Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0171900 |
| Transcript ID | LotjaGi1g1v0171900.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Abscisic acid receptor; TAIR: AT5G53160.2 regulatory components of ABA receptor 3; Swiss-Prot: sp|Q9FGM1|PYL8_ARATH Abscisic acid receptor PYL8; TrEMBL-Plants: tr|A0A151TYL2|A0A151TYL2_CAJCA Uncharacterized protein; Found in the gene: LotjaGi1g1v0171900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:32761969..32764315) extracted from Lotus japonicus Gifu genome v1.2.
ATGAATGGGATTGGTGGGATTGGGAATGGGAATGGTGGATTCAGCAGCTTGGAGATGGAGTATATAAGAAGGCACCATCG GCATCAGCCTGGGGAGAATCAGTGTGCCTCTGCGGTTGTTAAGCATATCAGAGCACCGGTTCCTCAGGTAATTGAATTGA ATTGAATCAGTGTGAATATTTCAATTTCGCTTGCATCACTGTGTTTGAGTGTTTTTTTTTTCTTGTTTTGAATGATGGTG TTTGGGAATTGCTGGTTTGATTATGGAGGTTTTGGGAAATCATGTTTTGGTTTTGGTGATTTGGGTAGGAGCATGATGAA ACAGTTATGTCTGATTTGGTTAGGGGGATGTGAAAATGTTGGAAGCTTTTTTTGGGTCTGTTTTCATGGTTGACCTGCTT CTCAGCACTGTTTGGTCTGCTTGTACTTTTTAGGTTTTGGCAATGAATGTTTGTGTTAGGAACTTGAGTGGGAGAATGAT CAGTGTTATTTCCGCTATTTGCCGCCAAATAGCGGCCGAAATAGCGGATTTTTGGCTCTCCGCGATCGCGATTTGATAAC ACTGAGAATGATGAAAAACCTTGTTGTTGTCAAATAATGAAAAACCACAAGATAGTGTGTGATTCTTGTGAAGTGTTTAT ATTCATAATCCTGCTACAGAAGCTGTAATTTTGACTAATTGATGCTCTTGTTATTCTATTTCAGCAAACAAACAAGAAAT ATCCGCGAGCCTTTTGCTCGTCTAAAAAACTTGCAGTAGGAATTTTCAATTTTGGATTTAGTGGACTGATTCTTGATTTT TTTAGTGAGGATTTTTAGATTCTGTTTTTTGGTTCATTGAATATTCTGTCTGCTTGGTTTGGTTGGTACAGTAGTATATT ACCATGGTTGAATCATTACCTTTTACCTGAAAAATTGACCAAGCTTGAAGCTAAACCAAATTTAGTTCTATTTTCTATTC CTCCTCCGTGCCACTGCTATTTATCGTGTGTTTGTTTTTCGTTCGCATTAACACAGACATGATTTCACGGGTTGCAAAAC TCAAACTGAGAAGCTGAATTTTGTGGTGTTGAATTCAACGTGATCCAAATACACTATATAAAGAGTTTGGTGTGCTTTAT TATAATGTTTTCTGATAATGCATTAAAAAATTTCATTGACACTGATTGAATTGTTGTGTTCAGCACTTCAGCTAGCACCT ACCCTGTGCTGAGAAATTGTTAATTTATCATGCATTGATTTTCTTTTTTTCAATTCTTCTAATCTAGGTGTGGTCCTTGG TGAGGAGGTTTGATCAGCCACAGAAGTACAAGCCGTTTGTAAGCAGATGCATTGTAAGAGGAAACCTTGAGATTGGGAGT CTGAGAGAAGTTGATGTAAAGTCAGGGCTTCCGGCTACTACAAGTACAGAGAGATTGGAGCTCCTTGATGATGATGAACA TATCCTCAGCATCAGGATTATTGGCGGTGATCATAGACTCAGAGTATGGATATATCTTAGCAACAAATCAACTCATTCCC TTTTAAATTTATTTTTCTGATAATTTATTTGTCTTGTTTGAATATAAGTTCATGTGTAAGTTGGACTTCTTGCCAATTGG AAGGACGTTAAACTAAGGTGATATTATTTTGATAACTTAAAAATCTCTACTTCATAACTCTGATGTTGGTGCTGACGGTG AGGCCTTTATGTTTATTGATTAGGTGAACACATTGTGTTTCATTTATATAGTTGTCTGCATGTGAGTATTTGCTTGGATG AGGCAAGATGCTGAATAATGCCAGTGCATTCTTTGTCACTTCTAATATTATTATATTCTTGCAAGATACTGAAATGTTTC AGCTCTTCCTAACATTGTGAACTTTGGCTCTTTCTTTTGGGATATAGTGAATCTTTTAAATTTGTCTTCCTCCTTCGCTT TCTGAAGGTGAATTAATTAACTATTCTGATGCATATGATGGTTTTTTCTTTTTCACTTCAAAACATGCAGGAATAATCAG GCTCTTAATCTAAGTGTATTTGTTTTCTGTAATTATTGGTTATATTTTGCCCACAATCTTACTCCCTAAAGAAATAAATA AAAATTTAGCTTTTAATCTAATAATATATTTTCTCTTTCAGAACTATTCCTCTATCTTGTCCCTGCACCCAGAAATTATT GATGGAAGGCCAGGTACACTGGTAATTGAATCTTTTGTGGTGGATGTACCTGAGGGTAACACCAAGGACGAGACCTGCTA CTTCGTTGAAGCCTTAATTAAGTGCAATCTCAAATCACTTGCTGATGTTTCAGAAGGGCTTGCCTTACAAGATCGCACTG AACCAATCGATCAGATATAGGAGCTTA
CDS sequence (LotjaGi1g1v0171900.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAATGGGATTGGTGGGATTGGGAATGGGAATGGTGGATTCAGCAGCTTGGAGATGGAGTATATAAGAAGGCACCATCG GCATCAGCCTGGGGAGAATCAGTGTGCCTCTGCGGTTGTTAAGCATATCAGAGCACCGGTTCCTCAGGTGTGGTCCTTGG TGAGGAGGTTTGATCAGCCACAGAAGTACAAGCCGTTTGTAAGCAGATGCATTGTAAGAGGAAACCTTGAGATTGGGAGT CTGAGAGAAGTTGATGTAAAGTCAGGGCTTCCGGCTACTACAAGTACAGAGAGATTGGAGCTCCTTGATGATGATGAACA TATCCTCAGCATCAGGATTATTGGCGGTGATCATAGACTCAGAAACTATTCCTCTATCTTGTCCCTGCACCCAGAAATTA TTGATGGAAGGCCAGGTACACTGGTAATTGAATCTTTTGTGGTGGATGTACCTGAGGGTAACACCAAGGACGAGACCTGC TACTTCGTTGAAGCCTTAATTAAGTGCAATCTCAAATCACTTGCTGATGTTTCAGAAGGGCTTGCCTTACAAGATCGCAC TGAACCAATCGATCAGATATAG
Protein sequence (LotjaGi1g1v0171900.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MNGIGGIGNGNGGFSSLEMEYIRRHHRHQPGENQCASAVVKHIRAPVPQVWSLVRRFDQPQKYKPFVSRCIVRGNLEIGS LREVDVKSGLPATTSTERLELLDDDEHILSIRIIGGDHRLRNYSSILSLHPEIIDGRPGTLVIESFVVDVPEGNTKDETC YFVEALIKCNLKSLADVSEGLALQDRTEPIDQI
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 13 | 181 | 169 | 1.3E-77 | ||
| PANTHER | 14 | 184 | 171 | 9.5E-108 | – | |
| PANTHER | 14 | 184 | 171 | 9.5E-108 | – | |
| SUPERFAMILY | 37 | 176 | 140 | 2.75E-32 | – | |
| Pfam | 38 | 179 | 142 | 1.7E-19 | ||
| CDD | 39 | 179 | 141 | 3.75972E-35 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi1g1v0171900.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…