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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0100800 |
| Transcript ID | LotjaGi1g1v0100800.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Oxidative stress 3, putative isoform 2; TAIR: AT5G56550.1 oxidative stress 3; Swiss-Prot: sp|C7EXK4|AT8A2_BOVIN Phospholipid-transporting ATPase IB; TrEMBL-Plants: tr|I1MBQ1|I1MBQ1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0100800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:15302730..15304462) extracted from Lotus japonicus Gifu genome v1.2.
GGGATACAATACAAATACTTCACCCTTATCCAAAGTTCTTGTCAACTTCACAAATCACATTCCACGTACTCACCTACCCT TGATTGATTTTCTCATCCCTGTTAATTAAAAATTGACAATAATTTTTTTTCTTTATATACAATCTTAGTATAATGTTTTC AATTCGATGATGTTATGTTTCCAATACGAATGTATGCAGTTGGAATGTCAAAAAAAAAAAATTGTATGCAGTTGGATTTT TAGTTCTTCAAAGAATAAGTGGGATAAGAGAGAGGAAGTTCCGGATTAGGGGGACAAGAAATATCAAATTCGGATAAAAC CGAATCTTACTATTTCTGTCTTATAGAATATCATGATATAATTTAAAAAAAAATGTATTCTTATCCAATCATCTTAAAGC CTTGCTTATAAATCATCCAAGCTAGTCTTTCTATTCATTGACACAATCACTTGTGATTCCATTTAAAGCATAGCTTTAGA AAGAGGGAAAAGTAGGTGTGTCATAGAGTGCTATAGCCAGGTATAAATTGTTGCTTGAATGGTTTGGAAGAAAGTGAAAA TTTTACGAAGTATAAAAACTAAAAAGGGTAAAAAAAAGGTTTATTAGAGATGGAGCAGCTGAAGTATGCTACTGTTGAAG CTAATAAGAAAGGAGTTGAAGCAATTGATGATGAGTGTGATCTTTTTGGTTTTAGTTCTTCTTCTGAGTCTGGAATTTCA AGTGGGACGTTTTTGGAATCTGATTCATTTGAAGAAGTTACATCCCCTCCTTGTTCTTCATCATCAGGTGATGATCATGT TGGAGATGACCCTTTGAGTGACATGTCTTCTTTGATTCAACAACTTCCCATTAAGTAAGCTTCATTCTTATCTCATCTCA CTTAATATTTGGAAATTTTTCAATATTTAATTTTAAAATCAAAATTAATTCTGAAGAAAAGCTATTCTAAGAAATTTTTG GTGCCAGAATTAATTTTAATGAGTAATATTTGTTGGGTTTTTGGCCTTTTCATAATTCTTAAACCAAAATCTTGATTGTA AGAAACAATCTTCTTAAATTTTGTAATTGTCCACATAATTTTGACTCTACTGTAATTTTTCATTGAGACATCGTTAATTC AGGAGAATAATCGATGTTAATAGCTTTGAGTATATCACAATTGATTGCTATGAGTAATGATAACTTTTTGTGGGTTTTTG TATTTTGCTTAAGTTTCTGTCCTTGGTAATGGTCAATAGGAGGGGACTTTCAAAGTATTACCAAGGGAAAGCACAATCTT TCACTTCATTGGCAAAAGTGAACAGCTTGGAGGATCTGGTTAAGCCAGAGAACCCATACAACAAGAAGTTGAAGTCTTGC AGAAGCTATGGAGGGAAAATGGATGAGACACAAAGGGCAAAGTGCACTCCTAGTGCTATTTCTAGGAGGAGATTGCATAC AACAGGTTCAAGCTATTCAGTGAGTACTGCAGAAAGGGGCAGTGGCAACTTTACTCGTAGCAGGCCTCAAATCCCACCTC ATAGATCTACCAGTTCCAACAATATTCCTAATCAAACTGCTCTGTTTGTTTGAAAGGGATCAAAAGTTGAGATGTTTATT CTTTTTTTTTTGTAAATTAATAGCTGAGAGGTATTTGGTGTTGGGAATTTGCAATCATAGTCTTAATAAATAAAAAATTA TTTGCAATTATATGATGTTGATTTAATTTGTGTTATTCTCGAGGAAAGTTCTC
CDS sequence (LotjaGi1g1v0100800.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAGCAGCTGAAGTATGCTACTGTTGAAGCTAATAAGAAAGGAGTTGAAGCAATTGATGATGAGTGTGATCTTTTTGG TTTTAGTTCTTCTTCTGAGTCTGGAATTTCAAGTGGGACGTTTTTGGAATCTGATTCATTTGAAGAAGTTACATCCCCTC CTTGTTCTTCATCATCAGGTGATGATCATGTTGGAGATGACCCTTTGAGTGACATGTCTTCTTTGATTCAACAACTTCCC ATTAAGAGGGGACTTTCAAAGTATTACCAAGGGAAAGCACAATCTTTCACTTCATTGGCAAAAGTGAACAGCTTGGAGGA TCTGGTTAAGCCAGAGAACCCATACAACAAGAAGTTGAAGTCTTGCAGAAGCTATGGAGGGAAAATGGATGAGACACAAA GGGCAAAGTGCACTCCTAGTGCTATTTCTAGGAGGAGATTGCATACAACAGGTTCAAGCTATTCAGTGAGTACTGCAGAA AGGGGCAGTGGCAACTTTACTCGTAGCAGGCCTCAAATCCCACCTCATAGATCTACCAGTTCCAACAATATTCCTAATCA AACTGCTCTGTTTGTTTGA
Protein sequence (LotjaGi1g1v0100800.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MEQLKYATVEANKKGVEAIDDECDLFGFSSSSESGISSGTFLESDSFEEVTSPPCSSSSGDDHVGDDPLSDMSSLIQQLP IKRGLSKYYQGKAQSFTSLAKVNSLEDLVKPENPYNKKLKSCRSYGGKMDETQRAKCTPSAISRRRLHTTGSSYSVSTAE RGSGNFTRSRPQIPPHRSTSSNNIPNQTALFV
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 23 | 172 | 150 | 7.4E-40 | – | |
| PANTHER | 23 | 172 | 150 | 7.4E-40 | – | |
| MobiDBLite | 33 | 59 | 27 | - | – | |
| MobiDBLite | 33 | 69 | 37 | - | – | |
| MobiDBLite | 148 | 192 | 45 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi1g1v0100800.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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