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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0196900 |
| Transcript ID | LotjaGi1g1v0196900.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Plant intracellular ras-group-related LRR protein; TAIR: AT3G11330.1 plant intracellular ras group-related LRR 9; Swiss-Prot: sp|Q8VYG9|PIRL9_ARATH Plant intracellular Ras-group-related LRR protein 9; TrEMBL-Plants: tr|A0A0S3RFK4|A0A0S3RFK4_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0196900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:39849151..39854087) extracted from Lotus japonicus Gifu genome v1.2.
GGTTTTAGTTGCACTAGTGATCCATTAATAGTCCAGTAGCTCTACTCAACCCAGTTTAAAAATAGGGTGTTGTTTTCACA TAGGTCCAGTCCAGTAGTGAGTACACAGAGTCACCACGTTGTCTTTGTTCAAAGATTCTATCGTCAGTGAAGCCAATCCA TTCTCAACTATTTCGACTTTGCAGCTGTGCAGTGCAGTGAAACGAATCGAACAAAGTCACAAACGCAAAAGTTCAAAACG TTATCCTCAACGCAACGCTGCATTGAACCCATCGAATCTATATAGCAACAATCCATCACCATCACCCTCTCAAATCACAC TCCTCTCTCTCATCATGGATCCCAACCCTGGAACCTTTCCGATTCTCTCCTACGTCATGTCCCGCCTCCCTTCCTTCGCA CCCAGGACCACCGCCGCCTCTCCTTCCGATTCCGACCAATTCGACATCGAACAGCCGCCGCCGCCGTCGTCGGAGATCGT CGGCCAAATGCCGCACCTGGCGGACCCGGAGCTCCTGGCCTCTATGGGTCGGGCCATCTCGGACGTCTCGCAGGCTCGCA CCGTCCTCAACCTGATCGGCGAGCGGCCCACCCACGAGGAAGTCGACAACGCGCGGGCAAAGCTGGCGGACATCGACGCC CAGCTCTCCCGTCAGCTAGAAGAGATCGTCCTCCAGTCGAGGCCCACGGAGATCGAGATCCATGGGTGGCGGGCCCACCA GGCCGAGAACGAGAGACAGTGCAGGGAAGCGGCGGAGAAAGAACAGCGCGTTTGGAAATCGGTGTTGCAGCTGGACGAGA TGCACGAGGCGTACGAGAAGCTGCTCAAGGACGCTGAGAACCGGTTGGTGAGAATGTACGAGACTAAGGAAGACGGAGGA GAAGATAATAGGGATCTTGATCTTGATCTTGTTGTAGGGGATGAAGAGGTGCACCAAGAGGTGGTGGGGATTCTGCAGGA GGCAGAGGGGAAGGGAATGGACCGAATCAATCTTTCTGGCCGGAGATTGAAGCACTTGCCGGAGGCATTTGGCCGGATTC ATGGTTTGCTTGTGCTTGACCTTTCAACAAATGAGCTTTCGGTAAAGTCTGTGTTTTTACAGCTTAATTACTATGTGTGT GTGTTGAGATCAACATTCGTTGAATTGCTTTTAAAATAACTAGTTTTGGTAAAGTTGGTTATGTTAAAGTGAGTTCAAAG TGTATACAACTTTGAGAAAAGTGATTTCTATTGTTTTGAAACCCAGCTGTGAAATCTCACTAGTGATTAGGTTCCAAGTT AGGTTTTGTAGCTTCATCCCATAATTGAAACATCTATACACCCAGAAAATGATTTTGACAGCCAAGAATCAATACTGATA TTAATATACGATCGCATCCAAGCACCCTTTAAGTTTCTGCTGGACAAGTAATTCTGGGAGAAGTTTGTAGGGGCAAAGTG ATTATGGGTTTAACTGTGTATTCAAACCTGATTCAAATGGGGCAGAGCAGGGTTGTCGGGTACCTGTTGCAATGCTCAAG TTAGTGAGTGGACTAGTAGAATGACAATAGAGTAACTAAAGGCATTTGAAAACGATATAATATGGTGGCAGACTTGTGAT TTAAACTGAAAACAGAAAATGAAAAATAAACCAAACAGGCTCTAAGGGTACCTGATGGACTATATCTTATTTATGGGCTT CAATGGTGCATTGTTGCTGCTCTAATTTAGCATCATATAAAAAACTGTCTATAATACATGTCAGGGCATAAACCTTTGTT GATTTCGTACTGGTGCCCCACGACGTTACGTGTGAGATGACTGACTATATTGAGATATTTGGGATCTAGAAGGTTCAAGT TGAAAGGGCAACGGAATCTCAACCCACATCAAAGGGGTTGGCCCGTGGATGGACTTTGAGTCAATTCCTAGAATGCTGGC CTATTAGTCTGGACTTTGTTAGTATTTCCAACTTCAAAGGTATACATGTTAGGCAAGAAGGAATCCTTTCATGATACAAA TATTCTTGTCCTGAAAAAAGAAATTGGTATTAAGTTTCGTTTTATATATTATTATAAATTCTGATTGAGTCCAAGTATGA TGGCATATTTTTTCACGTGAGGTAAGGTGAAATTTTAACTGTTAGTGGTTCTATTTCCTGTCTAATGCACAATAGAAATA GGTTTCTTTTAGATGACACTTATCGAGTTATCTACCTATCAGTTATGAAATGAATTGAGCTTGTTTTGGATTTTGAACGT CTAATGCATGTCTCTGTTTGTGTTTTGACAAGCACAGTAATGGAAAGGATAAAATCAGCTATTGTGCTTAAACCTTAATT ATTGCTCCCCTGGTTAATACAGTATCAGTTTGTATACGAGAATTTTCATCGGTGTGCAAATATCAGCTTTCATTTTGAAT ATTTATGCTTCTTGGTGCTCTATTTAAAATCATGTTGGTGGTACTATTTTCTTAGTTCATATAGCCTTTCTTACATGTAT ATGTTATATTCCGTCCTACACAATAGGCAATTCCTGACTCAATAGCTGGATTGCAAAATCTCGAGGAGCTTAATCTTTCT TCAAATCTTTTGGAATCACTGCCCGATTCAATTGGGTTGTTACAGAAGTTGAAATCGCTCAATGTTTCTGGAAACAAGCT GACTGCCCTTCCTGATTCCATCTCTCACTGCAGGTACAGAGTAATTCTTATGAGCTATATTTTTTGTTATTGTCATTGTC ACCAGTTCGAGTTATATTAGTATACCTTGTAGTTTGGAATGCCTAGAAATTTATTGCGGACCCTAATATCCATGCGTTTT AAGAAATAATGGTGGACTTAAATGGAGAGCCTCATACGAGTAATTTGAAAGCTGTGTTGTAAAAAATACCAGACTACTGA AAATGGAAGCCACTTTTACAATGCATGATGAAAATGTTTTTCATTCAAATTTGTCAAACTTTAACTATTGCATTAACATT ATGTTTCGTCCTCTTATTTGTGCTTTTGAGCCTTTCAGAAAGGCTAAATGTCCAAGCATGGTAAAGCATCTCACTAACAG TTGTATGTTCTGTTTCTGCAAATTTTTAAAATCACTGTTGACGGCAGGACAAAAATACTCAAATCGTTTTAGGACCTTCT TCAAACTTTGAATGTTTCATTTATTATTGATTGAATCCCTTTTATATTGAATGGTCAGGTCATTGGTGGAGTTGGATGTA AGCTTTAACAGTCTGTCATATTTGCCAACAAACATTGGATATGAGTTGCCAAATTTACAGAAACTCATGATTCAATTGAA CAAAATCCGCTCTCTTCCCTCGTCTGTTTGTGAGTTGAAGTCCTTACGCCATTTGGATGCTCACTTCAATGAGCTTCATG GGCTTCCAATGGCAATTGGGAAACTGACTAATCTGGAAGTTCTCAACCTGAGCAGTAACTTCACTGACCTTAAAGAACTT CCAGAGACATTTGGTGATTTGACCAACCTCAGGGAATTGGATCTTAGCAACAATCAGATTCAAGCACTTCCCGATACATT TGGCCGCCTTGATAATTTGACGAAGCTAAACTTGGAGCAGAATCCTCTTGAATTGCCACCAATGGAGATTGTAAATCAAG GGGTCCAAGCCATAAAGACTCATATGGCCAAGAGGTGGATTGACATATTGCTGGAGGAAGAAAGGAAAAGCAATCAAGAA ATGCAAGAACAAGGAGAGGGTGGCTGGTTAACACGAAGCACCTCCTGGTTGAAGAATGTTTCTGGAAATGTAATTGGATA TATTGGAGCTGTTGGGTCTCCCATGTCACCCAAATCTCCCAGAGATGCATTCCTTGATCAGCAACTATGAGGTGATGATC AGCAATTAAAATTACTATATCTGCTGCTAAGAAACAAATTCCTAAGACTGAGGTCTGAGAGATGCTTTACTAGCTGATAT CTTTGATTTGCTTGAAGCTTTGGATAAGTCTTGCTGTGTTTTCAAGCAAAGCTGGTGTTTTAAAAACCAATTCAACCGAG GTTGAGGTCATAAATACTTATAAAATTAAATAAGGTAAATCCTTCAATCTCTACGGAATTGATAGATACAGTGGTTGAAT CATGATTAGGAAGGATGCAATGCCTAAACATTATGGTTTATTTTCCATGGTAATCATGGTATTACGGAAACAAGTGACAA AACAAGCTACTAAAATGTAGTGAGTTCTGAATGTAAATATACTCGTGTTCTATCATTAACAGGAAATTTTACTTGCTGCT TTTGTTACATGTTGTCCCTTCACCTGCTTTAAAAAGACTTCTCTTAGCTTCCACAAAAGGTCGTAACCATCTTGCCTTTT CCTTTCCTGTTGTTCATGGTGATATAAAAGATTTAGAACATGACAGGCTTCTGGTAAAGAAGTAAGCACAAATAGAATCA CATAGAATAAGAGACTTATACTTTGTTTGTAGGAGGGGAAATGAAGTAGATAGAAAGAGTTAGAATAGGAGATAATGGGT AGGTTTTTTTGTTTTTTGGATTAATAAAATAGAATAAAAGTAGCTCATAAAAAAAAGTTAAGGTGTACGCCTATATTCAC TTCTTTATGTTTCTCACAATCTTTTATCAATCTTTGCTTTTCTTCCTCCTTTTTGCTCTCATCAAATTTTGATCTTTGCA AACCTCATTAGTGGAAAGAGGCATAAGACAAACCTTTTTGTCCTTGAACACTTTAGAGTATGTGTTTGCCTTGCTGTCCT CATGACTAACTTGGCGATCAAATTGCCAAGGTCTCCCAAATAATACACGGTAAGCCTCCATAGGCAGTTAGGCACCACAT CACATAAGCCTTCATCATGATATTTTCCTATTGACAAAGACGTGCTTGTTGACAACCAACCCCCCACGATTTTGAAGCCA TTGAAGCTTTTATGACTTTGGATGAAGGGTAGTGGGGAGACTAAGCTTGTTAACTAG
CDS sequence (LotjaGi1g1v0196900.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGATCCCAACCCTGGAACCTTTCCGATTCTCTCCTACGTCATGTCCCGCCTCCCTTCCTTCGCACCCAGGACCACCGC CGCCTCTCCTTCCGATTCCGACCAATTCGACATCGAACAGCCGCCGCCGCCGTCGTCGGAGATCGTCGGCCAAATGCCGC ACCTGGCGGACCCGGAGCTCCTGGCCTCTATGGGTCGGGCCATCTCGGACGTCTCGCAGGCTCGCACCGTCCTCAACCTG ATCGGCGAGCGGCCCACCCACGAGGAAGTCGACAACGCGCGGGCAAAGCTGGCGGACATCGACGCCCAGCTCTCCCGTCA GCTAGAAGAGATCGTCCTCCAGTCGAGGCCCACGGAGATCGAGATCCATGGGTGGCGGGCCCACCAGGCCGAGAACGAGA GACAGTGCAGGGAAGCGGCGGAGAAAGAACAGCGCGTTTGGAAATCGGTGTTGCAGCTGGACGAGATGCACGAGGCGTAC GAGAAGCTGCTCAAGGACGCTGAGAACCGGTTGGTGAGAATGTACGAGACTAAGGAAGACGGAGGAGAAGATAATAGGGA TCTTGATCTTGATCTTGTTGTAGGGGATGAAGAGGTGCACCAAGAGGTGGTGGGGATTCTGCAGGAGGCAGAGGGGAAGG GAATGGACCGAATCAATCTTTCTGGCCGGAGATTGAAGCACTTGCCGGAGGCATTTGGCCGGATTCATGGTTTGCTTGTG CTTGACCTTTCAACAAATGAGCTTTCGGTAAAGTCTGTGTTTTTACAGCTTAATTACTATGTGTGTGTGTTGAGATCAAC ATTCGTTGAATTGCTTTTAAAATAA
Protein sequence (LotjaGi1g1v0196900.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MDPNPGTFPILSYVMSRLPSFAPRTTAASPSDSDQFDIEQPPPPSSEIVGQMPHLADPELLASMGRAISDVSQARTVLNL IGERPTHEEVDNARAKLADIDAQLSRQLEEIVLQSRPTEIEIHGWRAHQAENERQCREAAEKEQRVWKSVLQLDEMHEAY EKLLKDAENRLVRMYETKEDGGEDNRDLDLDLVVGDEEVHQEVVGILQEAEGKGMDRINLSGRRLKHLPEAFGRIHGLLV LDLSTNELSVKSVFLQLNYYVCVLRSTFVELLLK
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 24 | 47 | 24 | - | – | |
| PANTHER | 24 | 249 | 226 | 1.9E-58 | – | |
| MobiDBLite | 24 | 40 | 17 | - | – | |
| PANTHER | 24 | 249 | 226 | 1.9E-58 | – | |
| Coils | 90 | 110 | 21 | - | – | |
| Coils | 150 | 177 | 28 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi1g1v0196900.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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