAAGGTTTATATCATTGTGAAGTCACCCCAGT CGTATATAAAATGTGTATATATTATGTTATAATATATGATTAAGGGATTTGGTTTGGTTCATATGGTTCAGTTTATCCCA ACCATAGACCAAATCACCAAATAATGCATTTTGTTTTAAACTAAACCAAATCAAACAGCTAAGTAAATGAACACAGTTTG GTTTAGTTTGCCCAATTTAGTTTTTATTCTTTAACACCTCCATTCAGTTCATGTCTGTTCATTGGATTAGACCTTTTTCC CATCAGATCTATAGTGTGTTCGAATTCTTGTTCACAATATGAGCAAAAATTACAAGAAACAAGCTTTTACCAAAAACAGA GTTTAAACCTTTCTAAATAAAAGTCCAAACATGCTTTTAATTTATGAATTGTTTTGTTCTTATAGATGTTTCCTGTTTAT TCCTATCCCATATGTATATATATATGAATTGCCAAAAAATACAAGGCTCCTTTTGACATAACTTTTGAACTGTCAGGCTG ATTTGCGTCTTGCTGACTTCCGTGCTAAGCAACGTGCAATGGAAGATGCCCTTATGGCCTTGGAGGTGATATTTTATGTT CTGCAAGTGTTTATTGTGGAACTTCATTTAGCATTTTATGATGTCAGGCATCGGGTGTTATATTCTTTATTATGAATCTG CCACTGTACATAACCTGTTTTAAAATATCATGCACATTTTTGTTTTGTTTTAAGCTCCAAGGTCTAAATTATTTCTACTG TATAAATATTGCAGCTCATCATAAACATCCATGACAGGATGGTCAGCAAGATGTATAACTTGTAAGTCAAGTAACTTAGA AATCCGTGCTTATATAAATATATAATAATAATAATTATAAACTCTACAATGTTGCATATGATGTTTCCGTGCAGTCCTCT TCGCATAGTTAAAGGTTCTCTTTCAGAAAATAATGTAAGAGGTCAAATCATGCTTGAAAAGAATGGAAAAGCCACAGATT CCTTTCCTGGGGATGTGACCACAGAACGGATTACTGCTCTTCAGGTCTTCCCTCATTTCCATTTTCATTTTGCGCTGTTT ATGTGTAAAACAATCCTTCTTAAGCAATTGAATTACGGAACGATCGTATCCTAGTTCTAATGTATTAAGGTCTACAGGAA GCTTACTGGAGTATGGCATCAGCACTTTCTGAAGCAGATGGAATTGATTACACTGATCCTGAAGAGGTTTGATTCTCCGT TGAGTTCTGTTTCTTTCTAATCCAAGTTATTCAAATATTGATATTCTACACGCTCTTCTACTGGGATCAGCTTGAGTTGT TGATTACAACTCTTATAGACCTTGATGCAATGGATGGTAAACAAAGTGTATCTCTGTTAGCAGAATGTTCGAGTTCCCCT GATGTCAGTACTAGGTAAGCTTCCTGTGATATTACAATCTTTCAGGAAATCAGATTGCATCCTCTATTATAGTTAAAAGG GATAAGCCATATTTTTCTTTCAACCAAATTTGTTGCTTTTAAAATTTCAAGCAGTAATATTATTCACATGAAGGATATTT TGTTACTGCTTCTATAATCTATACGCCATGATGATCAAGCATGATTGACATCATGATTTGAATTTGTATTCTTCATAAGT GACATATTCTCATCATTCCTTGACAAGGTTACAGCATTCTCAAATGCTGAAAATTAGAATTTCCTGATACTAAGTTATGC AATATTAGAATTTGGATTAGTTAATGATGCAATATTAAAAAAAAAAAGAGATTAGTCAATGATGCAAAGCTTCTACTGAT TACTTTACTTCTAAAGAAATATATGGTAATCATGAATGCAACCTTAATCCTTACCTAATTATGAGCCTTGTTTATTTTTG TATCAACTTCTAGACGCGCTTTAGCCAATGCACTGGCAGCAGCACCATCAATGTGGACTCTTGGAAATGCAGGGATGGGG GCATTACAGGTTTGTGTCTGCAGTTTATAATTTTGACAGTTTCGCTTTTCTCCTGTTTGGCCGAAGTTGATGCATTTGAT AAATGTTTTGCAGAGACTGGCAGAAGATAGCAACCCAGCTATTGCTGCTGCAGCATCCAAAGCTATTTATGAACTGAAAA AACAATGGGAAATAGAGGAAGGGGATAGCTGGAGGTTTATGATGGGCGCAAACACCGAGGAAGAAAAAGAACGCAGAGAA TATGATAATGAAGAAGATACCAAATAA
CDS sequence (LotjaGi1g1v0092500.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGATGATATTGCATTCCAAAGATGAGAAAAATGACCGCACTCGTTCTATTCACGGCTTGGCTGAAGCTTGTAAATTCGT TTTCAATGATGCGAAGTTTCTCTCTCATGGCATAATGAGCCTGGATGCCCGTGCACGCCAAGATGTTGCTTTGTTAGGGA CAGAATTTCTCAAACTTGATGCTCGGGCAAGAGAGGATACAGAGAAAATTGACCGTGGTGTCAAGGAAAAAGCTGGGCGT CTTAATCGTATTGCTACTATCTTGAAGGATATAGCCAAATCCAGATTGAAGAGTGCTGCTGATGAGCACTGGAGTGATGG GGCCTTAGAGGCTGATTTGCGTCTTGCTGACTTCCGTGCTAAGCAACGTGCAATGGAAGATGCCCTTATGGCCTTGGAGC TCATCATAAACATCCATGACAGGATGGTCAGCAAGATGTATAACTTTCCTCTTCGCATAGTTAAAGGTTCTCTTTCAGAA AATAATGTAAGAGGTCAAATCATGCTTGAAAAGAATGGAAAAGCCACAGATTCCTTTCCTGGGGATGTGACCACAGAACG GATTACTGCTCTTCAGGAAGCTTACTGGAGTATGGCATCAGCACTTTCTGAAGCAGATGGAATTGATTACACTGATCCTG AAGAGCTTGAGTTGTTGATTACAACTCTTATAGACCTTGATGCAATGGATGGTAAACAAAGTGTATCTCTGTTAGCAGAA TGTTCGAGTTCCCCTGATGTCAGTACTAGACGCGCTTTAGCCAATGCACTGGCAGCAGCACCATCAATGTGGACTCTTGG AAATGCAGGGATGGGGGCATTACAGAGACTGGCAGAAGATAGCAACCCAGCTATTGCTGCTGCAGCATCCAAAGCTATTT ATGAACTGAAAAAACAATGGGAAATAGAGGAAGGGGATAGCTGGAGGTTTATGATGGGCGCAAACACCGAGGAAGAAAAA GAACGCAGAGAATATGATAATGAAGAAGATACCAAATAA
Protein sequence (LotjaGi1g1v0092500.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MMILHSKDEKNDRTRSIHGLAEACKFVFNDAKFLSHGIMSLDARARQDVALLGTEFLKLDARAREDTEKIDRGVKEKAGR LNRIATILKDIAKSRLKSAADEHWSDGALEADLRLADFRAKQRAMEDALMALELIINIHDRMVSKMYNFPLRIVKGSLSE NNVRGQIMLEKNGKATDSFPGDVTTERITALQEAYWSMASALSEADGIDYTDPEELELLITTLIDLDAMDGKQSVSLLAE CSSSPDVSTRRALANALAAAPSMWTLGNAGMGALQRLAEDSNPAIAAAASKAIYELKKQWEIEEGDSWRFMMGANTEEEK ERREYDNEEDTK
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 10 | 322 | 313 | 2.6E-174 | – | |
| SUPERFAMILY | 218 | 297 | 80 | 1.9E-5 | ||
| MobiDBLite | 313 | 332 | 20 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi1g1v0092500.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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