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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0159400 |
| Transcript ID | LotjaGi1g1v0159400.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | methionine sulfoxide reductase B 2; TAIR: AT4G08330.1 hypothetical protein; Swiss-Prot: sp|Q9STN5|Y4833_ARATH Uncharacterized protein At4g08330, chloroplastic; TrEMBL-Plants: tr|A0A0L9UZL3|A0A0L9UZL3_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0159400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:29502509..29508563) extracted from Lotus japonicus Gifu genome v1.2.
AAATAAATAGCATTATCAAAATAAAATAAAATAAATAGAGGTTTCTTTCTTTAGCTTCTGTCCTCATGATCATGACCTTG CTGTGAGCCCAGTCCATCGTAAAAACTGTGTCGTTTTGATATTCCATCTCATTCCGCTGGGTCAAACTCGCGCTTCCGAT TCGTCCGGTGCACGCTGTTCTCTCAACAATTCCAACCTAGCCCAACTCCCACAACCCCTCTCTCCCACACGCGCCACGGT GGCTTTTCTGCCACCACCGCCACCGCCACCGCCGGCGAATACTAATCAATGGATAATTCGGATATCAACAGAGATGGTCA CTACAATCGAACATACTCCTCCTTCTCCTGCTCCTCTCAGAGGGATGTCCGTTACAGGTTTCATTCTTAGAATCAACAAC AATTTCTCTTTGATTTTTATGGTTTCTTTTTGTAGTTACAAGGTTTTGGATATTCTAGGTTTAATTTATGTGTCATTGTA TTTGTTTCATTTTGACATAGATGTGAAATTTGTTGCCAATTTTAACCCTATTTCGGGAGATTGTCGTGGTTGGATACATT GTATCTGTATATGAATTGGAACTAATGATAATTAGCATAATAGTCACTTTCATACTTAATGGGGTGATTTTTATTTTGCT ACTTGATTTAAGTGGGAACTTTAGATTTGTAATTATACAGTGTGTTAGAAGTCCCGCATTGGCTAGGGATATGATTGACA TAGATAGCCTTTATAAAGGCTAGAGCAACCCTAAACTGTTGAGCTAGTTTTTTTGGTTGAATTAGGTCTCCAAAATTCTA ATAGTGTGCATTGGATTTGTGGTAGGTTTTTTTACGCATGTAGGAAGCTACTAGTAACAATACTAGATTGGGGGCTTTGT GTCACTTTTTTCACAACTAGGATTGCTTGATCATTCTAGATGAATGTGGTATGCTGAGTGATGCAGCAAACTGTTCTCCG TGATCAGCATTTGCTTTTGGTTACGATTGTGTGAGGTAGTTTGTCTCAAGATGATTTCACATGCAGATTGCAGTTGTCAC ATTAGAATAAGTTTTGTTTCTCCTTTGTCTATTATTTTGGTTAGACTTGATATGTTAGAGATTGGATGTTGACTGATGAT TCCAGATTGTAATGTAGTTTTCACTGAATATATATTCTTAAAAAAACTATAGGAACGTGATCTTTATCATTTTTTATTAT GATTTAATTAGTACCCTCCTCAAGCTCTGTTTGGATCTTAGTGGGACAAGCACCGATTGTTAGACACCTTTCATGGAAAA GGAGCCAATCATTTACCAAAACTTGATTGAGATGAGGGTTTGACGATTTGGATTGTGCATCTTGGGAAGTGCTATAGTTT GAGCATCTTGAACTTAAAAATGCTATAATTTGAGCATCTTTGATGATATTCCATTTCCCTTTCAATGTAAACGAGCCATA GGCCAAATTCTTCTAACATGATCTTTATTATAATAACCATTTCTTCTTCAAACGTCATTATGTACATTGAAGACATGACT TGTTATTTTGATTATGATTTCCATGGATGAAACTTTTCTTGTTGCAATGACAATTTGTTATCTCTATATTTTGGCAGCTG TGGCAACTGTGGTTATGAGCTGAACCTATCCTCCTCAAACCGAAACTTCTCATCCATAGGATCTAAATATGGGAAGTCCA TAAGGCGAGGTATTATATCATTCTTCAATATTGATGATAGCAGATTTACCCGGGTTGATGAACTTCAGTGTGTGCCCCAT TTTAGTAAGCACTCATGGGGCTTGTTCCGCCGAAGAACTAAGCTGCTTTGTCGCAAGTGCGGCAACCACATTGGAAATGC ACACAATGGTTACACTTCATCCTTCCCTCTTGTGTCAGACGGAGCAGAATCATCTCCTGCCTCTGAAGCGGCCAGTCATA TTAAATATGACATTCGCCTTCGTGCCTTACAACCTTCATCTTCTGAAGAATCTCGAATCCCTGTGTTTACTTGAGAATAC CTGGTAAAAATTGTTCTAACCCTTCCTACATAGTAATCACCTGCATCCTTGAGGCTAGAAGTTTATTAATAAATGCAGAG TTCCGGTTTGGTAAGTTATCTGTTTTTTACCTCATCCAAATGTAAATAGAGCCAGTTTGGATGCGGACTAAATAACACTT ATTGGAGCTTATTCATTGCTCTTTTTTGGGTAGATATGCTCTAATAAGTGCTCTTTATTCCGTATCCAAACAAGTCATAA TAGCTGAATGTAATGGTTTTAAGAATTAATTTAAAATCTGCTTAAGGTGTGACATTCTGTGAGCTATTTTGAATTGGCAG ATTCCAAGGTTTTATATATTTTGGGAAGAAAAGTAGAAATTAAAAGGAAAGGGGAAAAATGTTATTTCGATATAAATTGT TTGAATAGTGTGCTTCGAAGATGCTCTTTAACATCGACTTACATTTTATAATGTCTTTTACAAATAACTTGTTTGCGATA TTGTCTTAATTGAAAAGAAATGTTGAAAGTTATAAATTTTAATTAGAAATCAAACACATGAAACAGGTGTTTAGATTGGA TCAAAGAAAATAAAGGTCTTCCATGTGAAATGAAAATATTTTAATTTTTATCAAATCAACTAGTACTTTTACCCGTGCGA TGCACGGGGGATATTCATTTTTGTGTGTTTCTTTTAACTTGCGTGTTTTTTAGAGATATTTTATGGATTAAACAAACTAA ATTTATTTTAGATATATGAAATCAAAAATTTGTAATTTTTTCTGTACTTATAGTTTGTTTTTGTTTTTTTGAGTTGCTAT TTTATTTTTATCTTTTGTATTTGTTTTCCTAAATGCTCAATTGATGGTATTTTTATATCTATTGAATAATTTATTGCATG GAGTTAAAGTAACATATATATACTAAAAATAGCCACGAAAGTTTTTTGCAATTGAATTAATTACATTGAGAATAAAGCTG AGAGTGTATCGTTGCACATTTCCTGTAAAAAGATCTTCTTCATATAAAATTGTGAAAGACTTATTTGTAAATTACATTTG AAGTTCTATGAATATTGTTGTCATCACTATCGCAAATAGAGATTCTTAATCTTTACGGTGCGTGGCTTTGGAGAATGCTA CATATAATTGGTCATGTGAAAACACTTATTTGGAAAATATAACCCCATTTTTTTAATGATTGTCCTTAACTTTTGTTTAT TATCATGGAAAAAGAGAATGCTATAGGAAATTGTGTACTTCGAAATTTAAAAGGAATTCTACTATCTGATGAAGTTAATG TTAATCTTGGTACATACACTCTTTGTCTGGCATTTGCTCTAGAGATAACCTTTGCTTTCAAACATATGTCCTTATTCGAG TAATAATCAAACGTGTATCATTGCACATTTCAGCTGATTGGTCTATGTTCTTATAAGCATTATTGAAGCACCAATTTTTA ACCTTAATTGACAATTAGACAAACCGGAAGAGTGTATTGTGTTTAAAAACTCTGGTGTGTGGATATCATATTGGCTGTCA CAATTGTTGTATGAAGACATATCGTCAGTCAAATAAGTTTTCTCTTCTTCAAGCAACAATGACATCATGTATTTATTCAA ATTATCAACGATCTCATTTGTAGGAGTTAAAATAGCACATCGTTGACAAAATTGTGGAGCTTTGTAGTTTTCAAGGAAAG ATGGATAAGTAGACTTAACTATAGAAGTCATTGGATCACTTGTATGTGGAATAAAAAATTCTCGAGGGATGTTCAGGGCA TTTTCATCTTATATGTGCTTACCTGCATTTTCATCTTACTCAGCAACCTCTGCATCTAATCTTCCGGTTTAGTCTCATTT TTTGTCAATTAAAGTGCCTACTCATGTTCCAAAAATAAGAACTATTATTATAGTTGGTGTTAATAGTTTACAGTAGTCAT TTTAGATTTTTTTGGGTCAAATTTGTGAAGCATAAAATATTTTATTAAATTATATTATTGTTAGAAATATATGTTCTAAT GGGTTAATTTTTATTTGGTTTTGTAATGATTGATTAAATTGAAAACTGACATTATAGGGATAAATGTGAAAGTACCTGAC AATGATCTCAAAGATAAGAGGCATTGACAATGGCATGGATAATATCCTGCATTCTACCCTTATACACAACTGTTAAAAAT TTGCCTAAAGTCTCCTTGAAGTACCACATTTAGAATATTTATTTTATTTTATAACTTCTATATTAGTAAGCACATGTAAA TAGAATTTTCAGAGTGGTAAAGTTTTTGTCCAATTGATTAAACTATTTTTGTGTGTGTTGTGAACAGTTCATTGGACGTG TTTTTTTCATTGTAATTAATAATTATGTTTAATTCAAAATTTAGTCTCAAATGCAAATTACCTCAGTAAACGTCCAAAAT CCGGATTTTCTTGTGTGACGATTTTGAAACTGTAAGAGTTTGCATTTACATATAGACACTTTCTATGCGTGGAAATGTAG AATGCTAGAACCAAGATTAGAACTTCAAAATTCAAAATGCAATACCTAAATATAATATCCACACTCCAATTAATGTGGAT ATTCTGAAGAACAAAGACTCTATAGATTAAATTTAGGTGAGCTATAATGGCTACCTAGTGATGTGTCTCAAGATGTTGAA GGAAGGGAACAAAGATAAAAAAATTACATTATTACAGAGCTACAGGAAGGGAACACATTTTAATTCATATTTATTCCATT TCACGGTGTGCACTGTGCAACACTTAGAAGAAGAATCATCAAATTATTCTTTCCCATTTATGTAAAAAATGTTTTGTTCA CAAATGAAATATTCACGTCCACCTTGTGGGATAAAGAAGAAATGAGAGATATGATAGATGATATGATAAGAATAGAAGAG AGATATAGGAAGAGAAATGTGTGGAAATGAGATGGAAGAGAAATATGAGTGTAAATGAATACTCAACTTCAGTCTCAAGT TTTTTTACACTTGAGAGGATCGATGTTCCATTTTCACAACAACAACAAAGCGGTTTTAAAATCAAAATCCAAAAACTTTC GGGAGAAAATTCTTCGGAAAGCACCTAAATCAAAACATGCAACAAAAGCTTTCAGATGTCGAAGTGAAAATACACGAAGA AGACAAATAATTAAGAATTCTTCCCACCAGCGGAAGAGGACCACGAAGCACTTCACCTGTTAACATAAAGAGAAAATTTA GAGTAATCAGTACACCATATTTAAAATGAAAAAAATGGAGAAATGTAACGACTGTAACTACAATCAGAATATGTGTAATT GTGTATGATAAATACAAACATTTTGCTTGAAAAAACAAAGGGTCGAACTGAAAAGTCACAAAAAATGAAATTAAAAGAGG ATTTTACCAAGAGAGGACAATAGAAGCACAAATTGAAAGGAAGCATGAGTGAGAAAACAATAGGCCGAAATCAAAACATG AAACTGAAAGAAGCTCAGTCTTCAGATGTTGAAGTGGAAATACATGAAGAAAAAATTGAGGACTTACCGGAGCGGAAGAG GACAATAAGAAGCACTTCACCTGTTAACACAATGGAAAGGAAAATAAGTTAAGGAAATTAAGTTAGTACATTGTATTCAA GATGGAGAAAAAAGGGTGAAAATTGGAGGGTTCAGGACCTCAAAATGATTAAAAGAAAAGGGTGACATTCTGATATAGCC ATATAGTTGAACCTGCGTAGTTGGTAGATCAATAGTTAATCAAAATTCTAATCCTGACAATTTAAAAAAATTTAGGGACT AAATCTGCTAAAAAATATAAGGGAAACCAAAATTACACATGGTATTGTTGAGGGACTAAAAGTACAATTAACTCTGTATG TTTTTGTGGTGCACAAAACGAATTAAAAAAGGAAGGAAAATAGGACTAATTCCTATATCCAGTTACTTGTCTTCTTTGAG CTTGAAAGAATCCTAATTTGATTAACCACCACTGCAGGTAATCCTTCTGGTCTCAAATATTGCGTATGAATAGAACTCTG AATCGCCTCTTCATAATATATACCCGTAAAAACAATTTATATGAAGCAATGTGGA
CDS sequence (LotjaGi1g1v0159400.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGATAATTCGGATATCAACAGAGATGGTCACTACAATCGAACATACTCCTCCTTCTCCTGCTCCTCTCAGAGGGATGT CCGTTACAGCTGTGGCAACTGTGGTTATGAGCTGAACCTATCCTCCTCAAACCGAAACTTCTCATCCATAGGATCTAAAT ATGGGAAGTCCATAAGGCGAGGTATTATATCATTCTTCAATATTGATGATAGCAGATTTACCCGGGTTGATGAACTTCAG TGTGTGCCCCATTTTAGTAAGCACTCATGGGGCTTGTTCCGCCGAAGAACTAAGCTGCTTTGTCGCAAGTGCGGCAACCA CATTGGAAATGCACACAATGGTTACACTTCATCCTTCCCTCTTGTGTCAGACGGAGCAGAATCATCTCCTGCCTCTGAAG CGGCCAGTCATATTAAATATGACATTCGCCTTCGTGCCTTACAACCTTCATCTTCTGAAGAATCTCGAATCCCTGTGTTT ACTTGA
Protein sequence (LotjaGi1g1v0159400.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MDNSDINRDGHYNRTYSSFSCSSQRDVRYSCGNCGYELNLSSSNRNFSSIGSKYGKSIRRGIISFFNIDDSRFTRVDELQ CVPHFSKHSWGLFRRRTKLLCRKCGNHIGNAHNGYTSSFPLVSDGAESSPASEAASHIKYDIRLRALQPSSSEESRIPVF T
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 15 | 159 | 145 | 2.1E-70 | – | |
| PANTHER | 15 | 159 | 145 | 2.1E-70 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi1g1v0159400.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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