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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0171900 |
| Transcript ID | LotjaGi1g1v0171900.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Abscisic acid receptor; TAIR: AT5G53160.2 regulatory components of ABA receptor 3; Swiss-Prot: sp|Q9FGM1|PYL8_ARATH Abscisic acid receptor PYL8; TrEMBL-Plants: tr|A0A151TYL2|A0A151TYL2_CAJCA Uncharacterized protein; Found in the gene: LotjaGi1g1v0171900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:32761968..32764294) extracted from Lotus japonicus Gifu genome v1.2.
GGGAATGGGAATGGTGGATTCAGCAGCTTGGAGATGGAGTATATAAGAAGGCACCATCGGCATCAGCCTGGGGAGAATCA GTGTGCCTCTGCGGTTGTTAAGCATATCAGAGCACCGGTTCCTCAGGTAATTGAATTGAATTGAATCAGTGTGAATATTT CAATTTCGCTTGCATCACTGTGTTTGAGTGTTTTTTTTTTCTTGTTTTGAATGATGGTGTTTGGGAATTGCTGGTTTGAT TATGGAGGTTTTGGGAAATCATGTTTTGGTTTTGGTGATTTGGGTAGGAGCATGATGAAACAGTTATGTCTGATTTGGTT AGGGGGATGTGAAAATGTTGGAAGCTTTTTTTGGGTCTGTTTTCATGGTTGACCTGCTTCTCAGCACTGTTTGGTCTGCT TGTACTTTTTAGGTTTTGGCAATGAATGTTTGTGTTAGGAACTTGAGTGGGAGAATGATCAGTGTTATTTCCGCTATTTG CCGCCAAATAGCGGCCGAAATAGCGGATTTTTGGCTCTCCGCGATCGCGATTTGATAACACTGAGAATGATGAAAAACCT TGTTGTTGTCAAATAATGAAAAACCACAAGATAGTGTGTGATTCTTGTGAAGTGTTTATATTCATAATCCTGCTACAGAA GCTGTAATTTTGACTAATTGATGCTCTTGTTATTCTATTTCAGCAAACAAACAAGAAATATCCGCGAGCCTTTTGCTCGT CTAAAAAACTTGCAGTAGGAATTTTCAATTTTGGATTTAGTGGACTGATTCTTGATTTTTTTAGTGAGGATTTTTAGATT CTGTTTTTTGGTTCATTGAATATTCTGTCTGCTTGGTTTGGTTGGTACAGTAGTATATTACCATGGTTGAATCATTACCT TTTACCTGAAAAATTGACCAAGCTTGAAGCTAAACCAAATTTAGTTCTATTTTCTATTCCTCCTCCGTGCCACTGCTATT TATCGTGTGTTTGTTTTTCGTTCGCATTAACACAGACATGATTTCACGGGTTGCAAAACTCAAACTGAGAAGCTGAATTT TGTGGTGTTGAATTCAACGTGATCCAAATACACTATATAAAGAGTTTGGTGTGCTTTATTATAATGTTTTCTGATAATGC ATTAAAAAATTTCATTGACACTGATTGAATTGTTGTGTTCAGCACTTCAGCTAGCACCTACCCTGTGCTGAGAAATTGTT AATTTATCATGCATTGATTTTCTTTTTTTCAATTCTTCTAATCTAGGTGTGGTCCTTGGTGAGGAGGTTTGATCAGCCAC AGAAGTACAAGCCGTTTGTAAGCAGATGCATTGTAAGAGGAAACCTTGAGATTGGGAGTCTGAGAGAAGTTGATGTAAAG TCAGGGCTTCCGGCTACTACAAGTACAGAGAGATTGGAGCTCCTTGATGATGATGAACATATCCTCAGCATCAGGATTAT TGGCGGTGATCATAGACTCAGAGTATGGATATATCTTAGCAACAAATCAACTCATTCCCTTTTAAATTTATTTTTCTGAT AATTTATTTGTCTTGTTTGAATATAAGTTCATGTGTAAGTTGGACTTCTTGCCAATTGGAAGGACGTTAAACTAAGGTGA TATTATTTTGATAACTTAAAAATCTCTACTTCATAACTCTGATGTTGGTGCTGACGGTGAGGCCTTTATGTTTATTGATT AGGTGAACACATTGTGTTTCATTTATATAGTTGTCTGCATGTGAGTATTTGCTTGGATGAGGCAAGATGCTGAATAATGC CAGTGCATTCTTTGTCACTTCTAATATTATTATATTCTTGCAAGATACTGAAATGTTTCAGCTCTTCCTAACATTGTGAA CTTTGGCTCTTTCTTTTGGGATATAGTGAATCTTTTAAATTTGTCTTCCTCCTTCGCTTTCTGAAGGTGAATTAATTAAC TATTCTGATGCATATGATGGTTTTTTCTTTTTCACTTCAAAACATGCAGGAATAATCAGGCTCTTAATCTAAGTGTATTT GTTTTCTGTAATTATTGGTTATATTTTGCCCACAATCTTACTCCCTAAAGAAATAAATAAAAATTTAGCTTTTAATCTAA TAATATATTTTCTCTTTCAGAACTATTCCTCTATCTTGTCCCTGCACCCAGAAATTATTGATGGAAGGCCAGGTACACTG GTAATTGAATCTTTTGTGGTGGATGTACCTGAGGGTAACACCAAGGACGAGACCTGCTACTTCGTTGAAGCCTTAATTAA GTGCAATCTCAAATCACTTGCTGATGTTTCAGAAGGGCTTGCCTTACAAGATCGCACTGAACCAATCGATCAGATATAGG AGCTTAA
CDS sequence (LotjaGi1g1v0171900.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAGTATATAAGAAGGCACCATCGGCATCAGCCTGGGGAGAATCAGTGTGCCTCTGCGGTTGTTAAGCATATCAGAGC ACCGGTTCCTCAGGTGTGGTCCTTGGTGAGGAGGTTTGATCAGCCACAGAAGTACAAGCCGTTTGTAAGCAGATGCATTG TAAGAGGAAACCTTGAGATTGGGAGTCTGAGAGAAGTTGATGTAAAGTCAGGGCTTCCGGCTACTACAAGTACAGAGAGA TTGGAGCTCCTTGATGATGATGAACATATCCTCAGCATCAGGATTATTGGCGGTGATCATAGACTCAGAAACTATTCCTC TATCTTGTCCCTGCACCCAGAAATTATTGATGGAAGGCCAGGTACACTGGTAATTGAATCTTTTGTGGTGGATGTACCTG AGGGTAACACCAAGGACGAGACCTGCTACTTCGTTGAAGCCTTAATTAAGTGCAATCTCAAATCACTTGCTGATGTTTCA GAAGGGCTTGCCTTACAAGATCGCACTGAACCAATCGATCAGATATAG
Protein sequence (LotjaGi1g1v0171900.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MEYIRRHHRHQPGENQCASAVVKHIRAPVPQVWSLVRRFDQPQKYKPFVSRCIVRGNLEIGSLREVDVKSGLPATTSTER LELLDDDEHILSIRIIGGDHRLRNYSSILSLHPEIIDGRPGTLVIESFVVDVPEGNTKDETCYFVEALIKCNLKSLADVS EGLALQDRTEPIDQI
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 1 | 163 | 163 | 2.6E-77 | ||
| PANTHER | 2 | 166 | 165 | 5.0E-107 | – | |
| PANTHER | 2 | 166 | 165 | 5.0E-107 | – | |
| SUPERFAMILY | 19 | 158 | 140 | 2.02E-32 | – | |
| Pfam | 20 | 161 | 142 | 1.2E-19 | ||
| CDD | 21 | 161 | 141 | 3.05019E-35 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi1g1v0171900.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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