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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0154600 |
| Transcript ID | LotjaGi1g1v0154600.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | DIS3-like exonuclease 2; TAIR: AT3G03490.1 peroxin 19-1; Swiss-Prot: sp|P30530|UFO_HUMAN Tyrosine-protein kinase receptor UFO; TrEMBL-Plants: tr|G7K8W3|G7K8W3_MEDTR Uncharacterized protein; Found in the gene: LotjaGi1g1v0154600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:27419221..27424273) extracted from Lotus japonicus Gifu genome v1.2.
CGAAAAGAAGAGTGGGAAGATTGGAATGAATAATTTGATTAGGGCACACTGAGCGAAGAAGAAGATGGCTTCTGCATTTG GATGGTACGGTCCTCTCATAGATCTCCGCAAAGCTTCCAATCACATCAGCGATTTCGTTCAGCTTCTCGTCTTCGTTCAT CGCTGCTTCCCCGTTCAGGTTTCTCTCTCTTCCCTCTCTCTCACTCTCTCTCATCCTCCTTCACGTTCTCTGCTTCCTCT TCACAGTGCAAATCATCGAAACGCGGAGCGGAGTTCACCCGAACCGACATCCAAGTCGGCGATGAAACCACGCCGTATTT TGGAGTCTCCATTTGGCAGCGGGACATGGGGTCCGCCGTGGCCGCCGGCGATGTTGTGCTGTTACAGAGTAATTATCATG ATTTGAGCTGTTTGTTTGTCTGTTTATAATGTGAATTTGTTATCTGTTTTGGAACTGATTTGACTGTGTTGTTGGCAGAT TTCAAGATTGCTAAATATGGTGATGTTGTTGAGGCTAGAACTGTTCAGTGGTCTTCGCTTCTTTGCTTGGTTCGCTCTTA CCAGTTACTTGCCTCAGAGGGTTTGTTCTCTTCTCTGTGTGAATGTGTTCTCTGTTTCCTACTAACTCCAAGTTTGTTGA TGAGTGCAGTTTGTTCCTGTTTCTTTATTTTCTAAATTATGTCCTTATGTACACTTGATATTTCTCAATTACACTAACTC ATTTCACTATTGAAAAGTGCAAAGGTTAATTTAAATGTTAGAATTAAGTTTCATTCACACTCAGGGGCATAGGGAGGGGG GGGGGGGGCATGGTGGTATCATCACCTCTCCAAGCTTTTTAATTTTGTTCTTTTACATGTCATACATAGGTAATCAGATA TGCTTCTGTGAAATATTTATCAGATTTTGGTGCTACTAGACTAGACAAAGTGGCTATGATTGGTGATGCCCACATAACAT TTGCATGTTTATCACCTCACATCAATGTGCATAGTTTCCACCATTTGATTGCAAGTAAATACAACAACGACAGCAGCAAA AGTTTTATCCCGTTAAGTGAGGTCGGGGATCACACGACACCATTGCGCTCGATCAAATACAAATTTTGTGGATATTATTG ATCATGAGGCCGCTTTTAATAATATATTTCAACGTTCTTTTTGGCCTCCCTCTACCCTTCTTCACAAGACTAGGAACCAT GTTATCAACCATTCTCAGCGATGCCTCCAAAGGTCTTCTTTGCACATATCCTAACCACCTTATTTCTCCTTAATAGATGT CACACAAATATCTCCTCGATCATTGTGTATCTTGTCCTTTCTAGTTGTCCATCCATCTATCTTAAGTCTTGACCTTCTCA TTTCTGCTACGATTACTTTCTGCTCATGTTGTCTCACTATAGCTCACCATTCACTACCATAGAGGATAGCTGGTAGTATA GCAGGTTGATAAAACTTTCATTTGTGCTTGCTAGGTATTTTGCGGTCACAAATAACTCCTAGTGTTTTTCTGCTCTATAA CCAGTCAACTTTATTTTGTATGTAACGTAGATGTCAATTTGCCCATTTTGCTTTATGATAGATTCCAGATACTTAAACTG TTAATTTGTGGTGTAATGTCGTTTTCAACTTTTACTTCCATCTTTTGTCTTAATAAAATTACAATGCATATATTGCCTTA CTCCTGCTTAAGAGAAAATCCTTAGATTTCAAAGTCTTTCACCAAATCTCAGATTGAGAATTAACCTCTTCCCTTGATTC TTCAATTAGAACTATATCATCTATAAACATCATGCAGTTATGGAGGATCTTTTGTATATCCTTGGTAAGCACGTCCAAAA CCAGATTAAACAAATACAGAGTCAAGGCTGAGGCTTGATGTAAACTCATCATTATAGGAAAATCCTTAGTCACACCTCCA GGAGCTCTTATTGTAGTTGCCACCTCATACATGTCTTGTATAGAACAAATATAAGCCTCATGGGCACTTTTTTTGAGTAA ATACAGGATAGGAATCACCTATCTCTTTCTTTCATTTTCCTTTTACTAGTTACTTGTTCCTTTAATGAAAACATAACATA TTGATCAAGATATTAATAACTATACTTAGTGAAAATGATCTAGGAGAATGAATGACTAGATATTTTTGCGGTGGATGATG TGAAATGACAGAGTTGCTGGAGAATTGTCAGTACATGCAAAAGAGACTCAATGCTCAAGTCAGCATTTGAACATTATAAT GATAAAGAGAAAAATATCAAAACTGTATACTGTTGTCATCGTTATATAGTGGGTGGAGTTGTTCGAGTTAGTGGTGTGAT TGCATTCTATGTCCATGCAGATTCACTTAATTTGTGTTAAAGTTTGAGGATTCTCTTATTGTTTGTTTAATATGACTTTA GTGTTATCAGATATTTTGTGAGGTATATGTGGCTATATCCCATTTGTGGTTAATTGTCGAGTCCAGAAAAAAAAAAACTA ATAGATACAATCTTAGCCTTAAAGAAAGAGAAATTTTGTTGAAGTATTATGCTTTATTGGAATGACAAGAAAGCATGAGG GCTTACATGTGAAGGCTTTATTGGAATGACAAGAAAGCATGAGGGCTTACATGTGAAGGCAAAAAAAGTAATCATTTTAT TAACAAGATCGTTCTGTGCAGATGTTGAAGAGTTGACAACGGGTTGCCATATTGGGACAACAACAAAGGACAAGCTTAGG AGGGTCGTAAAGTGGGTGCGACAGTCTCGGTCCTCCATCTGCAACATCAAGTTGCATTCTGATCAAGTACTTTTTTTCTC TGCATTGTAATTGTTGCTTGCACTATATATTTTCACATGCATGCCTACCTATCATGAGTTGATTCTGGATGCATGTTTTA TTGATATTTTCTAAGTTATTGAAGTTTTTGAACAGCATTTCTTTTCAGCTGGTGGCTGTGTCATAAAGTCATAATATTGA TGTCTTGCATATTCTTTTCATTTATCACATTATCTGTTTTCATGATGATTAAAGTTCATCTATTCTTTTCTACTCATGCT TATTGTTCATGGAGTGCATTTGTGTGATTTGCCTTATACCTTTTATTTTCATAGAAAATTGTTATTAAGTGATGCTTTTA TCATTATTCATTAGCACATTACAAAAGTAGTTCTAATGGTAAGTTTGAGCTCGACGGTTGAGAGATATGCATCTACCTGT GGAGAAGGGCAGCCTTGGTACTTGGTGAGTGGAGTAAGCTCACTAAAAAGGGTGTGAGGATATCTCGTGAGACCAAAGAA ATTATCATTAAAACACTAACCATACAGATATTTTTAGAGGAAGAATTCAGGTTTTCTTTTGTAAGAAGAGTAGCTTGAGA GCATAGGTGTATTTCGAAATATGCGTACCTTGTTTGCACATGATCTCATGTCCTAAATTTGAGGAGCGTGCTGTTTGCTT ATGCAAATTTTGTGTTATTAGAAATGTCAGATGCCCCATTTGTTGTGCTCAAATCTAGCAATAGAAAGTTAACATCTGTT TGTTGGATGTCAAGAATAGAATATATCTATCCGGTTTTATTGTAATTCAATTGTCCTGCAAACATAACGCATAACTGATT GTGGCTATTATGATTATACCTTGTTCATTTTGTATTGTAGGTTCAAATTTCCTTAACAAAAATGGTTTTCATTGATAAGT TGACTTCTCTTTCTTAGAAATATTACTTCCATAAATATATTGCATCCCATACAATATTAAGTTCAGAGATGCTGATGAAT CTAATGAATGTGATGACAGCAAAGAGAGTATCTGCCTAAAAACTGGGCAGTGCTTGAAGAGAGAAAGCCTAAGGACTGCT GTTCACTCATGGAGGTCTCTCAGCTAACAACATTGTGCAAGACTATAGTCTGTGCATCTATTGGTGAAATTGTTCCCCTA TTTAACGCCATGACTCTCGGTGATACTGTGAAAGAGAAGATTTTCCTTAGCAGGATAGTTAACAAATCTGAGGGTAATAA CTTGGTGGAAGATCTTTTATGCTCCGGCTGCCAGCTATGTGGCTCACCCTTAGATTCAAAGTATGAGTTTAGAATGATGA TAACTTTGTTTCTGTTATGCCTTCTGTTATGGTCAGTGATCATTCTTTTCATCCGTGTTTCAGATTCGAGCAAAATGCTA TTCCACTGATTTGTTCGAAAAGCTCAAGCCGCCATCATGCAATATGTTCTATATATAGGCCTTTCATGGTAAATAATATG CATACATCCTGCTCATACTGGATTCTCTTCACCAAGATCTCATCCTATCATTTATTTGATATTGGCGATTAATTTATATG CTGCATTTGATTATAGTTACTCACATGAAACTAGAAAAATTGCTTCTTCTGTAGTTCCATATACCTCTTGTAAACTTTTT GATAAATGAAACAAGGATGGCCAAATTGATGAACTATGATGTATCTTTTTTAAGTATATAGAATTTGAAAGCATATGTTG ATATCTGGTCTGTATTTGTTTCATTAGTAAAAGTAAAAATAAGTCACGTTATAGGTCTGATTTTTAACATCGTGATTGTT CTTACAAACGTGCTTAATGCTGCTTATTGATGCAAATTTTGGCAGTTATATGTGTGGGACGAATCAGATTACATGCCAGT TCTTGTTAAGAACAGCGCTGCAGAGATCTTGTTTGGGAACATCAAGGCTGAAAAAGTCTATTCTAGTCACAGAGAACAAT TGCTTAACCAAAATCCTGGTCCAAGAAATAAATGCAGGGATAACGATGCAGATGCAAGACTTGCTAATGAACCGAGACTT TCTGGGGCCAGTGCGTTAAACGTGGGTAAGAGCTTGCAATCGGAGGAAAAGCATGATCCTGTTAAAAAGTTCAACTTTTA TCATGTATGGTTAATTTTTCTGAAAATGTTGCTGAAGCAAGGAAGGAACAGTCCTCTGAAATTTGAGATCAATGTTGATC CTACCTTAAATATTGAAAATGGAAAATTTGAAATGATTTCTGCAACGATGCCCTGCTTTGGAACTAAGTGATATGTTATC TATTATAATTTTC
CDS sequence (LotjaGi1g1v0154600.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCTTCTGCATTTGGATGGTACGGTCCTCTCATAGATCTCCGCAAAGCTTCCAATCACATCAGCGATTTCGTTCAGCT TCTCGTCTTCGTTCATCGCTGCTTCCCCGTTCAGTGCAAATCATCGAAACGCGGAGCGGAGTTCACCCGAACCGACATCC AAGTCGGCGATGAAACCACGCCGTATTTTGGAGTCTCCATTTGGCAGCGGGACATGGGGTCCGCCGTGGCCGCCGGCGAT GTTGTGCTGTTACAGAATTTCAAGATTGCTAAATATGGTGATGTTGTTGAGGCTAGAACTGTTCAGTGGTCTTCGCTTCT TTGCTTGGTTCGCTCTTACCAGTTACTTGCCTCAGAGGATGTTGAAGAGTTGACAACGGGTTGCCATATTGGGACAACAA CAAAGGACAAGCTTAGGAGGGTCGTAAAGTGGGTGCGACAGTCTCGGTCCTCCATCTGCAACATCAAGTTGCATTCTGAT CAACAAAGAGAGTATCTGCCTAAAAACTGGGCAGTGCTTGAAGAGAGAAAGCCTAAGGACTGCTGTTCACTCATGGAGGT CTCTCAGCTAACAACATTGTGCAAGACTATAGTCTGTGCATCTATTGGTGAAATTGTTCCCCTATTTAACGCCATGACTC TCGGTGATACTGTGAAAGAGAAGATTTTCCTTAGCAGGATAGTTAACAAATCTGAGGGTAATAACTTGGTGGAAGATCTT TTATGCTCCGGCTGCCAGCTATGTGGCTCACCCTTAGATTCAAAATTCGAGCAAAATGCTATTCCACTGATTTGTTCGAA AAGCTCAAGCCGCCATCATGCAATATGTTCTATATATAGGCCTTTCATGTTATATGTGTGGGACGAATCAGATTACATGC CAGTTCTTGTTAAGAACAGCGCTGCAGAGATCTTGTTTGGGAACATCAAGGCTGAAAAAGTCTATTCTAGTCACAGAGAA CAATTGCTTAACCAAAATCCTGGTCCAAGAAATAAATGCAGGGATAACGATGCAGATGCAAGACTTGCTAATGAACCGAG ACTTTCTGGGGCCAGTGCGTTAAACGTGGGTAAGAGCTTGCAATCGGAGGAAAAGCATGATCCTGTTAAAAAGTTCAACT TTTATCATGTATGGTTAATTTTTCTGAAAATGTTGCTGAAGCAAGGAAGGAACAGTCCTCTGAAATTTGAGATCAATGTT GATCCTACCTTAAATATTGAAAATGGAAAATTTGAAATGATTTCTGCAACGATGCCCTGCTTTGGAACTAAGTGA
Protein sequence (LotjaGi1g1v0154600.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MASAFGWYGPLIDLRKASNHISDFVQLLVFVHRCFPVQCKSSKRGAEFTRTDIQVGDETTPYFGVSIWQRDMGSAVAAGD VVLLQNFKIAKYGDVVEARTVQWSSLLCLVRSYQLLASEDVEELTTGCHIGTTTKDKLRRVVKWVRQSRSSICNIKLHSD QQREYLPKNWAVLEERKPKDCCSLMEVSQLTTLCKTIVCASIGEIVPLFNAMTLGDTVKEKIFLSRIVNKSEGNNLVEDL LCSGCQLCGSPLDSKFEQNAIPLICSKSSSRHHAICSIYRPFMLYVWDESDYMPVLVKNSAAEILFGNIKAEKVYSSHRE QLLNQNPGPRNKCRDNDADARLANEPRLSGASALNVGKSLQSEEKHDPVKKFNFYHVWLIFLKMLLKQGRNSPLKFEINV DPTLNIENGKFEMISATMPCFGTK
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 423 | 423 | 3.1E-171 | – | |
| Gene3D | 18 | 114 | 97 | 3.7E-5 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi1g1v0154600.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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