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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0238800 |
| Transcript ID | LotjaGi1g1v0238800.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Protein FAR1-RELATED SEQUENCE 3; TAIR: AT2G27110.1 FAR1-related sequence 3; Swiss-Prot: sp|Q9ZVC9|FRS3_ARATH Protein FAR1-RELATED SEQUENCE 3; TrEMBL-Plants: tr|I1KC36|I1KC36_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0238800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:56840418..56845609) extracted from Lotus japonicus Gifu genome v1.2.
GTTCAAAGTTCAGAGACTGTTATATATTTTAACCCTATTTTTTACCTCAGAGGAGATCGAACCCGGGCAAGAAGCCTAGA CGAAATCCCTTAAGGAAACACATTCACCACTTTTATCATAAAAAAAAAAAAAAATCCATTTAATTGAGTTTCTTCTGTTT TGTTTTTCCTCGCTCTGCATAGACTTCATTCTCTTATTCGCTTCATCATCATCACTTGCAGCAGCAATTCTCTAGGTGCG TATTGCATCCCCCTCCTTCTCTTTGCTCTTTCTCCATCTTCTCCTAAATTATTTTTTTTTCTCCTTTTTCTTTGAAACGC AGTGAACTATTCTATCCAACCTTGTGCATCATTGTCTCGAGTCTGGTATGTTTTTGTTCTTGTTTTTTCTTTTTCATTTT ATCTTTTCAGTGAGAACTTGGTCGGCGTTTAGTTGCAATTACTTGCCCTGCCTTAAACGAAAGAAGTTAGTGATGCCTAG GTCGAATTCTTAATAGCTACACTAGAAATCATTGAGCAGCATGTGAAAATTGTTCTTCGAAATAGTGCAGAATGAAAGGT CCCTTGTTCTGATTAATCTTTCAATTTGTGATTGAAGTTGTTGTATTGTAGCTAAAGAAGATTAATGTTCATTTTGTAAC ATAATGCTTTGTGTTCCATATTTCTTTAATCTGGAAGAAATATCCACATTTTCCTTCTCAAATGCTCACTTTAGCGCTCC ATGTTGCTTATATGTGTGTGTGTCTTTCACCACCCTGGTTTGTAGTTTTTTGATTGAAGAGATCTAATTGTGTGGCATCT TCATGCTCTTCTGTAATGTTTTGGGATTTCATATTGGTAGATACACCCAATCTTTCCTAATTCGTTGGCCGGTATGGAGC AAACGGTGTGGGGTCATTTGCCAGTCCTGCTAAGGGCAACTACCAAAGAATCTATTGAGTACATTCTTCAAGCCCTTTGG AGGACCAGAAAGACCGGTCTTCACTCTGCTGATCGACGCATCATCCTAGACATGCTTCAGCTCCAAAATGAATCTGACCT TGACCCAGTGCTATACTCTAATCTCTCTCTTATTTTGTTTTTATAATTATATAATGGCAGTTACACTTTCTGTTAAATAG ATTTGTACAAAACATATTTCCCTGTGTTATGCTTATGGCAGGTCTGTCTGTTCATTTGGTTTGAGAAATTGAAACACAAG AAAATATGGAGTGTATATTGTTTCCATTTTATAGTAACAATAAGCAAAGGCTGCAAAGTTATAATGATATCATCTCAAGA TGAAAAAAAAATGTTATGCAAATCAGTAATTACTAAAATACGCTTAGTTCTTTGCTTCACTGCTTTGTTCTAAAAAGGAA GAGAGGTTGGGTCTTCTTTTTCTCTAGAAGCTAACCAATTCTGTAGCAGTTCAGTCATTTCATGTTATGATTTTAAACAA TCCCCATATACTATAATACATAGAAGCTTGTAAAATGTGTAGCACTTTTTAAGCCTTTTGGATAAGTTGGTGGTTGGTCC TGGGAAACAATGAATTTAAGATATGGAAGGGTGGTTGGTTCCTTCAACTACCATCTTTTTCAATGTGTCAGTAATAGTTT TCTTTAGATGATTTCTTAAGGTACAGATTTTCATTGTAACTCTATCTGCACTTCTGCAGCTTTTAGTTTGCCTCCGAATG TTAATCAGGAGGTGTGTTTACGAGAATATCAGCAAGGATGATATTCCAAAGCTGTTTCCAGGTGATGTTCTGCCCGAATT GCAAAACCTGTTGACACTTCTGTTGCACAAGTTTCAGCAGGAGTGGCAAGAAGATGTGCTGAAAGATCAGGTCAGTCACT TTACTGCAGATTTTATTTGTGAACTAGATTGGATGTTTTGATCTGACAGTATATTTAAATTATTTTATACTCAGAATATA GTGCCTCGATTAAAGGCAATGACATGGAATATGACAAATCAGGATAAAGAATCAACAGACCCTGCGGCTGCTATTAATTT AAAGGTAAATTCTGCTTCTATACTTCTGTAGATGAAATAATTTCCTTCAACACCTTTTATCCTGCACTTGTTTTCCTTCT TTAAACAGGTGAGAAATGACAGATATGGATATCAATCGAGTGGTTTAACTTTTATTATGTATATATGCATTGCGTGGAAA ATGATCAAATGTGGTTTTATGTGACTCTTAATTGCATACTTTTCAGCTCCAAAGCGATGCTCGATTTCACACGGGAGAGC TGGATGTAAAGTTTCAATTGGCCACAGATTCTCTAGAGATGATGCTGAAAGCAATGTACAATGTTAGAGACCAGTTTTCA ACAATGGTAAGTATTATACTTAACTTTGTTCTTTTCTTCCAACTGATTTGGAATAGAAATTTTGTAACTATATGATGTAT GATTATATATAATTTTGCTGTATGATTTTCTAATGAACTTTTTTGTGTGCGGTCATAATGAGCTTGTTATATGATATCAC TTGTCAGGATGAGGTACCAAATGGGATTTAGTACTAGGAGCCAATGGAGTTCCAAAACAAGATGTCTGAATGAAAGGTAT GCTTGACTAATTTATTACTTGTTGCTTTGAGATTTTGCACATTTGTTTTTGTCGTGAGAGCGGCCATAAGTAACCTGTAT TCGAGATTTTAATTTGAGCATGTTCTATGACTTGATCACGAATTAGTTAAGTCAATTTGCATTTGCTTCACATGTTTAAC TCATAAATGGTCTTCATGCAAGTTATATAGAATGAGTTTTGTATATTGATTTTACGTGGTGGTTTGATTGGACAGTTGAT CTAATCATATGGTTCAATTAAATGGTCTTGTATCAATGAAGTTTTATCCCACTAGAGGGAGAAGCGAGAAATTACATTGG ATTTGCGCTTATATATTAGACATTTTATTACGATGGGGTGTAGGTGGGTGGGTGACTGGGTGCATTTTATTTATTTAGGG AGAAGGTGGGGAGACTATATTGGACCTTTTTAATTAAGGAGCAAATGAAATGGGTAGGGACCGTATCGGAACCAACTTCA GGCATCATGTTCATTTGCGCTTCAGCAACAACCAGATGGGTAGGGATCAAACACTCCTTGAAGACTAACTTATTCCTTCG ATTTCAAAAGGCCCTAGACTATGAGAAAAATGCGTTCAAGGCCGTTCCATTATCAACTTCCATCCAACTCGATAGCCAAT CCACAAATTTCACCTGAGCATCAGAGATACGGATTGAGAGGGAAGAGGTAAACCAGATAGTGCGGGTAGCCGGGCATGAT AGTTGATAAGAACAGATGATCTACCGTTTCTGGTTCCAACGAACAGAAGGGACAAGCCATGTTGATCTGAATACCTTTTT GTGCCAGATTAGTAGAAGGATTGTTAGAATTTTGGGTCACAAATGTAGCATTTAAATGTGTTAAAGCCATTATTTAACTA GCCAAAACTTAAGTGGTCTATTTGATATTGATTTTATGGCTAAGAGCATATGTGTTATGAAAGGGTATTATGTAGATACC ATAAGACAATATTCTAAGAGCATATGTGTTATTGAAAACTGAGATGTAACTGAAGTCTGTTACTTATATGGGTTATGGTC CCCATTTGTAGACACGTGAAAAAAAAACTCTCTTCATCTCCATCAGAAGAGAATATTAGGAAACCCTAAGGTGATCTACA ACTAGAAGATCACACTCTTAAACCTTCAACAATTCCCAATGGACCTCTCATGGGGGAGAAGCGAGGATATAGACCTAGTT ATGCGTGGACAAGTGTCCTCCGCTGTAGTTGAATTTTTGAAAAAGATGACATTTGGAAAATAGGCGATGATACTAGTGTG CGTATTTAGGATCAATGATCATCAGATTCCTAAAGGCCCCCTATTATTTATTGCCAAAATTTGGCGGATAAGGGTATTAA AATGGTTGGGGATCTCATATAGTCCATGGCCTGTTGGGGTCGCCATCTTACCTCTTTTGATTTTTAGCCCTGAAACTGCT CATAATTTTTTTTTGCATTTCTCTATCTACTTATTCTCAACAAGAAATGTTTATTTAGCCTTTTAATGGTGATGGTGTTT ATTCAACTCGTTCAGGTCACAATTTTATTAGGCAGCAGGCATAGTCCAATTCGGCCTCATCTCATCAGTGGCGGCTCTTG CCCCTATAGCTTGGAAGCGCCTTTGGCATTCAAAGGCGTTACCGAGGTGTAAGGAGCTTGTTTGGAAGACTTGCTATGAG ATTGTTCTAGTGTGGGGTGCTCTTAGCCGTCGGGGAATGAATGTGGATACTTTTGTCCTTTTTGTGGTGTTGATTGTGAG ACCATTGCCCATGCTTTGTTGTTTTTCCCAGAATCACAGCAACTTTGGTTTGGGTCCTCTCTTAGATTGTGGTCCTCTCT TAGAATCACAGCATCTTCGGTGCAGTTCTTTCACAGTTTCATGCAAGGTGGGAATGATGTTGCTCTTCAAATTGTATTTG GGAAAGGAGGAAAAATTCGTTTATGGTGATGGTGCAGATTCCTTTGGAGGTGGTATTCCAGCGAGCTCATAGCTTTTTGC CACCTCCAGACCTGCGAGCCTCAGCGAGGGAGAGCTTGCAACTCTAGTCTACCTGGAGTCGCCCATCAGAGGGGATTGAA ATTATCAATTTTGATGCCTCAATGAATGGTTTGCATATTGTGGGTTTTGGCTTCGTAGCAAGGAATTTCGAGGGTGAGGT TTTAGCTGCGGCCACTGCTTCCTTGTTCGATGTTTTTCCACCGCTGATTCCGCAGGTATTGTGTCTGAGATGGGCTATGT CCTTAGCTACATATTTGAGTGTTAGGAGAGTGTGCTTTGATACGGAGTGTTTGTAGCTCTTCAACATTTGACGTAAACCA ACAGTTGGCAGATCCCATATTTTCTATGTTGTTCATGATTGTCGTGATCTCGCTCTTAGTTTAGATTTTATGGATACCTC TTTTGTATATAGAGGTGGTAATAGTGTTACTCACTCCCTAACTTATTGTAATTCAGTTTGGATGGAGTAAATGAATACTT CTATGTTTCCTCTAATATGTTAGTTAGTGCCACTTCCACAGTGAGTTCATTTGATTCTTTCTTCTTGAAGAATCTTCAGG TAGCTGGGATACCCGTTTTTACAAGCTGAGATCTGCAAAGATATAAAAAACAGAACATAGTTAATGTCACTG
CDS sequence (LotjaGi1g1v0238800.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAGCAAACGGTGTGGGGTCATTTGCCAGTCCTGCTAAGGGCAACTACCAAAGAATCTATTGAGTACATTCTTCAAGC CCTTTGGAGGACCAGAAAGACCGGTCTTCACTCTGCTGATCGACGCATCATCCTAGACATGCTTCAGCTCCAAAATGAAT CTGACCTTGACCCACTTTTAGTTTGCCTCCGAATGTTAATCAGGAGGTGTGTTTACGAGAATATCAGCAAGGATGATATT CCAAAGCTGTTTCCAGGTGATGTTCTGCCCGAATTGCAAAACCTGTTGACACTTCTGTTGCACAAGTTTCAGCAGGAGTG GCAAGAAGATGTGCTGAAAGATCAGAATATAGTGCCTCGATTAAAGGCAATGACATGGAATATGACAAATCAGGATAAAG AATCAACAGACCCTGCGGCTGCTATTAATTTAAAGCTCCAAAGCGATGCTCGATTTCACACGGGAGAGCTGGATGTAAAG TTTCAATTGGCCACAGATTCTCTAGAGATGATGCTGAAAGCAATGTACAATGTTAGAGACCAGTTTTCAACAATGGATGA GGTACCAAATGGGATTTAG
Protein sequence (LotjaGi1g1v0238800.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MEQTVWGHLPVLLRATTKESIEYILQALWRTRKTGLHSADRRIILDMLQLQNESDLDPLLVCLRMLIRRCVYENISKDDI PKLFPGDVLPELQNLLTLLLHKFQQEWQEDVLKDQNIVPRLKAMTWNMTNQDKESTDPAAAINLKLQSDARFHTGELDVK FQLATDSLEMMLKAMYNVRDQFSTMDEVPNGI
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 187 | 187 | 1.3E-82 | ||
| Pfam | 118 | 185 | 68 | 4.7E-5 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi1g1v0238800.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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