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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0117100 |
| Transcript ID | LotjaGi1g1v0117100.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Disease resistance protein; TAIR: AT3G14470.1 NB-ARC domain-containing disease resistance protein; Swiss-Prot: sp|Q7XA42|RGA1_SOLBU Putative disease resistance protein RGA1; TrEMBL-Plants: tr|G7K728|G7K728_MEDTR Disease resistance protein RGA4; Found in the gene: LotjaGi1g1v0117100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:18424577..18431223) extracted from Lotus japonicus Gifu genome v1.2.
TGCATGCTTGAGATATTTCTGGTTGTTTTTGAACCATTGAATTACTTTATCCTTGTGAGCTTTGGAAGCATCAAAAGCCT TCCACCACTTGATAAGGGCATGTTTGTTGAGAATTGGTTGGGGTTTGGCTTTAAGACCGTACCTCCAAGAGAATACCCAA GAAAGGGAAAAGATTGTATAAAAGTTTAAACAATCAGGATAATTGTTAAACTCTTTGTCCCAATCTCTCCTATTCTCTTC GATTTTCTCCTAATTTTGGCACCATAACAGAGCAAGGGAGCTGGGCTTCATGGAGGAGGGGTCCTTGGGCTAGGATTGGA TGGATTGAAGCTTCAAGATGGTGATGGCAGCTATGGGAGGACGGTGACAACCTCCCGAAAGCCTTGGAAAGCTTGGGAAA GCTTCCATGGTCGTGGTTACGTCGTCTCCTCTTGGGTTTCGGTTCTTTCTTCCCTTTCCCTTGTAGTTTTTGTTTTCTAT TTATGTATTTAGATCGTATAACCTGACTCTTTGATTGTTCTAAGTTTGTTCATTGATGTAAGTGGAAATCTTTCATGTAT GGTGTTTCTCTTTGTACTTCATGTTTCTAACCAATCAATTGATAATCAAAAGAGCTGCACTAGTTTATAAATAGATCGAG AGATTGATATGAGTTGGTGTATGCTTAGATCAATGAAAGTAGACACCTATGTCTTAGGTTCTTGCTTTCTTCTCTTCAGG TATTGATTATTTGTGTTAGATTTCTATGGACTAGCATGAGATCGGGAGATAATTGTGGGTCCGGTTCAAGAGAGAAACCA CTCAGTGAACTAGTTGTCCTAGAATAAGAATATCTTGGGTAGGAGCAATAATGGATTTCCACGTGACAGGTGGGGTTCTG AGTTCTAACAGGAGTTTCCGGAGTGACAACAGAGATTTGCAAACCTAGGGTACCTTGTCTTAGGATGAATTGGTCATTGG GAATGTCTTTGATATATATATATATATATATATATGCAACTTTTGTAATAGACTTGTCTATATATGTTTATGCAGTGCAA TCAAACACACCATGTATCAACTAGAAGACTATGCCCACACGGTCTCAAACCCTTTAAAAGGTTCTGATATCTGAGTAAAA TCTGTAAGATTTTCCCTCCCTCTCTCTCTCTCTTTAAATTTCGTTTTAAATTTTTATATTTGGCTTAGCTATAATTGATT GAGTGAGTGGATGTGCCGGAATATCTTTTGATTCTTTTCATTCCACCAAAGAAAGTATGTAGAATAATGACTCCACTAAC CAGAAAAGAAGGATGGAATTGATTAATGGGCCCCCTTTCCCTCAAAGAGAGATGCTTTTTCAAGGCTAACATTTTTGTCA ATTTTTCATACTTGCCATCAGAGATTCTACATGCTGGTCCATGTCTGCAATCATCCAAAACCATCAGAGATTTTAGAATA TACAACTAAAAATAACAATTAATAGTTGCTGCTCACAAAGGAAAAAACAATAATTTCATGTAGTAACTCCATATGCTAAA GATTAAACATATTATAACTTACATAGTGAAATTTTAGAGGGATTACAATAATTGAGCTACCGAATAATCTTTTATAAAAA GCTATATTTTTCCTACAGTGATATGTCTCCCTCCCTAGTCCTTAAAGTGGTGAATGTGAAAAACACCTGTCAGGAACATA AATGGCTACCAAGCTTTCATGATATTACCTCTCATCGTTGCACTGTTCATTGAATTATTGCACTTGCATTTTATAGTTTC CTCAAATAAACACTGCACTTGAAAATATCTTTCTTTCAGAGTTCTCTCAGTTAAGTGACTCTGCTACTGCTAGCATTGTT TTCACACTTCATCAACACTTCTTCTCTTTTCAACAAATTTTGCATCTCTGAAAATGGCAGATGCTTTGCTTGGAGCTGTG TTTGATAAGTTGCTCTCTCTGGCTCAGAACGAACTCGCAACCATTTCTGGAATCAAGGGAAAGGCTCAAAAGCTGTCACG CAATCTAGAACTGATCAAGGCTGTTGTTGAAGATGCTGAGGAGAAACAAATCACAGACAAACCCATAAAGGTTTGGCTGC AGCACCTCAAAGATGCTGTTTATGTCCTAGATGATATCCTTGATGAATGTTCCATCGAGTCCCTTCGACTTGCTGGATTG TCCTCTTTGAAACCAAAGAACATCAAGTTCCGCTATCAGATTGGCAATAGGCTCAAAGAGATTACAAGCAGATTTGATGA GATTGCTGAAGGCAAGGCCAAGTTACTTCTACAAGAGCGTGTCATGAGGGGGTGGTCAGCTGAAGAAGTTGAAGAGCGCA AAACCGGCCCTGCCATTCTCGAATCTCAAATATATGGACGACTAGATGATAAGAAGAAGATCGTGGAGTTTCTTCTCAGC CAAGAACGCCTCTCTGATTTCCTTTCCGTTTATCCGTCTCGGTGGAATGGGGAAAACGACACTTTCTCAGATGGTCTACA ATGATGATGAGGTGAGTCGCAATTTCAATCCAAAGATTTGGATTTGTGTTTCTGAGAATTTCTCGGTCAAGGGAATTTTG TGTTCCATTGTAAAATATTTCACAGAAGAAGAAAAGTACAATACCATGGATTTACCTGTAATACAAAGAAAGGTGCAAGA ATTGTTGCAAAGTAAAAGATATTTGCTGGTTCTAGACGACGTGTGGAACAAAAATCAACAAATGGAACTCGGATTAAGCC AAGTCAAATGGGACAATTTGAAGTCTGTATTATTGTCATGTGGATCCAAAGGTTCTTCTGTTTTAGTCTCCACTCGGGGA ATTAGATTTCCCACCCCCTGTTTTAGATTTCCCACCCCATTTAAAAGTGGGGAAAAACCAATATTGCCCCTCCGTGTTTT AGTCCGAAACTTCAACCTTCGGATCAGTACGAAACTTCATCCTTCGGATTAGTATGAAACTTCAACTTCCGGACACCTCT GACAGATTCTACCACCTTTTTCAGCACCATTACTCCATAGCTTCACCTACCTCACCACCATTATGGCCTGCATAAACTCC TCAACCACCCCCCATTTATGGCTGAACACACTGTTTGGATTGGTCCTCGTGTTATTACCAACTTTGATTTAACATACATA ACAGAAGATTGATAATATGATTCATGTTTGTAATGTTGTAACCATGTCTGTAACCATATTATTAGCAAGAATATTTTCCT TCAGTATTGTAACGAGGTCTGTTTGTCCCATATTATTGTCACTGCATTTTCACGTTTCTGTCTTTGTGACAGTATCTGGT TTGAAAGATCCGAATCTTGAAGTTTCATATTAATCCGGTTTTTCAACTCTCGGACGTCTAAAAAAGGGGGGTGGTAAATT TAATTATGAAGCAGTCCGAAACTTATAGTTCTGGATTGATCCGAAACTTAAAGTCCTGGATTGATCCGAAACTTAAAGTC CTGGATAGATTCGAAACTTAAAGTCCTGGATAACTCTTACCAAGCAGCAGAATGCAGTAAGTTAAGACCAAACCAAAAGG CATATTCATCAATTACAATCTCAACCACCACCACAATTACAAACCAAACATTTCAACCCAACAATTCGTTAGGCAAGTCC TCCAAGACGGCCACGACACCGATCATGTTATTTTAACTGTAACTAAAGAATCCGAACTTTTAACTCTCGGACTAGTCCAG AACATCAACCTCTGGACTGGTATGGAGGTTTAAGTCCCGGAGGGTAGTCCCGACATTTTTTTAAAAAGGCTAGGGTGGCA ATTCTAAAACAGGGGGTGGGAAATCTAATTCCCCTCCACTCGTGATATGGATGTTGCATCAATCATGGGAACGTCAACAT GTCAACCTCACTGTTTTGAAGGTCTCTCCGAGGATGATTGTTGGTTGTTGTTGAAGCAGCATGCATTTGGAGCTAACAAA GAAGAGCGTGTAGAGCTTGTAGCTATAGGCAAGGAAATCGCAAAAAAAGTGTAAGGGGTCACCTCTTGCAGCACGAGCAT TAGGAGGCCTCTTGCGCTTGAAGAATGATGAAAAGGAATGGCTTGAAGTTAAGGAAAGTAGGCTTTGGGATTTACAGGAT GAACGTATATTGCCAGCCTTGAGGTTGAGTTACTTTCATTTAACTCCACCCTTGAGGCAGTGTTTTGCTTTCTGTGCCAT ATTTCTCAAAGATACAGAAATCATCAAGGAAGATCTGATCGATCTTTGGATGGCCAATGGGTTTATCTCATCTACGACAA ACAAGGAGGTAGAAGATGTCGGTAATTCAATTTGGAATGAATTGTGTCGAAAATCATTCTTCCAAGATATCTCCACCGAA TTCTTTGGAGGTACTACGTTCAAGATGCACGACCTTGTCCACGATCTTGCTGAATCTGTCATGGGGAGAGAATGTGTTAT TTTGGAGAATGCAAGCATGAAAAATTTGTTGGGAAACACACACCACGTTCTTTACTGTGGCCAGAAAGAGTTATCATTCG ACCAGGGAACGTTCGACAAAGTTGATTCCTTGCGAACATTATATCAGCTCAAACCTTCCTATAGTGAAAAATATGCTTGC CTCCCAACACACCGCACTCTTCGGGTATTACAAACAAGTTCTTCCAATTTATCATCACTCGGGAGTTTAATTCATTTGAG GTATTTGGAGATTTATGATGTTGAGATAAAAACCCTGCCCGACTCAATTTATAGCTTGAGGAAATTGGAAATCTTGAAAT TGAAATCTTTGAGGAAACTTACTTGTCTACCAAAACACCTTAGTCGGTTACAGAATCTAAGACATCTTGTCATTGAAAGT TGTAGTTCATTGTCATGTATGTTCCCTAATATTGGAAAATTATCCGGTCTGAGAACATTAAGTGTTTACATTGTCAGTTC AAAGACAGGGCATAGCTTGGCAGAATTACATGACTTAAAACTCGGAGGAGATCTGCACATCAAAGGCCTCGAACACGTAT GCAGTTTATCTGAAGCCCAAGAGGGCAATTTGAAGGGTAAAAGCGGTCTTCACAAATTATTCTTGTCATGGGGTAGTAGC AAGGAGACCAGGTCTCATGCTACTAACACGGATGGAGTACTTGAAGGGCTTCAACCTCAGTCAAATCTCAAGGAGTTGAG AATAGATCACTATGCAGGATTAAAATCCCCAAGCTGGATTGGATTGCTCAGCAATTTAGTTGAGCTTGAACTTTCTGATT GCCAGAATATGATGCAACTCTCATCGATCAGTAAACTGCCATCTTTAAGAAGACTTGTGCTTGAGGGAATGGAAAATATG AAGTACATAGATGATGATGAATCTTACGATGGTGTGGAAGTGAGAGCTTTCCCTTGTTTAGAAGATCTCAGATTAGATGA CTTACCAAAGTTGGAGCGGTTGTTAAAAGTGGGAAAAGGGGAGATGTCTGCCGCCTATCTAAGTTGGGGATTGACAGCTG TCCTAAACTTGAGTTGCCATCATGCATTCCATCACTTACAAGCCTTACTTTATCTGATTGTACAAATGAGCAACTGAGGT CGGTCTCCCATTTCACTGGTCTTACTTCCCTCTTTCTTCGTTATGGCCTCCTGACATCCTTCCCAGTAGAACTCTTCAAC AACCTCAATGCTTTGGAGGAGCTGGAGATCGATGGGTTCAATGAGCTGGAGTGTTTACCAGAGCAAGGTTGGGAAGGTCT TCACTCCCTTCGCTGCCGGATGGTTTTCGACACCTCTCTGCACTTGAGAGACTGATCATTACGGGTTTCCCAGAATTAAA GGAGCGGTGTAAAGAGGGAACAGGGGAGGACTGGGACAAGATAGCGCATGTTCCAGACCTGAGAATTGAATGATGAAGAA GAAGACATGAATTGAATTTCTGATTTGCTCCTCTCAGTCCAATTCGGTAGGATCTCTCGTACCCCTTCCGCGTTTTTTCT ATTAATTGCGTTTCTTGTTGATATTCAATGGGATGTTCTCCAATTTCCATAGTTTTAATCATTTGAATGACATATCAAAC TTTTACGCTGTGTGTAGTGTATATTATTCAAAACATTCATCAATTAAATGGTGTTTCTTGTTTGGAAAAAAATTGTTGCT CTCTGCTCAATTGACTTCTCTCGGCTCTTCTTTATCTGGATACTGATTTTTTGGTTTACCATGGAGTTGGTACGATACAT AACTTTCTGATCAAAATAACAAATTGGGCATGATATGAGCCTTCTTTTACATGAGTTATTATTGGCAAATGTGTGCTTCC AGTAGTGCTTTTTAATTATGTTGTTTTTTGCTTGACTATGTGATCTGAATGAAACAGTTAAACATTTTAGCACAATCAAA AACATAATTTCCATAAACTGGAGCTGGTTGAATGTTGATGTATCCAAGCTAGAAATGTCATTAATTGTTGGGAAAAACAC AATAAATTTTGAAGTTGGGAATGGTATCATTGTTTAGAAAACATGATATATGAAATGGAATGATTTAGACCTGAAATTGG CACTTTTTCCCGTTTTCTTTAACCCTATGTGCAGTTTTTGTTCTTAAATTCTCACATTTCAGAGTGACATTGATTACAAA TTAGATAACACTTTGAGACCATTTTTACTGATAAATATTTACAATTTGCAGGAAGATATATGGAGTAAAGTAAATCATTC CTGGTTG
CDS sequence (LotjaGi1g1v0117100.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCAGATGCTTTGCTTGGAGCTGTGTTTGATAAGTTGCTCTCTCTGGCTCAGAACGAACTCGCAACCATTTCTGGAAT CAAGGGAAAGGCTCAAAAGCTGTCACGCAATCTAGAACTGATCAAGGCTGTTGTTGAAGATGCTGAGGAGAAACAAATCA CAGACAAACCCATAAAGGTTTGGCTGCAGCACCTCAAAGATGCTGTTTATGTCCTAGATGATATCCTTGATGAATGTTCC ATCGAGTCCCTTCGACTTGCTGGATTGTCCTCTTTGAAACCAAAGAACATCAAGTTCCGCTATCAGATTGGCAATAGGCT CAAAGAGATTACAAGCAGATTTGATGAGATTGCTGAAGGCAAGGCCAAGTTACTTCTACAAGAGCGTGTCATGAGGGGGT GGTCAGCTGAAGAAGTTGAAGAGCGCAAAACCGGCCCTGCCATTCTCGAATCTCAAATATATGGACGACTAGATGATAAG AAGAAGATCGTGGAGTTTCTTCTCAGCCAAGAACGCCTCTCTGATTTCCTTTCCGTTTATCCGTCTCGGTGGAATGGGGA AAACGACACTTTCTCAGATGGTCTACAATGA
Protein sequence (LotjaGi1g1v0117100.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MADALLGAVFDKLLSLAQNELATISGIKGKAQKLSRNLELIKAVVEDAEEKQITDKPIKVWLQHLKDAVYVLDDILDECS IESLRLAGLSSLKPKNIKFRYQIGNRLKEITSRFDEIAEGKAKLLLQERVMRGWSAEEVEERKTGPAILESQIYGRLDDK KKIVEFLLSQERLSDFLSVYPSRWNGENDTFSDGLQ
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | 2 | 119 | 118 | 1.5005E-15 | ||
| Pfam | 6 | 101 | 96 | 9.1E-25 | ||
| Coils | 31 | 51 | 21 | - | – | |
| PANTHER | 34 | 173 | 140 | 4.0E-20 | – | |
| PANTHER | 34 | 173 | 140 | 4.0E-20 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi1g1v0117100.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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