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LotjaGi1g1v0241800.1

Overview

Field Value
Gene ID LotjaGi1g1v0241800
Transcript ID LotjaGi1g1v0241800.1
Lotus japonicus genome version Gifu v1.2
Description Methyltransferase-related family protein; TAIR: AT1G78140.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; Swiss-Prot: sp|Q8LBV4|Y1814_ARATH Uncharacterized methyltransferase At1g78140, chloroplastic; TrEMBL-Plants: tr|I3T3B6|I3T3B6_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0241800
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr1:57800631..57805626) extracted from Lotus japonicus Gifu genome v1.2.

ACAAAAATAATTTTTTTTAAGTATCACTGCTAGCCACGTGAGAGGTCGGTCTTCCCCTTGAAGGTACTGTACTACTGTTC TGCAGATATTCGAATTGTGATAGCGGTAATGGCTACCACACGCATAGCAGCTACTGGTATGTACCTGCGCACACCAACAC TCTCCTCCTTCACGCGCACCACGCGCCGCCGCTTATCACCCACTGTTTTCCCTTCAAAGTTTCCACTTCAACTTCGAGCT TTTTCTACCGCTTCGCCTATCGTTGACCCCAAGCCCACGGTAAAAATTCTTCTTCCTCCAATTCACAATCCCCAATTTCA GTTTTTCTTGTCGTTTACTTAATGTTAATTATCATTTCTGTAGTTTATCAAACATGCTGATAGATGAGGAATGTGATTTT TGTGTTGAAGGATTCCATTGTAGTTGATGACAAGGAAGTTCGCCGAAGCAGTAACTCCTTGGCTTGCCCTGTTTGTTTTG ATTCCTTGACATGGACTGGTGATTCTGGTTTATCCGTGTGAGTTGATGTTTAATCGATATTTTATGTTTTATTGCATATG CGCGTATGCAAGTGTTTGATAGAGCTTATGTAAATAGGTTATGACCTCCTGATAAGTTCTTTGAGCTTATTTTCATAAAC TATTTATGTTGGCTTATGAATTAGAAATTATGCAGTTATGCTTATCTATAATCTATTTTGAGCTTGTTTGAATAAGTTTC TTAATTAGCATATGAATAAAGCACTCATGCGATAAATTATAGCCAGAAGCGCTTAAATGCTTAATTAAGCCGTTTACCCA AACGCAACTTATATACTTATTCAATAATTGCTTATCAAATGAGAACTTATATCAGAAGCAGCTTTTGTATAAGCTGATTT TTATTTGAAATTTATTGAATGAAACTTAAAAAAAATTATTGCTAATTGAGAAATATGTTTAAAAGTTTAACCAAATGCCT CCTATTTTAGGTGTTTATGTCATAAAATAGTTCAATTAAGTTCTTCCAAACATGCTATGTAGTATGTATATTTAAATATA TAAATATGTGCAGACTTAGCAACTTATGTGCTTTTGTTTCTTCATTGGATAATTTGATGCAGAGATAGTATCCCTGTATC ATCTTTGCAATGTAGCACCTGTCAGAAAACATATGTTGGTAACCAAACACATCTTGACCTCACGGCAACTAGTGGAGCTA AGAATTATGGTGATCTGATGCCAGCTTCCACAGAGCTTTTCAGGCATGCAATTCCATTATTTTTATTGATATAAAATGTT ATTTTTCCCTTGTGAATTTTTAGCTACATCTGGTCATTTTTTAGAACTGTGCATGTTGGTGACAATAGAAGCTGAAAAGG TTTGAACTTTGATGCTGAATGCAAGCAAAACCAAGTATTGAAGATCTTTGTTACTATTATGAGCTAACCACAGAAGTTTG GTCCAAGTTTTAGTGTATAAGATCAAATTATCAGAGCATGATTATTTCAAATGGAAATTGAGTGGTTTTTTCTTGTGGAT CGCAATGATTTCCCAAAAAAATAGTCTGACTTAGGATATATTGTCTTTACGAAGGCTTGTCTAAAATATACTGGTGGTGG TGAGTGTAAGAGGTGTTGCATGATAACTAGTAATCACATTGTTTTATAAGGAGTTTGGTAAACACTTTCAGGCAAAGTAT TTTTCACCTATTAATCATGTCTCTTCATTTGATATAGTACTTTCAGTTATAGATTTTAGGTATCACTGATATAGTTTAAT AAACGGTCTATTAAGCATAAGTTATAAGTATGCATATAAACTTGTTGTGCAACTGATACACTGATGCCTAACAGTATCAT TGATTGTTTATTGAATCAGGGTGCCATTGATTTCATTTCTCTATGAGAGGGGTTGGCGTCAAACATTTTCTGTATGGGGT GGTTTCCCAGGTCCTGAGAAAGAGGTTAATCAAATGTCTCTTTCCTAATGCCAATTCCCTCTCATTGAAACCAACAGTTT TCCCCCTTTAAAATGGTTACTCTTCAATTTTCTGCAGTTTGAACTGATGAAGGGTTTCCTAAATCCAGTATTGGGTGGAA ATATCATTGATGCTAGTTGTGCAAGTGGATTATTTTCAAGATTATTTGCAAAAAGTGGACTATTTTCCTTGGTTGTTGCT CTAGATTACTCAGAAAACATGTTGGCACAATGTTATGAGTTCATTCAGCAGGAAGACAACTTTCCAAAAGAGTACACATA TTTCTTAGAATTTTTTTGTGTAAACTTTTGAATTCAAAATTTTAAAGAAACTGTTTAACATATAGTTTGTTCATGTTTCA ATTATTTATCACTCAAATTTCCGTTGTTAGGAACTTCATCTTGGTAAGAGCAGACATAGCAAGACTCCCTTTTGTTACAA GTTCTGTTGATGCTGTGCATGCAGGAGCAGCTCTTCACTGTTGGCCTTCACCATCAGCAGCTGTAAGTCTCTTTTTATAT TTGAATTTTACAAAAAATTACTCCATTTTCTTAGAGTATCAGTGGCTAATGGCTATGGCTTTGAGTAAAACATTGAACCA TGGAATCTCAAAAGGCTTTTGCAGTATTGTGTCAGCCAGCAATGATGAAGAACATTGACATACTTCCAATGATGCTGGCT GATAGGCTTTTCTGGAGTTTTACCATAACTTTTTGGATAAAATAGTTCACTTTATTTGTCATTTTACAATCGCGAAGTTA TGTCAAATGGTGACGCCTAGCATCACTCTATTTAGCCTATATCACTTTTTGTCTTTCTGAAATTTCCATGATCTGTGATA AGTACACAGGGTTAGCTAGTTAGTATTAGATTTTATTTTATGTTTTCGAAAATAATTATTAGATTTTATTATTAGTATCT TTTATCCAGTCAGCATTAGATTTTATATTTTATTAGGTTATTTGGTTTAGTATAAATATAGGTGAGTGTACCTTTACTAG GATTAGTTTTCGAGAGAATTAGGTTTGGAGTGGCTGGTTATTGGATACAGTTTGTAATTATGAGGAGAGTGTTTGGCATC TCTCTTGTATTTTCCTCTGATTCCTATTTGGGAATTAGGGTTTTCATCAATAATTCTTCTACATTTTCTGGGTTCTAACA ATCTGCTTTAGCAGGTAGCTGAAATAAGTTGTTTTTACAACCTGAAGGTTTGTTTGTAGGAGGTTAGGTTAGTGGAACCC AAAAGCAAGGGGATCTGCTTCAATGGGCTAATTAACAAACCACAATAGAGGACATTACATCTTGACCCAAAAACCTTAAA GAAACAGTATATATAGGTCTGTTTGCTTATATTATATTCACTTTATCTGTTCTAAACCGATATGGAACTTCAACATTGTC CCCTCTCCTTAAACCATGAGTCAAAAGGGGAAGCCTTTTCAAGTGCTACTAGAGTTACCAACTTCTTGTTCATTATGGGT TAAGATCAAAACTTGCACTAATCCCATCTTTAAATGCTAGATAGCTAATCTGATACCTTTAGCTTAGGTTTGTGGGACCC CAATAAATCAATGGGCTTAGTGACAAACCGCAATAGAGAACTTGACACTTTATCTTGACCAAACAACCTAAAGGCAGTGT GTATATGGTTTTGTTTACATATTGTTGTAAATGACACTATTTTATGATAGACCATTTCATTATTTTCTTTTTCTTCTTCT AATATCACCAGGATATTGAGTAACTAAAAGGATTTTTTTTTATTTCTATTTTTTAATAATTAGAATTCATTTACAACCTA TAAACATTAGAGCTTGAACATTGTAAATTATGACGAATAAGATTGCAAATTATTCAGCTCTTTTAAGATGATATCAAAGC AACAGAGCCAATTCTAAATCTTATATTGAATCCAAAATCCCGCCTCCATTGTAAACCTCAACTGCCTTCATTGCAGTCGT CAGTTCTACATACTCTACATTCTAGATGTCCAGTCCCAAGCATGAGGAGGGATATGGCCAAAATAATAATTATTATTATA GCTTCAGCAATGCAATCTTCACCTTACGAGACAGTTTTTCAAGTTGAGTTAGACCAGGTCAAAACTCTTAAGACATTTAT TCATTAGGCCATTATTATCCAATGTGAAACTTCTTCTCTCAAACTTGGATTTCCAACCAATTCGTTACTTCGCCATTGCA TAGCTTTGTCAAATGGTCATGCCTAGATCGTTCTATTTACTCTATATAACTTTTATTTTCTCTATAATGCTCATGATCTG ATTTTTCAGGTTGCTGAAATAAGTCGTGTTTTACGACCTGGAGGTGTCTTTGTCGCCACCACCTACATACTCGATGGGCC TTTTACTTTTGTCCCATTTTTAAGCACGGTGCGCCAGGTATGAAAATTTTCGGCTTGGGATTCTTGTGTCCGTATTTGGT TTACCAAAATAGATGTTTAATCTAGAAATTTTATCATTTTCAATTTTTAAATTCTATTGAGTTTTGAATAGTCTGCTATT TGTTTCTCATTTTAGAATATAAGGCAAGCATCTGGGAGCTACATATTTCTCTCTGAACGTGAACTTGAAGATCTCTGCAG GGCATGTGGGCTGGTTGGGTTTAAATGCATTAGAAATGGCCCTTTTGTGATGATTTCTGCTGCAAAGCCTGAATAAGGTT CGATTTCTCTGGTGCTATTGATGCTACCTTCAATACATACTTTACAGAACATCTTTTTTGCATACTCAATTTACTTAAAT AGTTATAGGCAGGAGGCTTCGATTAGAGAAATAATGCTTATAGTTATATATACTTGTTTTCCTAAGATTACTTACATATC ATGAGTTGGACAGATCACCCCTATACATGTAAAAACTCAAGGGTTACACAGATGGTGAAGAGGAAATGTCATATGTAATT TATTCATTTGATATTTCAACTTTCTTGTCCTTTTGCATTTGATTCATATATCACAAACTCATCAAGTTCTGTCACTAATT ATTGGAATAATGAGAATATTCTTTACCATATATTGT
Download Genomic Sequence

CDS sequence (LotjaGi1g1v0241800.1) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGGCTACCACACGCATAGCAGCTACTGGTATGTACCTGCGCACACCAACACTCTCCTCCTTCACGCGCACCACGCGCCG CCGCTTATCACCCACTGTTTTCCCTTCAAAGTTTCCACTTCAACTTCGAGCTTTTTCTACCGCTTCGCCTATCGTTGACC CCAAGCCCACGGATTCCATTGTAGTTGATGACAAGGAAGTTCGCCGAAGCAGTAACTCCTTGGCTTGCCCTGTTTGTTTT GATTCCTTGACATGGACTGGTGATTCTGGTTTATCCGTAGATAGTATCCCTGTATCATCTTTGCAATGTAGCACCTGTCA GAAAACATATGTTGGTAACCAAACACATCTTGACCTCACGGCAACTAGTGGAGCTAAGAATTATGGTGATCTGATGCCAG CTTCCACAGAGCTTTTCAGGGTGCCATTGATTTCATTTCTCTATGAGAGGGGTTGGCGTCAAACATTTTCTGTATGGGGT GGTTTCCCAGGTCCTGAGAAAGAGTTTGAACTGATGAAGGGTTTCCTAAATCCAGTATTGGGTGGAAATATCATTGATGC TAGTTGTGCAAGTGGATTATTTTCAAGATTATTTGCAAAAAGTGGACTATTTTCCTTGGTTGTTGCTCTAGATTACTCAG AAAACATGTTGGCACAATGTTATGAGTTCATTCAGCAGGAAGACAACTTTCCAAAAGAGAACTTCATCTTGGTAAGAGCA GACATAGCAAGACTCCCTTTTGTTACAAGTTCTGTTGATGCTGTGCATGCAGGAGCAGCTCTTCACTGTTGGCCTTCACC ATCAGCAGCTGTTGCTGAAATAAGTCGTGTTTTACGACCTGGAGGTGTCTTTGTCGCCACCACCTACATACTCGATGGGC CTTTTACTTTTGTCCCATTTTTAAGCACGGTGCGCCAGAATATAAGGCAAGCATCTGGGAGCTACATATTTCTCTCTGAA CGTGAACTTGAAGATCTCTGCAGGGCATGTGGGCTGGTTGGGTTTAAATGCATTAGAAATGGCCCTTTTGTGATGATTTC TGCTGCAAAGCCTGAATAA
Download CDS Sequence

Protein sequence (LotjaGi1g1v0241800.1) extracted from Lotus japonicus Gifu v1.2 Proteins.

MATTRIAATGMYLRTPTLSSFTRTTRRRLSPTVFPSKFPLQLRAFSTASPIVDPKPTDSIVVDDKEVRRSSNSLACPVCF DSLTWTGDSGLSVDSIPVSSLQCSTCQKTYVGNQTHLDLTATSGAKNYGDLMPASTELFRVPLISFLYERGWRQTFSVWG GFPGPEKEFELMKGFLNPVLGGNIIDASCASGLFSRLFAKSGLFSLVVALDYSENMLAQCYEFIQQEDNFPKENFILVRA DIARLPFVTSSVDAVHAGAALHCWPSPSAAVAEISRVLRPGGVFVATTYILDGPFTFVPFLSTVRQNIRQASGSYIFLSE RELEDLCRACGLVGFKCIRNGPFVMISAAKPE
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

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Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR43591:SF48
38 350 313 6.0E-99 –
PANTHER
PTHR43591
38 350 313 6.0E-99 –
Gene3D
G3DSA:3.40.50.150
148 345 198 4.5E-28 –
SUPERFAMILY
SSF53335
148 347 200 3.99E-31
IPR029063
CDD
cd02440
183 291 109 8.30437E-14 –
Pfam
PF08241
186 285 100 2.2E-19
IPR013216

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0008168
Molecular function Methyltransferase activity Catalysis of the transfer of a methyl group to an acceptor molecule.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi1g1v0241800.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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