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Field | Value |
---|---|
Gene ID | LotjaGi1g1v0184500 |
Transcript ID | LotjaGi1g1v0184500.1 |
Related isoforms 1 | |
Lotus japonicus genome version | Gifu v1.2 |
Description | UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; TAIR: AT4G16710.1 glycosyltransferase family protein 28; Swiss-Prot: sp|Q5I0K7|ALG13_RAT UDP-N-acetylglucosamine transferase subunit ALG13 homolog; TrEMBL-Plants: tr|I3SBY5|I3SBY5_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0184500 |
Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:36144784..36147359) extracted from Lotus japonicus Gifu genome v1.2.
AAGTGTTGTATTGACACAACACAAACACAAATGACACATTTCGCCACAGGAACAACAACATCGAACATAACCAGAAACCA AGTGGCACACACACACGCGGAGAGAGAGGTGCTGGTCTTTGCGTGATTTTGCTGACGCTAGAGAAACCGCATGAAACCCA TTACTTCTTCGATTCTCTTCAATCTAAATTCGTAAGCTTTTCTTCTTCTTTGGAACCGGTGCTTCAATTCATGGGTATTG GTTTTCACCTCTTACTTGCCTTGGCATTTTTTTTCTTTATTGTTACATTCTTGTGATTGAAAATGGGAAAATGGGTTATA TGAGATTGCTGCTAATGTAAATAATAAGTGATCTTCTTTTTTTTCTGTTGATTTGTTGTTGATGATTTTGGATTTGGACC TGTTATTTTGGATCTGCAAGGTAAAGACTTTGAGGTTCTGCTTTTTTCTTGGAGAAAAACAAATTGAGTGGTTGGTCGTG GGTAAATGGAGGATGAGGAAGGGGATCAAAAGACAAGGAGAGTGGTTTTCGTGACTGTAGGGACAACTTGTTTCGATGCT CTTGTGAGAGCAGTGGATTCTCAAAATGTTAAACAAGAGTTGTTTGCCAAAGGGTATACTCATCTTATCATCCAAATGGG CCGTGGATCCTATGTTCCTAATAAGGTATTTTCAAACTGTGTTCACTCTCTCCTTTTGTTTTTAGTTCTTTCTTTGGGAA ATAGATTTTTACATTTGCAAATAATTTTTGCATATTTTCTTAGTACAAATTCATAAATCATAGATATTGATAGAGAGATA GACATAGTTTCTAATGGGAGAGTATGTTTTCATTCTTGTGCTGATATGGGCTATGAAAATTCATGTGAGATTGTTACCTA AAAACATTTGCTAAATGACCTTTCTGGACTTAACTTGATATCATGATTGGTATTTGCCTATTCGGGTCTTTGAGAGATTG AGAAAGAATATGTATGAGGAATCTTGGAGAGATAATTAGGTGATGGTAGCTCATAAGAAGTGACAACTGTGGAAGCTTGC TTTAAGAAAGTTGAGATATAACTGCAGAGCTTTGTACCATGTTAGTTTCAGAAATTGAGCCAAGTCTACCCAATTCTGCC CGAGTTAAGGAAAAAACGATCCTGCATCTGAGTTAACTTGATTTCGCTAAGAAGGAACATTTACTCGTCGAAGTCTAAGA GTTCACTCGCGAGTTTGACAACCATTCTCAGAAGAAGTGACAACTGTGGAAGCTTGCTTGAAGAAAGTTGGCAGATAACA ACAGAGCTTTGTACCATGTTGGTTTCTGAAAAAAGTTTAGTTGTGTTCATTGCGTTGATGATTGGATATTGGATACACAT GAACACATCTATGTAGTAGCACAAGCTTATGTCTAATTAAAGCCAAGTTGATGTTAGTGTGCAGCAAACTCGCCAACAAC TTAACTATTAGATAAAAAAAACTAATATCCGTGCAACCAAGTTCAGAAATGGAGGAAGATATTAGGATCCAAATGCAAGG TATGAGATTGGAAGTATGGGATTCTAATATGGGGTTTATAAGGCCTTGGGCTCTCTAACTACTACAGCTAGCTTTACGGT ATGGTTCTCCAAGATTCTTATCAGAAGATAACTCAATATGGAGAAATTTTTAAAACACTTGGTTGTTTGAATTTAAGGAC ACAATTAACTGCCATGATTTTATTCTATTTGTTGAAAAATTATTGAGAAGTATCATTATCTATAGCAGATACTTTCTTTT TACTGATATTATTGTTCTTTCGTAACTTTTTAATGCAGTCTGAAGGAGATGGTTCATTGGCTGTAGACTACTTCACTTTT TCATCCAGTATTGCTGACCATCTCAGATCTGCTTCTCTTGTCATTAGCCACGCAGGTAGGAAAATTCAAGTGACTTTTGC TCTTGCTGTTTTTGTTATTCGGGGCTTTTGTTATTGAACTCTAGCTATTCTGATTTTATGCAGGGTCAGGTAGCATATTT GAATCATTGCGGCTCGGCAAACCTTTACTTGTAGTTGTAAATGAAGATTTGATGGATAACCATCAAAGTGAGCTTGCAGA AGAACTGGCCAATAGAAAACATCTGTATTGTGCTAGTCCTCAAACAATTCTTCAAACTATTGCAGATATGGATTTAAATT CACTCCTCCCTTACTCTCCAGGTGATGCTACACCAGTGGCCAAGCATATAAATAGATTCCTGGGTTTTCCTGATGATTGA TTCATAATTTTTTTTTTGGCCAAATGTCTCAGAGGGATGATAAGAATTTGTTTGGGTTTATGCTGTATTGGAAATCATCT ATAAGCAAATATATAATATAATGGTTTTGTATTTACCTCTTTGGATGACATAAGAATGAGGATTATGAAAAGGCTATAAT TTCCTTTTTCAAGTGAATGAACAAATTCCGTACATTACCTCAAAAGAGTTTGGCATGAATACATTGGCATTTTCAATTAA ATTTTCTCTTTGGATGTTTTTCATGGCTGCTGTGGCAACCATTATCATAAATAAGTTTTTTTAACACTCTACAATTCGTA GTGGCTTTGCTGCATA
CDS sequence (LotjaGi1g1v0184500.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAGGATGAGGAAGGGGATCAAAAGACAAGGAGAGTGGTTTTCGTGACTGTAGGGACAACTTGTTTCGATGCTCTTGT GAGAGCAGTGGATTCTCAAAATGTTAAACAAGAGTTGTTTGCCAAAGGGTATACTCATCTTATCATCCAAATGGGCCGTG GATCCTATGTTCCTAATAAGTCTGAAGGAGATGGTTCATTGGCTGTAGACTACTTCACTTTTTCATCCAGTATTGCTGAC CATCTCAGATCTGCTTCTCTTGTCATTAGCCACGCAGGGTCAGGTAGCATATTTGAATCATTGCGGCTCGGCAAACCTTT ACTTGTAGTTGTAAATGAAGATTTGATGGATAACCATCAAAGTGAGCTTGCAGAAGAACTGGCCAATAGAAAACATCTGT ATTGTGCTAGTCCTCAAACAATTCTTCAAACTATTGCAGATATGGATTTAAATTCACTCCTCCCTTACTCTCCAGGTGAT GCTACACCAGTGGCCAAGCATATAAATAGATTCCTGGGTTTTCCTGATGATTGA
Protein sequence (LotjaGi1g1v0184500.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MEDEEGDQKTRRVVFVTVGTTCFDALVRAVDSQNVKQELFAKGYTHLIIQMGRGSYVPNKSEGDGSLAVDYFTFSSSIAD HLRSASLVISHAGSGSIFESLRLGKPLLVVVNEDLMDNHQSELAEELANRKHLYCASPQTILQTIADMDLNSLLPYSPGD ATPVAKHINRFLGFPDD
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
---|---|---|---|---|---|---|
PANTHER | 1 | 177 | 177 | 7.3E-91 | – | |
PANTHER | 1 | 177 | 177 | 7.3E-91 | – | |
Gene3D | 8 | 172 | 165 | 3.7E-46 | – | |
Pfam | 13 | 166 | 154 | 3.4E-31 | ||
CDD | 38 | 151 | 114 | 6.24501E-10 | – | |
SUPERFAMILY | 44 | 148 | 105 | 7.22E-10 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
GO term | Namespace | Name | Definition | Relationships |
---|---|---|---|---|
Molecular function | Transferase activity, transferring hexosyl groups | Catalysis of the transfer of a hexosyl group from one compound (donor) to another (acceptor). |
Expression pattern of LotjaGi1g1v0184500.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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