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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0210000 |
| Transcript ID | LotjaGi1g1v0210000.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Movement protein binding protein 2C, putative isoform 1; TAIR: AT5G08120.1 movement protein binding protein 2C; Swiss-Prot: sp|P02469|LAMB1_MOUSE Laminin subunit beta-1; TrEMBL-Plants: tr|A0A0B2QAV2|A0A0B2QAV2_GLYSO Uncharacterized protein; Found in the gene: LotjaGi1g1v0210000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:45944761..45948985) extracted from Lotus japonicus Gifu genome v1.2.
CTTAGAGCAGTTATATTTCAAGCCCAGTCTTTCCCTCCCTCGTTTCTCGCCTTCCAGTCCTGCTTTGTTTGCGATGAGAA GCAGCGTTTGGAAGGAAAAATGGATTTGAACACTTGTCTTTCTTCCGAGCGAGACCTAGACAACTCGTCCTTCAAATTCG ATCGTGTCCTCTTCGATGACCTCGTCCAGATTGTGCCTCTTGTTCACTCCCTCACTACTGTATGTAATCTCTCTCACTCC CTCGCCTTCAATTTCGCATCTCCATTTTTTAACAAAACCAACCACATACTTTTGAATCATACACGCTCAGAGATTATAAT ACATTCATGCAAAATGCTAATGCTAGTAAGTTTTTTGGTTCAATGAGGGATCAAAACAATTTTAATTCTTTTGGATGGAT TTCTAGTTCAAATTTTTAAGCAATTTTGATTTAGTTTTCTTGAAATTTGATTAGGATAAGAAAGCAAGCAGTTCGTTTGC GCGTCGAGGTTCGATGATCTACACTAAGGCACCTTCAAAAGAGTCGTGGTTGGAAAGAGTAAAGACTCTTGTTCCCTCCC TTTGATTTGAATTTTGTTCACTTATCCTTTTCATTCTTGTTAAGTTTGTTATGATTGTCATCAATATAATATGGCTTTGT TTTGAATCGTCGGAGCATTTATATGCGGATGAGTAATGTTTCGTCTCTGGGTGTCTGGACACCCAAATAATAATGAGAGA GAAAGGAAGAGAAGATAAATAAGTAATTGATATGATATATAATGATTGTGATATGAAGAGAGATAAAGAAGCAAATTGAG TACGGGGTGTTGTTACCAGGGTTGTCGAATAGCGCATAGGGCGCGCTGTGAGGGCTGACTGCTATATGCTATTTGTCCAA TGTTAATTAAGTATAATCTTTTGGATAACGTTACCAGATTTTTGGACTAATCTTGTAGTTACTTTTAATATGTTATTACT TTGGTTTTCATAATTTTTCCTGCTCATGCCATCTGCAATTTTTTTTTTGAGAAGACTTCTAAGTTTCTAACTCGGTAAAA CATAGAATATCACATATCCTTAAATTGATATCACATATCCTTCAAGGACCAAACTCAATCCAATCTTTCCTGTTATTTAA AGACTAATTGATACCACTTAGCTTAGTAAAACATACCAATAGAACACATCCTATACTAGCAAAGAGATCACTAACCTGGT GCAGCAATCACCACTGAAATAGTAGCCAGCAAATGGCTTGAAATATGTTGTTCTACTATGATAGGCTGAAGTAACAACAA AATTTCTAAGTGATGAAGGTATAGTGAAATAGTAGCAAGGAGATCAAACAAATTCAGTGAATTTAGGGAATTAAAAATTG CAACTTAACCATCAAGAATTATATGGATACCACCAAATTTTGACTGCAAACCAATTTCTTGACCTGCCAGACATGAGGTT TCTGAGCTATATCTAAAATCCAACCACAGCCAACTTTCCCTGCCACATGAAAATTGAAACATCTCTCTATCACTTTAGGT GCTAATGCTATTGCACACTAACAAATTTTTTAAAAGCCACAAAGCATAAGCTACATATGGATGAAGCCTGAAATAACAGT ATATAATGAAGATATAAGTGAGCCAAAAAATCATTAACAACCATCATGAAAACAGGCAAGCATACCTTTAGCACTACAAC ACCACCAGAAATCTTGGCTGTGGAAAACATAATGCTTTACCACTCTCACTACTCATAAGAGTGCTAACACTGTACTCTGT ACTTGGAGAATAATCAGTGACTTAGTGCTCTTAATTATAAATGATTAGAATAAGAGATATGAAAATTAACTATGAAAAGA AGGAGATAGCTCATTCTAAGAAAATGGCAGTAAATTCTACCTACAAAAATTGAAAACATACCTAATAATGATTTGAATCT AGCAGTGCTGAAAATACTTGGAAGATATGGAGAGATCTTTCAATACAGAAAATGAAAACTTAACAACAAAATATACCAAC TCATTTAAGAACAAAATATAACAGCATCTCATTATTTATGAACGAAGAAATTCAGATTGTTTATGTACAAATTTTTTAAA AGCCACAAAGCATATGCTATGCTTAGAGCATCACATTACAATTCACAACTGATATTCCTTTGTCACTATCATCAATCATC ATATTAAATATTTTTCATCCCCTTCTAGATGAAATATTTAAAAGTCAGGAGCATAGGTCAATCTTTTCCTGCTAAAAAGA AAAAAGATCATGGAGAAAAAGGACAAATAAAAGAAGAGTACTTCTTAGTGAAAGAACAGGTGGAGGAACTGCAGATGAAG TTATTGGAGAAAGATGAACTTTTAAAGTCAGCAGAAAACTCAAGAAATCAGATGAGTTCTGTTAATGAGAAACTTGATGA ACTGAAACACCAGGCTGCACAAAAGGACTCTTTGCTGAAGTCTACACAACAACAACTCTTTGATGTGAAGGTACTGGTCT ATTTATATTCTTTGATTTATAATTTGGCAAAATTAGTTGCAAAGTTTTTTAGACTGTGATGAGGGTTCATACTTCATACC TTATGCTATTCATGAAGATTTTCACTTAATGCATCCACTTCACATCTCTTGAACATGACAACCATAACTGCGGTGATGAG TGCTGAAAATTGGATCCAAAAGTAGTTTTTGGCATATGGCCAAAACAAAATGCAAAGTCTAGTTTTTTTGGGTTCCAGCT TCTCAATGGCGTAGAATCAGTCTCTTGGAAAAATGCAAGGTAAGGCTGCCTAGAGTAGATCCACAAAGTGGGTTCGACCC CTCCCAAGAGCTTGTGCATTGATGGAGCTTTATAGTATCACGTTTGCCCTTGTATTTTAACTAGTATACCAAATGTCATC TAAAATTTTTATGGATTTATTAGGCATATGAACATGGGAAGGTTTCACAGTTTTCCTTTTTTCCATTCTACTGTACCATT CTCATATAAGTATTGTTTAGAATTTGGACTGTGTCACCACTGAAATTGTTAGTGAAAGTCCATTTCGGATTTTGTGAAAC CTTAATCCTGTGAGATCAAAAATTCAAAGTGCATCAAAATTCAAAACTGTGATATTATAAGGGAAGCAAAATGCTCATTT GGAGCATTGTTTTGAAATTTCTTGACAGTTCTTACACAACAGGTATCGTTTTCCACAGATGATGCTTGCAGACAATCAAG CTGCTCTTGAAAAGATACAGTGGGAATCAATGATATCCAACAAGAAAGCAGAGAAACTTCAAGAAGAGATAGGTTCCATG CAAGGAGATCTTTCATCATTTACATTGCTACTTGAAGGCCTGACAATAACAGACAATGCTGAATACATTGATGATTATGA TATTAAGCCTTATGTTCACTCCAATCACCTTCCTAGCATTGTGAGTTGATTCATACTTCTCTGACCAGTACGCGCTGCAT TTGTTTTGCAAATTTCTGTATATGCTGTCATGATTGCAACAAAATACTAATTTTGATCATCTTCTTGGTAACAAGATAGA TTTATCTCTTGTCAACCAATATGTACATCTTGCAGTAATGCAACCATGCATACATAATGGAAGATTTGTGTGTATTTTTT CCTGAGAAGCACGTAATGGGTGCAATATTAGGACTTAACAGATTACACAATTCTGTCGGGGTAAAATTAGTATATACAGT ATACAGTGGCATTTTATTAGACTACACATTTGTATAATTTCTGAGTACCATTATTATTCAAAACAGTCTTGTGTGTATCC GCAATTATAAAATACTTTATGTTTATTTTCAGAATAGTAAACTTTTCTGTTTTGTTCAATAGGATGATTTGGACGAGATG GAAATGCATAAAATCGAAGAAGCAAGAAAAGCTTATAATGTTGCTGTTGCTTATGCGAAAGAAAAACAGGATCAAGAATC TATTGCTGCTGCTGCCAATGCTAGGTTACATCTTCAATCAATTCTTTTCAAACCCAAAATTTCCTCTTTGTAGTTTTACT TGTGTTGCCTATAAATTGTTTACTGTTACACTCTACGCCTCTACACATGCTTGTTGTTTGACATGAGCAAACATATAAAT TCACAGAGCCACTAATTTTTCACTCTCTTTGGTTCTATTCTCTCATTTTATTTGCTCTCGTATACCTTTTGTAACCAAAC TTCGATATGTGTTGGCATTTCATCAACCAACAGTTGTAACTCTCAATTTACCCTTTAAAGTGCAC
CDS sequence (LotjaGi1g1v0210000.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGATTTGAACACTTGTCTTTCTTCCGAGCGAGACCTAGACAACTCGTCCTTCAAATTCGATCGTGTCCTCTTCGATGA CCTCGTCCAGATTGTGCCTCTTGTTCACTCCCTCACTACTGATAAGAAAGCAAGCAGTTCGTTTGCGCGTCGAGGTTCGA TGATCTACACTAAGGCACCTTCAAAAGAGTCGTGGTTGGAAAGAATGAAATATTTAAAAGTCAGGAGCATAGGTCAATCT TTTCCTGCTAAAAAGAAAAAAGATCATGGAGAAAAAGGACAAATAAAAGAAGAGTACTTCTTAGTGAAAGAACAGGTGGA GGAACTGCAGATGAAGTTATTGGAGAAAGATGAACTTTTAAAGTCAGCAGAAAACTCAAGAAATCAGATGAGTTCTGTTA ATGAGAAACTTGATGAACTGAAACACCAGGCTGCACAAAAGGACTCTTTGCTGAAGTCTACACAACAACAACTCTTTGAT GTGAAGATGATGCTTGCAGACAATCAAGCTGCTCTTGAAAAGATACAGTGGGAATCAATGATATCCAACAAGAAAGCAGA GAAACTTCAAGAAGAGATAGGTTCCATGCAAGGAGATCTTTCATCATTTACATTGCTACTTGAAGGCCTGACAATAACAG ACAATGCTGAATACATTGATGATTATGATATTAAGCCTTATGTTCACTCCAATCACCTTCCTAGCATTGATGATTTGGAC GAGATGGAAATGCATAAAATCGAAGAAGCAAGAAAAGCTTATAATGTTGCTGTTGCTTATGCGAAAGAAAAACAGGATCA AGAATCTATTGCTGCTGCTGCCAATGCTAGGTTACATCTTCAATCAATTCTTTTCAAACCCAAAATTTCCTCTTTGTAG
Protein sequence (LotjaGi1g1v0210000.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MDLNTCLSSERDLDNSSFKFDRVLFDDLVQIVPLVHSLTTDKKASSSFARRGSMIYTKAPSKESWLERMKYLKVRSIGQS FPAKKKKDHGEKGQIKEEYFLVKEQVEELQMKLLEKDELLKSAENSRNQMSSVNEKLDELKHQAAQKDSLLKSTQQQLFD VKMMLADNQAALEKIQWESMISNKKAEKLQEEIGSMQGDLSSFTLLLEGLTITDNAEYIDDYDIKPYVHSNHLPSIDDLD EMEMHKIEEARKAYNVAVAYAKEKQDQESIAAAANARLHLQSILFKPKISSL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 15 | 96 | 82 | 3.2E-101 | – | |
| PANTHER | 15 | 96 | 82 | 3.2E-101 | ||
| PANTHER | 95 | 286 | 192 | 3.2E-101 | – | |
| PANTHER | 95 | 286 | 192 | 3.2E-101 | ||
| Coils | 106 | 157 | 52 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Microtubule binding | Interacting selectively and non-covalently with microtubules, filaments composed of tubulin monomers. | ||
| Biological process | Plasmodesmata-mediated intercellular transport | The movement of substances between cells via plasmodesmata. Plasmodesmata is a fine cytoplasmic channel, found in all higher plants, that connects the cytoplasm of one cell to that of an adjacent cell. |
Expression pattern of LotjaGi1g1v0210000.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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