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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0210500 |
| Transcript ID | LotjaGi1g1v0210500.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | MADS box transcription factor; TAIR: AT5G60910.1 AGAMOUS-like 8; Swiss-Prot: sp|Q42429|AGL8_SOLTU Agamous-like MADS-box protein AGL8 homolog; TrEMBL-Plants: tr|V7B1N1|V7B1N1_PHAVU Uncharacterized protein; Found in the gene: LotjaGi1g1v0210500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:46049000..46059720) extracted from Lotus japonicus Gifu genome v1.2.
GGAGAATTCATCACAGTCATGTAATTCGTATGCTCTGGTTCGTTCTAACGTTCTAGAACGATCTAGGTAGCATAGAAATT ACAAGGCTCCTCCATGTATATAGTAATGATCAAGAGAAAGAAAAATATATGCTGAGTGAGTATAAATGTATAATAGATAT CTAAAAAGGGAAATTGAAGGGTTCATTGGATAAAAAGTGTGTGAATATGGGAAGGGGAAGGGTGCAGTTGAAGAAGATCG AGAACATGGTCAACAGGCAAGTGACGTTCTCAAAGAGAAGGTCTGGTTTGCTTAAGAAAGCTCATGAGATCTCAGTGCTT TGTGATGCTGAAGTGGCTCTCATAGTCTTCTCCAGCAAAGGAAAGCTCTATGAATACTCCAGCGATCCCTGGTACTTAAT TATTCACTACTTCATCTTAATTTCTTTGTATATGATTTTCTCATCTATATATGAGATCTGATCGATAATTATATCAATTA TAAATATCAAGGGTTATGATAATCACATCATGATAATATTTTGCAATTGTTAAAGTGTGCATACCCAATATGAATGATCG ATGCATGCATCCACAATTTTGTAGTAGAAACCTTCAAAACCGTGATGCAGCAGTTGTAATTACACACTGCAATTTAAATT ATTGATTTATATATTTATGCCTGCCATTTCTCCAGTTTTCCCTCTTGAACTCTACTGTGCTAGTTTCACTTTTCCCTTAA TTTGCTATGTCTTTGATGCACCTGGATACTCAATTCTTGACTTGTCATTATGATTTTTTATTATTTTTTCGGTGTTGGTA CTTGCCATTATGATTGAAGTTTGCAACCTTTTTTTTTTTGATATTGAAAGTTTGCAATCTTCATACATACATATCATTGC CCTCTCATATATTTAACTTATATTTCTTTAACTAAACTCGATTGATGTTAAACTTCACTCATTTACGGTGTGTTTGGTTT GAGGGGGAGGGAAAGAAAATATTGGTAGTGGAAAGAAAACACAAACTCCAATGCACCTTCCCCTGTATGGTTTGGAAAGA AAGTTGAGGGAAAGAATGTTTTTTAGTGGGTCCCCCCAAGAAAAACCTTCTGCCCAAAACTGGAAAGAAAAGAGTGGAAT GACTAGATTTTGTGTAAATGACCATTGTGTCCCTATTTCTTTTGATTATTCACTTATCTCCTTATGTTTTTTTCTCCGTT AATTTTTTTTGGTTAACTTCTACTTTGTATACCTAAAATCTAAAATGATACTTGCCTTTACCTTTCTATTAGATTTTAAA AATTGTGAATATTTTTAATTCAAAAACATATTTTAAAATGAGATTTGTACTTTATTTGTTAAAAATAAATGTAAATGGTA GAATAGTAATTTGACACAAACTTCTTTTATTTCCTTCCACTTTTTCTTTCACACCAAACAACTTAAATAATCCTCTCCCT TTCCTTTCCCCTTCTTTCCTTTCTCTTTCTTTCCTTCCACTGTTCTTTTCTCTCCCTTTCTTCTCTAACCAAACAGACCC TTAGGATCCCAAGAGAGAGTCAAAGGATAATTTAGCTAGCTAGGCCATGAGCCTAATAATAATGATATGAAGAGAGTAAA CAACCATTTTGGTCCTTGATTGTGTTCACTTGTGACGGATTGGTCCTTATATTTTGAAAATGATCGATTTTCATCCTTGA ATGTGTTACCGTCGGTCAAGTTGGTCCTTGGTTGTGTTTTCCGTTGGTCCCTCTAACGGAAAAGTCCAAATGGCTTTTTT TATTTTCCATGTAAACGTCCTACGTGGCACGTTTTCATTTTGCCTCCAAAATACAATGTCAAACTAGTCCTTCATTGAAT CATTGGTACCAAAATAGTCCCTCAAGCTTCCCCACTCTCTCTCTCTCTTTCCTCCAACTCTTGTTCATCATCATCATGTT CATCTTCTTCTCCAGACTTCATCATCATCAATTCACTATCTTCTTCTTCTTCTTCTTCATTTCAATCACGCCCCTTGCCT CTCATGTTCTCCTTCACCCTCTGTTTCATTCTTCTCCCTTCACCCTATGTGCAGCCCACCACAAACAGAAACAAGGAAAT CTTCAATACAACATAACCACAGATTCAATCCCACAGCACAAAAACACTTCATTCAAACAGACAAAACACGAAAAATCCAC AGAGCAGAACCACAAACTCCAAAACCAGTAAGCAAAACATGCACACCCACAAAGGGATCCCGTTAGTTATTCAATTTTGA ACCTGTAATCAGCAATTTTCAACTTCCTTCAATTCCAAAATCGGTGATATATTAGAAATTATACCATTCCAATTTTCCAA TCTAATTCATTCAAATTTAAACCAGTAATCATAGATTTTCAAGTTCCTTGAATTCAAAAATCACAGTTACTGTAAAGATT CCTTTATTTCAATCTAATTCAGAAAATAATCTAACCTAGCAATTCATTCAATTTCAAACAAGTCATCCGCAATCCTCCAA CTCGAAAATCGCTAATACCTTTTAAGATTCGATTATTCCAATCTAATCTAACATATAATCGCAAACCTCAGTAATCAACG ATTTACAAATTCCTTCAATTAAAAAATCGCAATCACCCTAGAGATTCCATAATTATTCTAATCTAAATCAGCAAATCAAG AGTGCGTGTACACACAGACACAAATACAGAGAGAAACATGTTAAAATCGCGAATCTAACGAGCAAAAGTGAATAGATCTG GAAACCCGAACGGATTTGTAGGCGGCAAGGGTGCTCTCAGCGGCGTCTTTCCTCTCACCGCCGGTCTTGAACTCAGCCAC ATACCTGTGGTAATCGCCCTTCATCTTAAGGTAGAAGACCTTAGTGTCACCGGAAGCGGCGGCAGGGATGAGGCGGGAGT CGAGAAGCTTGAGGATCCCGTCACAGATGTTGGAAAGCTCAGACTCGATCTTGGATCGGTAGTCACGGTTGATGGAGACG TGATCCTCGTTGTCGCGGCTCTCCTCCTTCTGCTCGATGGAGGAGATGATACGCCAGGAAGCACGGCGAGCGCCGATGAC GTTCTTGTAGGCAACAGAGAGGATGAACGTAGGGTGAAGGGAGAAGAATGAAACAGAGGGTGAAGGAGAACATGAGAGGC AAGGGGCGTGATTGAAATGAAGAAGAAGAAGAAGAAGAAGATAGTGAATTGATGATGATGAAGTCTGGAGAAGAACAAGA GTTGGAGGAAAGAGAGAGAGATAGTGGGGAAGCTTGAGGGACTATTTTGGTACCAATGATTCAATGAAGGACTAGTTTGA CATTGTATTTTGGCGGCAAAATGAAAACGTGCCACGTAGGACGTTTACATGGAAAATAAGAAAGCCATTTGGACTTTTCC GTTAGAGGGACCAACGGAAAACACAACCAAGGACCAACTTGACCGACGGTAACACATTCAAGGATGAAAATCGACCATTT TCAAAATATAAGGACCAGTCCGTCACAAGTGAACACAATCAAGGACCAAAATGGCTGTTTACTCGTATACATATATGCCC CCAGTCCCAGGTGGTGATCTGAGCATGACCATATAAAACGTACGTGATTTGCTATTTGAAGGAAGCAGCAGCTGATTTGA CACGCTCAGCACCAGGCACGAATACGAGAAAGAATCAGAAAAAGTGACCAATCACTGTGACAATACAGTAGTGTCACCTA TAAATGCCAATTCAATTACAAAAGCCACTAGCCTATCAGACCCTTCGTTAGTGAATAACAGCTTCATTGACACCTTATAC AAGTAGAATAATAAGTAGAATAGAGGTGGAAATAGGAGAGATATATAAAGAAAAAAAATGATAAAATATAAATTTGATAG GTGATATGATTGATAAAGATAAAAAAATATATAGAAAAAAAATAGAGATAAAAAAGAAGCGGAAAAAATATTATGTGTGA AATAGCTCCTACCAATCAAAGCCAAAATGACACTGAGCCACTGAGGAAGTTACTACTGTTGAATAAATTGGGGGGGGGGA ATTGAAGAGGTGAGCTAAGGGAAATAAAGGGATTGCAAGGTGAAGGGTAAATGTTCAAATCTTGGTGAATGAACTAATAT TTTTTTTTGTTACAAGAGGAAAATTAACAATAAAGAGAAACTACCTAATTGCATCTAAATACAGTGATGCATAAACAAAA GAAGGGGGGTCATTCCACTGTTGAAATGGCGTCCCGATCCTACAGGCTTCCCGAGCTAGAGCATCCGCTGAATTATTCTT GTCCCGCGCAATGTGAACCAAATTGATCTCCTCAAAGGCTACCATCAGCTGTCGAACACGCTGGATCTCTTCACGGTTCC AGAAGTTTGCAATATCATTCCCAGCTTGCAGAAGGGTGACAAGTTCAGCACAATCTGACCAACAAACCAGCTTCCTTAAT CCCCTCTTTACTGCAAGCTTCAGGCCCAATTCTAGCGCCAAAACATCTGCCAGGAAAGGACCAGCCTGATTAAAACTATG AGAAATACCAGTTACCCATCTGCCATGCCCATCTCGAACCACAGCTGCACACCCCATCCTTCCAGTGTGAGGATTCCAGC TGCCATCGACTGAAACGCAAGGTGTTTCCGCCGTTGCACTCGTTATCCCGTGTTCATAAACTGCTGAGGTATGCAGCGGT AGCTGCCATGATTCACACCATAGAGTATCATCTCTAAGAATGCATCACAAAGTTCGTGTTTTACCCATACCCAACCTCAT ACCCACCTAGTGGGTTTTTTTTACGTACCCTGGCCATTGTGGATATTTTTAGCGGGTATCCAATGGGTCCAAGACCCATT GCCATCCCTACTCTCGAAAGTTCGTGTTTCTCACTCAAGATCATTGTATCAAAAATACCTTTAGGTAATTAACGACTCCT TGAGAAATAGTTGCATCCAAGCAAGGGTGTCATCTTAACTCTTGTGGACAATCATGCCTCAAGCATCATTCATCATAAGC AACCAATCATACAATCATGGAAACACAATTGTATATCTGAAAACGGAAATTACCCTCACCTGGCCTTAGGCGTTTTCCTT CAAGTCACGACTCTGATCCGGTCACATCTTAACTCCTCGCACCAACTCCCTTTCCTTCTTCTTTTAGCTCTGGCACAAGC AAGCTCTCGCTCATCGAATCCTTCAATATAAGTATTTAATATTGTCACTCTTCACAACTTAAACTATGACCGAGCTAGGG TTTAAGGTATGCTTCTAAGGGTCCTCATCCAAACATGCATCAATATCACATAGGAAAGTACACAATCAAGACCTTTCCAA AACTCTCTTTACCATAAAACACATGCAAATCATTTTCACTTCCAAAGGTTCATGACCTCAAAATGCAACTCAACAAGCTA GCCTTTTACTAACTCTTCAACTTGGAACACTTGAGATAAAAGCATGAATATATTTCATATAAAATCTCTTCAAGTAAGCT TTCCAGCAAAGTAAACCTTATGAAATTTGAACACTTGTTGATTGATTTAAAAATCAAACACTAGAGCTATCTAAGAGTGA AAACAACAAAATTAAGGGAATCTTGTAGGAAAAACTAGTACTAACACATCCAAAAATTATGAAGATTTTACCACGTGAAG CTTTCATACAAAATTGGTTTAGCCTAATTTGGACTTCTAAAATGAGAGTTATGCATGCGCTCTACAACACAGATTGTAAA GGTGTACCCGACCAGAAATAGAGTTCAACTTCAAGCAACTACTGAGATCAGCCCAGACCTCTAAACATCACACCTTTCAC ACACAAGGTAGGGCTTCAAGTTAATTTTCATTTAAAATTAGTTTCACTCGATTTGAATCATAATAGAAAGAGTTATGTCA TATAGACCACACGCTACTCTACTAAAACAGTTTTACAAACTTTAAGAAAACCCTCAAAACAAAGCCTTTTTCTTAGAAAT TCAAAACCCAATTTTCCCCATTCACAAATCTACTTCTGAAGCACGAAATTAAGTTCTTCAAAAGGGAATTTCAAGCCAAA AACCCAATGCATGCACTCGGCCCCTCAAAGTTCCCCGTCAACCAAAGTTTTTCTTTCAATACCATCTTCATCAGATCTGA CTTAAATCGCCACTCATATTCTCCTACATCTTCTCAAAGTCAACAGAAGAGTCAAGTAAGTGAGGGCCAGAAACGGCGAC AATGTTCTTGACCTAGGTATGATTAGGACAAGACACCCTAAAAGAGCATAAAAGTAGGAAATAAGTCAGAAAATAAAGCT GTCATATCATAAAATGAGAAAAAATACCTTTTGTACAACAAATTACCTCCTTTTTATAGTGGGGGATGGTTTGAAGACCT AATATGTGTAGTCTATTGGGCCTTATAAATCCATGGCCCAATGGTCCTTACATGATAAATATCCTAAGTCTGATACCTAC TAGGCGTCCCTTAGCCCCTGAGAGAGAAGGTCACCCCTTTAATTATGTCTTTAGCCGTGGACCACCACATGCTGCCCTTA TCTCTCCTTTTCTAGCCTTCCCTTAATCGCTCCATGCCTTAAGTCTGAGCGGGTCCTACAGGACTAGGCCCCGCCCAACC TACTTAAGCTAGCTTAACTTTAAGATTCTTACAAATATATCTTTTAAAAAAAAATATAAACTAATGAGTGTGCATTTTCA TTGTCAGTGTAATTGTCACCGGCCACCGATCTGCGTCTCCATAAAGATCAACATAATTCAGAGACACTAAACCTCTATCA CCAACACAAAGACAATCAACCTTTTTTTACGTTTCAGGACACCATAATAGAGATTCTAGAGAAACATAATGAGAGAGGAT AGATGGCGGTGGTTTTTCTAGAGTTGTATTCGCAGGAACCGATGGGAAGAGGCGCGATCTCACTCTGCTCTAAAGGAAAG GCCACCCTTGATGCAAACCTTGTGCCATTGGCGTGGCATTGTGCCACCGTGAGAAGGAGGTCTCGAAATTAAACTTTTAC CGCCGTAAGTAGAAGGAAGGGGGAGAGAGAGGGACAACGACTTCACACCGCCAGAGAAGGCACTAGTGCCGTCGTGTGCT GCTGGAAATGCATCGTTGTTATGGGAAACCATTGTTAGGACAAGAAAATGGTTGAATAGCAAAGAGAAAGAAATGTATAG TCTTTCGGGGGGAAGAGATCAAACCTCATCGCAGAGTTAGATCCATGAAAGTTGTGTCTAGGATCAAACCTACTCTAATA CCATGTTTAGAGATAAGCAATGCAAAGAAAAGCAAGAAAAGAAGGAGATAGAAGAGAGGGGAAACAGATGTGCACTAGAG TTTACATTGTAAATAATTAATTTATTAAAATATAAAGTGTTTACTCTATTTATAGTAATGGGTAAAGTCCTAAACCTATT TAAATAGGAAAATAAATAAATCTAACCAATAATCTAAATTAACTAAAATAAGATGATGATATGATATAAGATACTCTTAA ATATGACGAACATATCATATATATTTTTCACACCTTCTAAGAATTCATTTCTATAATTTGTGTAAATAGACTGTTTAAAA TTTTTAGAACTCTCTTTATGCAAATCTTTCTCTTTTTTGCTTACCTTAATTGATTTAGTTTTTAGATACCAACTTAACTG GCCATCAGTTAACGGGTGGTTGGTTGAAGTAGTACATGCTTGATTCCCCTTAACCAATGTCTTGAGTTCGAGTCTTGTGG ACAGAAAAAAACCCCGCTTTGAGAGTTAGTCCACCATAATGTGGTTGTTACCGGCTCGAACAGGATTGTCTCCGAAGGAG GACAACTATCTTATCTTGCAAAAAAAACCTACTTAATGGGCTGGGAATGAAGATTCCACCATCTAGCTAGCTAGCCTTTT TTCTCACACAAGTTAATGAATAACTGCTTTCACTAATTTGGTTCAATAACTATTCGCTTTCAACAGTAGTTCTGATTCTG AAGGTTTCCCTGCATTAGTTATTCAATCTTTGCTCATTTTTGCTTTCCCTTTGTCGACAGTATGGAAAGAATTCTTGAAC GATATGAGAGGTATTCATATGCGGAGAGGAAAATTGCCGCGAATGATCCACCACAAAATGTATGACACCTTCTCCTACTC CTATGATTCAAACCTCAACTCACTTTATTTATCAAATAATATTGATGTTAATCGGACATTAATTTTTTTTACTTATTAAA CCAACTCATTTCTTAATTTGCATTTTATTTAGTAGTATACTTCTATTATCATCTTCTTATTGATTATATGTATAAGTTCA TAAAGACATTTCCAACTGATCCACGGCGTTCAATTCATATCCTTCTTTATTGCCATTCTTAAATCAACTGCATGTCTATA GCAACTTCTCTTTGCTAGAGATATTTACTTGAATCAGAACACTAATTTAATTCTACATTTTGATAGGAAAATTGGACTCT AGAGCATGCAAAGCTCAAAGCAAGGTTTGAAGTCCTTCAGAGAAATCAAAGGTATATATTAAAATAAGTATGAGCTAGTG GCTATGTTGTGAAAAATATGTAACATCAATAGAGTTTGCTGCTGTATTTTACAGGAATTTTATGGGAGAAGAACTTGATG GCCTTAGTATCAAAGAGCTTCAGAATTTGGAGCATCAGCTTGATTCCGCTCTCAAACACATTAGATCACGAAAGGTAAAA CCATGCAGCGCTAACCCAGAGCTTCGGTTAAGTAGTTTTAAGTTAATGTGAGTCATTGTGACAGTTAACTATATATAACT TGCATGCAGAACCAACTCATGCATGAATCTATTTCAGAGCTTAATAAGAAGGTACGCTCTTCTTTCTTTCATTTTGTTAT CTTATTTTGGACAAATAATCGTTGACCGTTGTGCGGTAGAACACGTGTGGTTGGTTTAAGTGGTATGTGTTTGATATTTT CAAAGCAATATTTCGAGTTCGAGTTTTGTAAATTTGGAGAGTTATAATTAAGTTCCACTATTATGATGTGAATGTTTTCG CCTTGAAGAGAATTGCTTTTCTATGGATGATATCTGTAAGAAGAAAAAGAACAATTTTTCCTTCTCCTCTATATGATCAG TTGCACATGTTTCTTCTACTACTAACACATGTAACTATGTAAGCATAAATTGGAATCCATACATGATTATAGAACACCAA ATAGAATGAGATAGATTGCGTACCTAACAAATCATGAACGGAATAAGAATTCTTGTTTTTATCACTGGATCTTGTGACAG TCAAGTGAAAAGTGACTAGGGCTTCTTCTGTATCTCACCCTTCCTTTCACAGCTATCAATGGGGCAAGCTGTGGAGCCAG ATTAGATCTGTGATTACAGAGGGGACCTAACCAATATATATTTAACCCTAGTTCCTTCCCATTATGGGCTTATGAGTTAA GACTTACACTGTAGCCCACACTAATCAATTACAGATATACAAGCTCAAAATATAGATCACTTAAATAATTAAGTTGGCTT ACATATACACCATAAATTTGGATCATGAATTAGATAAAAACTACAATTGATTGAAGCCCACAAGAATTAATAAATAATTC TTACAACACATTACAACGTGTTAGAATATGTTTCTTATCGGCTAAAACTAATTTGCAGAAAAGTATTTTTCACGATTTTT TTTTTGTCGACATCGTAGACAAGGTGATTTTTTATTGTTATTTATATATATGTTCTTATAAAATTTAGTTAAAAATTAAG GATGCTTGTAAATTTGTAATGTAATTAATTTCAATTATAAACATTAGAATTGTAAAATTATTAAACTTTTAATTTATACT TTAGACCACTTGCACAATTTTTGGATCATCAATTGTACAACACAATGCAATTTGTCATTTTGTATCTACAAGTTTTTTTA TGCTCGACAAATGCAGGATAAGGCCCTCCAGGAACAGAACAACTTGCTATCGAAGAAGGTAATTAATTATATATAAATAG TTTCAATTCCTTAATATATAGCTCCCGTAAACTGCTTAGTGTCGTTTAATTTGGATCATATATACTCACTTTACATTACC TCATGATCTGAGTGAAAACTAGATAAAAGAGAAAGAGAAGGTAGCGGCTCAACAGGCACAACTGGAGCGACATAGTGATG ATATAGATCATCTTACATCCTCTGTCCTTGTACCTCTGCAATTGGAAACCTTGAATATTGGGTAATTAAGTGTATCTAAT TACTTCATAATTGTCTTTCTTTATTTTGAAGGATGAACATGTATTTGTGTATGAATTTGCTTCTTTCCTTTACTAATTAT ATGATGAGCATATAATTAAGGTGCACTATGCTTCATGACTTCAAGATATTAATACTAAGCGGTTTACTTGATGTAGAGGC TCCCTACAAGGCACAAGTGATGGAAGAGATAATGAAGCAACCACAACTCAAACCCAAGCTAACTCCCTTCTTCCACCATG GATGCTTCGACCTATGAATGAATAGTAAACTACATACACTTACACGACTTTCCGTATGTTAAAGACGAACATGCATGGTT ATTAATTATTGGCTAATTAGTATATAAGAAACCTACCCTAAATGATGTAAAAATGTTCAACTATATCAAATGCCTTTCAA TGACTAAAAGCTAGATATAATTTTTATGTAATTTGTCTGCATATATGGTTACATTACAAAGTTAATTGGTTTTAAGTTAA TTGTATGGCTTTGTCTATATACCAGCCTATGTTTTTCTCCATAACATATCAGTATTGTAATTACCCAAGTATCATGTAAT C
CDS sequence (LotjaGi1g1v0210500.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGAAGGGGAAGGGTGCAGTTGAAGAAGATCGAGAACATGGTCAACAGGCAAGTGACGTTCTCAAAGAGAAGGTCTGG TTTGCTTAAGAAAGCTCATGAGATCTCAGTGCTTTGTGATGCTGAAGTGGCTCTCATAGTCTTCTCCAGCAAAGGAAAGC TCTATGAATACTCCAGCGATCCCTGTATGGAAAGAATTCTTGAACGATATGAGAGGTATTCATATGCGGAGAGGAAAATT GCCGCGAATGATCCACCACAAAATGAAAATTGGACTCTAGAGCATGCAAAGCTCAAAGCAAGGTTTGAAGTCCTTCAGAG AAATCAAAGGAATTTTATGGGAGAAGAACTTGATGGCCTTAGTATCAAAGAGCTTCAGAATTTGGAGCATCAGCTTGATT CCGCTCTCAAACACATTAGATCACGAAAGAACCAACTCATGCATGAATCTATTTCAGAGCTTAATAAGAAGGATAAGGCC CTCCAGGAACAGAACAACTTGCTATCGAAGAAGATAAAAGAGAAAGAGAAGGTAGCGGCTCAACAGGCACAACTGGAGCG ACATAGTGATGATATAGATCATCTTACATCCTCTGTCCTTGTACCTCTGCAATTGGAAACCTTGAATATTGGAGGCTCCC TACAAGGCACAAGTGATGGAAGAGATAATGAAGCAACCACAACTCAAACCCAAGCTAACTCCCTTCTTCCACCATGGATG CTTCGACCTATGAATGAATAG
Protein sequence (LotjaGi1g1v0210500.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGRGRVQLKKIENMVNRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSSKGKLYEYSSDPCMERILERYERYSYAERKI AANDPPQNENWTLEHAKLKARFEVLQRNQRNFMGEELDGLSIKELQNLEHQLDSALKHIRSRKNQLMHESISELNKKDKA LQEQNNLLSKKIKEKEKVAAQQAQLERHSDDIDHLTSSVLVPLQLETLNIGGSLQGTSDGRDNEATTTQTQANSLLPPWM LRPMNE
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SMART | 1 | 60 | 60 | 3.4E-40 | ||
| ProSiteProfiles | 1 | 61 | 61 | 32.198 | ||
| SUPERFAMILY | 2 | 93 | 92 | 2.62E-34 | ||
| CDD | 2 | 76 | 75 | 3.28889E-43 | ||
| PANTHER | 2 | 200 | 199 | 3.8E-108 | – | |
| PANTHER | 2 | 200 | 199 | 3.8E-108 | – | |
| PRINTS | 3 | 23 | 21 | 2.7E-31 | ||
| ProSitePatterns | 3 | 57 | 55 | - | ||
| Pfam | 10 | 57 | 48 | 3.3E-25 | ||
| Gene3D | 13 | 78 | 66 | 5.8E-29 | ||
| PRINTS | 23 | 38 | 16 | 2.7E-31 | ||
| PRINTS | 38 | 59 | 22 | 2.7E-31 | ||
| Pfam | 87 | 172 | 86 | 6.1E-30 | ||
| Coils | 88 | 108 | 21 | - | – | |
| ProSiteProfiles | 88 | 178 | 91 | 16.765 | ||
| Coils | 125 | 145 | 21 | - | – | |
| Coils | 151 | 171 | 21 | - | – | |
| MobiDBLite | 212 | 236 | 25 | - | – | |
| MobiDBLite | 212 | 246 | 35 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | RNA polymerase II regulatory region sequence-specific DNA binding | Interacting selectively and non-covalently with a specific sequence of DNA that is part of a regulatory region that controls the transcription of a gene or cistron by RNA polymerase II. | ||
| Molecular function | DNA binding | Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid). | ||
| Molecular function | DNA-binding transcription factor activity | A protein or a member of a complex that interacts selectively and non-covalently with a specific DNA sequence (sometimes referred to as a motif) within the regulatory region of a gene to modulate transcription. Regulatory regions include promoters (proximal and distal) and enhancers. Genes are transcriptional units, and include bacterial operons. | ||
| Cellular component | Nucleus | A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent. | ||
| Biological process | Regulation of transcription, DNA-templated | Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription. | ||
| Biological process | Positive regulation of transcription by RNA polymerase II | Any process that activates or increases the frequency, rate or extent of transcription from an RNA polymerase II promoter. | ||
| Molecular function | Protein dimerization activity | The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits. |
Expression pattern of LotjaGi1g1v0210500.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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