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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0167000 |
| Transcript ID | LotjaGi1g1v0167000.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Transposon protein, putative, Mutator sub-class; TAIR: AT1G06740.1 MuDR family transposase; Swiss-Prot: sp|Q7Z5P9|MUC19_HUMAN Mucin-19; TrEMBL-Plants: tr|A0A0B2SI26|A0A0B2SI26_GLYSO Uncharacterized protein; Found in the gene: LotjaGi1g1v0167000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:31741246..31744546) extracted from Lotus japonicus Gifu genome v1.2.
GTGGAGCACAACTCTGAGAGAGAGAGAAACAAAAAGAGAAGGAACAATTCTCTGATGTGGAGATTGTAGAAATAACTGAG GAAATTGATGAAGTGAGGGTTGATGAGGTGAGGGTTGATGAGGTGAGAGTGGATGAGGTCATAACTGAGAATGATGTTGA GGAAATTGATCGCATAATTGATCAAGTTCTTAGCTCCAATGAGGTCAGGGATCAACAGGTGAATGATGAAAATGCTGTTG GTGGTAGTGAGGAGAGGGTTGAAGAGGTTAATGTTGAAAATGGTGTTGCTGGCAGTGAGGAGAGGGTTGAAGAGGTTAAT GCTGAAAAGGAAGATTCTGATTCAGGAGATGAAGAGTTCAAGCCAATAGAAAATGAGAGTGATACTGACAGTGACTACTC ATTTGATTATTCTGACTATGAGGAGAATTATGACTGGTTGAGTGTGTTGCCTGCTGAATCTTTGCTGAATCTTCCCCCAG AACCTGGTTTAATTTTGCTCCATCTATTCTTGAGGGTGCTCCACCTAATCTATCAAATCCATCCAAATTTTCCGACTTTG ATGATAAAGATGGTAATTCAGAGGACTATGACAGCCCGGATGGTAGTGATGGAGAAGAAAGCAGTAAGAAGAATTTCCCC ATGTTTAGGCAACCACTTGAAGGTGAATTAGTACATTTTAAAAAGGGTCAAGTGTTCAAGTCTAAAGCTCAGTTTATTGC AGCAGTGAGGGACTATGCTCTTGAACAAAGGAAGAATCTTAAGTTTGTAAAAAATGATAAGGTCAGGGTGCTTGTACAGT GTGTTGAAGGATGTCCATGTTATATGAGGATTACCAAAACCAAATCCAGACCATACTTTCAATTAGTTGGTTTTAATCCT GAGCATACATGTTGTAGAACTGCAGGGAATAGGCAGACAACCTCATCATGGCTTGGAAGGAAGCTCATGCCTGTCCTAAG ACATGTCCCAAACATGAAGCGTGCTGGAATTATTGATGAGGAGAGAGCAAGGTGGGGCATTTTGATTGACAAAGATAAGG CATATAGGGTCAGAGTTGCAGCTTCAGAAATGCTTCAGGGAGCAAGCCAGGATCAGTATTTTCATGTGAGGCAGTATGCT GCTGAATTGATAAGAAGCAACCCGGGAACCACTGCAGTCATAAAGACAGCTGATGAGGGTGACCATGATGTGTTTCAGAG AATATATGTATGTTTTTCAGCAACAAAAAATGCATTTGCAAGACACTGTAGGCCCTTAATTGGCCTAGATGGTTGCTTTC TGAAGGGTTTATATGGAGGACAGTTGCTGACTGCAGTTGGGAAAGATGGAAACAATCAGATGTTTCCCATAGCTTATGCA GTTGTGGAGGCTGAAACTAGTGAGTCATGGGCATGGTTTGTGAGGCTTCTGATTGATGATCTTAATAGTGTGGAACAAAA GAACTAGGCATTTATTTCTGACCAACAAAAGGTCCAATGTTTACTTTTATGTTCACAAATGCTTTAATATTATTACTTCT AATTGCTTACTTAACTTACATTGATTTATGTAGGGTCTGGTACCTACTCTTCGAGCCTTGGGTCACAATGTAGAACACAG ACTCTGTGTGAAGCACCTGTATGGGAATTTCAAGAAGAGGTTTCCTGGCAATGAATTGAAGCTTGCAATGTGGTCTGCAG CTAGAGATAACACTAGTGTTGAGTTCAATGTTGCTATGGATGAATTGAAAGCTCTGAATGAGGATGTTTGGCAGGAGTTG AGGCAGATTCCTGCTAATCAGTGGTCCAGATCTGCTTATAGCACAGCCACATGTTGTGACCTTCAGGTCAACAACATGTG TGAAGCTTTTAACCGAGCTATCCTTGAGCACAGGGACAAACCCATCATCACTCTCTTGGAAGGACTCAAATTCTATATGA CAAATAGAATTGTGAAACAGAGAAGTCTGATGCAAAGGTGGACCACTGGCTTATGTCCCTCAGTTCAGCAAAAACTGGAA ATATCTAAGGATTATTCTGACAGATGGACTGCACTTTGGATTGGGGATATTCCAATGGATGAATTTGAAGTGTCAAAGAA TGAACATAAGTATGTTGTGAATCTAGGGCATGGAACCTGTGCTTGTAGGAGATGGCAGCTATCTGGAATTCCATGTGCCC ATGCGGTGGCTTGCATGTGGCATTGGAACCGTGCACTTGAGGACTATGTAAACATTGCATATAGGTAAAGTACATATACA TTGTTGAATCATTGGCTTCATGTGATATAATTGCTAATTCATCTTGTTTGTAATTGTAGGAGATCCACATTCTTGGATAC TTACTCATATTTGATCCGAGCCAATAATGGGCCAAAGTTATGGGCTGCTGTCCCAGGTCTTCGCATTACCCCACCTTATA TGAGAAGAGATGTGGGGAGGCCCAAGAAAGCTAGAAGGAAGAACAATGATGAGAAGAAGAACCCAAACTCACTAAGAAGG TACAACAAAACTGCGCAATGCAAGAGATGTGGAGAATATAGGCATAACAAGAGGACTTGCAAAGGAAAGGCTGCAGCTGA CAGGGAAATTCCTATTGGAGGAAACCAGGTAAATATATCACACATTCTTGGTGAATTCCCTGACTGTTATTGAAGTTATT TTTTAACAATCATTAACGATTGTTCTTGTATTTCAGACCGACAACAAGAGATTGCATCCTGAGATGAGAAAGAAGAGGAG TGCTGGAGGTATAAGCATCAATGAACCTGGTTCAAGTTCTCAGCAACCAGAGTCCCAACCTGTAACTCAGGACATGCCTC CACCAACTCAACCTTCCCAAACCCAACCTACTGAAGACATGCCTCAAACAAGAGGTAAAGCAAAGGGAAAGGCAGTTGCA ACTGGCAGTGGCAGTGGTACTGCAGCAAAGAGAAAGAAACTTGCAACTGGAAGTGGTGATGCAGCAAAGGGAAAGGAACC TGAAACTGGCAGTGGTGATGCAGCAAAGGGAAAAGCTACTAAGAAGAGGACTTATAAGGGCACTAAGAAGTGATATGTAC TTCTTTGGATAGTTTACATGTCATTATGTTTTGCATTAGTATTTTGGTAGTTGTGTTGTATTAATGACCAAGGCTTATGA GCCATACTTTATTTTGGACCATGTATTTGTGTTTCAGTTCTGAACCACTTCATTTTGTGATGGATGTATTAATGACTAAG GCTTATGAGTCATACTTTATTTTGGACCATGTATTTGTATTTCAGTTCTGAACCACTTCATTTTGTGATGGATGTATTAA TGACTAAGGCTTATGAGCCAT
CDS sequence (LotjaGi1g1v0167000.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTGGTCTGCAGCTAGAGATAACACTAGTGTTGAGTTCAATGTTGCTATGGATGAATTGAAAGCTCTGAATGAGGATGT TTGGCAGGAGTTGAGGCAGATTCCTGCTAATCAGTGGTCCAGATCTGCTTATAGCACAGCCACATGTTGTGACCTTCAGG TCAACAACATGTGTGAAGCTTTTAACCGAGCTATCCTTGAGCACAGGGACAAACCCATCATCACTCTCTTGGAAGGACTC AAATTCTATATGACAAATAGAATTGTGAAACAGAGAAGTCTGATGCAAAGGTGGACCACTGGCTTATGTCCCTCAGTTCA GCAAAAACTGGAAATATCTAAGGATTATTCTGACAGATGGACTGCACTTTGGATTGGGGATATTCCAATGGATGAATTTG AAGTGTCAAAGAATGAACATAAGTATGTTGTGAATCTAGGGCATGGAACCTGTGCTTGTAGGAGATGGCAGCTATCTGGA ATTCCATGTGCCCATGCGGTGGCTTGCATGTGGCATTGGAACCGTGCACTTGAGGACTATGTAAACATTGCATATAGGAG ATCCACATTCTTGGATACTTACTCATATTTGATCCGAGCCAATAATGGGCCAAAGTTATGGGCTGCTGTCCCAGGTCTTC GCATTACCCCACCTTATATGAGAAGAGATGTGGGGAGGCCCAAGAAAGCTAGAAGGAAGAACAATGATGAGAAGAAGAAC CCAAACTCACTAAGAAGGTACAACAAAACTGCGCAATGCAAGAGATGTGGAGAATATAGGCATAACAAGAGGACTTGCAA AGGAAAGGCTGCAGCTGACAGGGAAATTCCTATTGGAGGAAACCAGACCGACAACAAGAGATTGCATCCTGAGATGAGAA AGAAGAGGAGTGCTGGAGGTATAAGCATCAATGAACCTGGTTCAAGTTCTCAGCAACCAGAGTCCCAACCTGTAACTCAG GACATGCCTCCACCAACTCAACCTTCCCAAACCCAACCTACTGAAGACATGCCTCAAACAAGAGGTAAAGCAAAGGGAAA GGCAGTTGCAACTGGCAGTGGCAGTGGTACTGCAGCAAAGAGAAAGAAACTTGCAACTGGAAGTGGTGATGCAGCAAAGG GAAAGGAACCTGAAACTGGCAGTGGTGATGCAGCAAAGGGAAAAGCTACTAAGAAGAGGACTTATAAGGGCACTAAGAAG TGA
Protein sequence (LotjaGi1g1v0167000.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MWSAARDNTSVEFNVAMDELKALNEDVWQELRQIPANQWSRSAYSTATCCDLQVNNMCEAFNRAILEHRDKPIITLLEGL KFYMTNRIVKQRSLMQRWTTGLCPSVQQKLEISKDYSDRWTALWIGDIPMDEFEVSKNEHKYVVNLGHGTCACRRWQLSG IPCAHAVACMWHWNRALEDYVNIAYRRSTFLDTYSYLIRANNGPKLWAAVPGLRITPPYMRRDVGRPKKARRKNNDEKKN PNSLRRYNKTAQCKRCGEYRHNKRTCKGKAAADREIPIGGNQTDNKRLHPEMRKKRSAGGISINEPGSSSQQPESQPVTQ DMPPPTQPSQTQPTEDMPQTRGKAKGKAVATGSGSGTAAKRKKLATGSGDAAKGKEPETGSGDAAKGKATKKRTYKGTKK
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 16 | 275 | 260 | 3.1E-39 | – | |
| PANTHER | 16 | 275 | 260 | 3.1E-39 | – | |
| Pfam | 142 | 168 | 27 | 1.9E-6 | ||
| ProSiteProfiles | 142 | 174 | 33 | 9.891 | ||
| SMART | 149 | 176 | 28 | 3.1E-6 | ||
| MobiDBLite | 218 | 249 | 32 | - | – | |
| MobiDBLite | 221 | 244 | 24 | - | – | |
| MobiDBLite | 263 | 400 | 138 | - | – | |
| MobiDBLite | 302 | 317 | 16 | - | – | |
| MobiDBLite | 376 | 390 | 15 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Zinc ion binding | Interacting selectively and non-covalently with zinc (Zn) ions. |
Expression pattern of LotjaGi1g1v0167000.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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