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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0248600 |
| Transcript ID | LotjaGi1g1v0248600.3 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Phosphopantothenate--cysteine ligase; TAIR: AT5G02080.7 phosphopantothenate-cysteine ligase-like protein; Swiss-Prot: sp|Q9LZM3|PPCS2_ARATH Phosphopantothenate--cysteine ligase 2; TrEMBL-Plants: tr|A0A1J7H8D8|A0A1J7H8D8_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0248600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:59663155..59668288) extracted from Lotus japonicus Gifu genome v1.2.
AAGAAAAAAAAAAGAGCAATATCAAAAACTAAACCAGCTGAAGCATCAAACGCAGAAAAAGGCCCAGCAGAAACGCATGC TGTCAAATTCTCCCAACCCACCTACACCTACACCCATCATCTAAATCAAACTTTTAATCCTCACCACAATTACATGAAAG AAGCTACCACTGAATACACCCAAAAAAATACCAAACTAAAAGAAACAAGAAACTATCCCCAGCACCCAATATAAGCCGAG AAGAGATCAATATAAGCCGAGAAGAGATCACCCAAATAGAGAGAAAACAACAGCAGTGCGACGTAAACACCTACGTCTAC GTGGGTTAGGCAGGTCATAACTCATTAGTAGTAGTTGTTAAATTAATTCACTTTTATTGCTAGTAGCTTAACAACTCACC AGTTATTGTTACTCGTTAATTTTGGGAATAAATGAAAAAGCCTAATTTAGTGTGACCCCCGTTCCACTCGATCCGTCCAA ACCCGAAGGTGTTGATTTGTTTGTTTGTGTGTATCATGATTCTCCCATGTTTGTTCGTACTCCTCTTTATCTCTGTTTTT TCATCATACTGTGCCATTTGGGTTTGATTGAAAGTTTTCTCATTTCTGAGTTTCTTAGAGTTAGTTACCCACGTCTTTCT GGATCGGATCATGCGTGTGATATTGTTTATGCATACTTGATTTGGGATTGCTGCTATGTGGGTTTGATTTTTGTTTCTAT GCTAAAAGGGGGCGGGATTGGGGAACATGGGAAACCCAATCTGTAGTTGTTTCTATGCTTTTTGGATTTTAGCTGTGTCG CGGTACCAGTGTCGTGTCTGGTGTCTGTGCTTCATAGCCAGTAAGTGAGCTGGGTTGGCTCACTTCGACACCAACATATT CTTCTTTGCCCAACTGAGTTATCCCAAAATTTCTCTCGTTTTTTTCGATTTTCCTCCTTCAGTTCGTATCTCTTCAGCAC TTAGGGTTCACCATCCTCTGAATTTCAGGCTATATTTGATTAGGTATATGAATTCCGAGCTCATATTTGATGGGTTTGTT TCCTAGCTTCATTATATACCATAATTTATTCAATTGGGTTTACTTAAGTTTTTCGCATGATTGGGTGTTTGTGAATACAT TGTGATAAGTCCTAGTGCATTGTCATGCAATTCATGATGATGGATGTGTTTCTGACATATCTCGTGAGTCTATGCAGGAG ATTTGATGGATGCAGAGAACGGATTGAAAGATCAGGGGCAAACCCTTGAAGCACAAGTCCAAGCCTTTTTTGACTCTGCT CCTCCTTTGCGGAACATTCATGAAATAACTGAGAAATTAAATCAATTCATTCACCGGAATTCTTCACCAGGCAAGTTGGC TTCTACAACATTAAATTTTGCATTTTCTTAAATGTTTCACTGCAGAGTTTCTAAATGATGTCTGGTGTTTTTTGGTCTCC CCAGCAAATGGGGAACCCAGGAGAATTGTTTGTGTGACTTCTGGTGGTACCACTGCTCCATTGGAGCAACGTTGCGTTCG CTATGTTGACAACTTCAGTTCAGGTCATAGAGGGGCCACATCCACCGAGTATGTTTCCCTCACCTTATTCTTGTTGAAAA GACTTTTGTAAATATTTATTTTCATCTCTTGAGGAGAATTAATTGCTGGTTATGTTGTAGGTATTTTTTGAAGGCTGGAT ACGCTGTTATCTTTCTGTGCCGGAGGTGATCTTCTTGCTTTGCAATAAGCCTTGACTTATGTTAGATATGTTGATGTTGA TTAGCAATCATTATCATGCAGGGGAAGTTTCCAGCCATTTTGCAGATCCCTTCCTGATGATCCCTTAATTGAATGCTTTG AGCCCACCACCAATGAGTTAAACATTCAAGGTTTCTTGTTTCTGTTTTCCCTTCTTTTCACATCATACAAAAAAAAATTA AGACTTCTAATTGTGTGAGCAATCTTCAACCCTAGATACATCATTTACAATGTACTTGATATCTTGACAGACTGATATAC TTCACAATGCATTTTATTAATTTTGTATTGAATGATGATGTCAAGTGTCTTGTGAGGAAAGTTTTTCGAGATAAGTGTTA CTTTTTATCATGATTCATCAAAGAAAAATAATAGTTTCATATGATTCCTTCATAAAATGTGAGTTTGTTCTTTCTTTCCC AATTCTCAGATGAAGGCTACCCAAAGAATCATACTTCATTTGCTATTTTATGACAATGTTAATTAATATGTCTATGTCAT TTCTTTTTTGTATTGCTATTGCATACAAACGACTGGGGTTATCTTCATTTTGCTGAATTCTGCACCATACTTCAGTTCGC GAGGCTTATTCTGAACCAGTGAAGAGGGCTATTGTGGATCATCATGCTGTATGATCTGTAGATTGTGTTTTGTGCTTTAC ATTTACCTTATTTTTTTCTTCTGTAATTCATTTTGTTCCTTTTAAATTTTCAATCAACGTTACATTAGCTTTGGACTATT CAAATATAGTTTTAGCCTCATTGGGGTTTTCATTCCACTGCAGGCAGTGGCAGGTGGTCACTTGTTAAAACTTCCTTTCA ATACTATATTTGAATATCTTCAGGTAAGCTTTAGTTGATACTTGTAAGTTCCATTTAATGCAACAAATAACGTAATCTAT TGTATAGTGTCTGGTCTCTTTCTCTGTTAGTGTGGGTGCCAACCAGCAATCAACCATAGAGTTGGATGAAATTATTGTTT TTCTATTTTCATGTGTTCAACTGATTGCAGATTGAGCTGCTTCTTGTTGCATTTTAAATTTTAGTTGTAGAAGTTTAATC AATAGATTTCTCAGTGCTAATTAGTCACTGCTAATTGCCTTTGTTTTTGCAGATGTTACAATTGATTGCAATGTCAATGA GGTGTGTCGGCCCCCTTGCAATGTTCTATCTTGCTGCTGCAGTTTCTGATTATTATGTTCCTTGGAAGGAAATGGTATAA AATGATGAGTTAATTCTTTATTCTATGAAAGTTTTGATGCCATATGGCTTCAATGTTGGTTAAACTGTTTTTATAAATGT TTAAGGGACAAGGGATTTGGATCCCCTCATGTGTTAATTTCACATGTCCATGTCATGTGAAAGATCTGGACCTTTAATTA CTTTTTTTAATGAAATCTGATGGTCAGTATTATTTCTCACACAATTTTAATTTTCTCTCTCCATATATCTATTAAGGGCC CAGATTTCATTAAAATAGAACTAAAGGCTGGGATATTCACATGACCATGTCATGTGAGATTAACACATGAGGGTATCCAA ATCCTTTAGAGAAATTTCCTGTAGCTTCATGTGTAAACATAGGGAATGTCACACAACTTCACTTCTGTCTCAGTATCCAT ACTACACTTGTAGTTACTCTTGTGAAGCATAACTTGCTCTATCAAATGATTTAATAAAGCCATTCTAGATGCTGTTGGAT CCTTTAACATATACCAGAAATTTTGGAACTTTTAAATCTCTCTTGGCATTAGAATGGCAATTGACAAGTACAGTAGAGAG ACGTCAAGATCCGCTGAGGAAAAATCAAACTTATTTTTGTATGGTCTATTGTTAACATAAAACTTGCTCTGTAATGCTAG GTTTGAATTATAACATTTCAATGATGGGATATACTTGGCAGTGTCATCTTGTTACATGTTGATCTTGCAGGTAGAGCACA AAATTCAGTCAGGATCTCATCTCTTGGACGTGAAACTAGTTCAAGTACCAAAGATGTTGTCAGTCCTTAGGAAAGATTGG GCTCCTCTTGCTTTCTGCGTATCTTTCAAGGTATTGACGGTATTTGGAGAAAAAAATTAAGGTGCAAAAACCAATTATTT TTTCCCTTTTATAAAAAACAATAAGGACCTTTACCATTTTTACAAACACTAAATTGCAATTATTACTAATTAACATATCA AAATTGTCTTGTAATGGGAAGTTGGAATGTTTTGCTCAAAGAACATGGGTGAAAATACATTTACTCTAACTCTACATGTG AAGATTCCTTTTATATCGGCATGTGTCCTTTGCGCAGTTATAGAAGAATAGACTATTTTTCTTAAGGAACTGCGTTATCC ATGTTTTCCATTAAAGTATATTAGACAGAAAATGAACTGTTCGAGTCTGAAATAGCATCCCATGTGAGAGGATCAAAACA CCACTTGGTAGTGATAATGGATCTAGTATTCAAGTCAGCAAGGGTACTTTTTTGTTTTCCAATAACAGGCATCCAAACGT AGTATGACATGACATTGAGTATGTTTGAATATTAAGTGTGTTTGAATACTAAATTCATAATAAGAGTTCCGCCAACTTTT TGTCTTGAAGCATGTGCTATGTCCGTTTGCACTTTGCACTGATGCCAATGGATATCTAAACATAACCTAAAAAAGTCCGT TTATGCACATTGGGATGGCAATCTTGCTTTCCAAAATCAATTACGCTGAAGGAAATTATGAGTTCTGTTTATGTGAAACA GAAATTAACTCATACACAAACATACACTCAAATACCATGACACATTATAACTGTTGGCTGAGATTTACCTTACCTCCTTG ATTACCAGTTGGAGACAGATTCAAGCATTCTTCTGACTAAGGCCGGTACAGCTCTTGAAAAATACAAGATGCATGCAGTT GTTGCAAATGAACTCTCAACTCGCAAGGAGCAAGTGGTAGTTGTCACTGGTGCTGAGAAGATCAAGGTTCAGCGAGATAA GAGCATGTCTGTTAATGATGTAGAGGATCCCCTGATCAACCTTCTTTCGGAAAGACATGGACCTTACATTGAGGCTTCTG CCATGTGAGTCTACAGAATGACTTTGGCTCTAAACCTTGGCTTCTTCTCCTTGTTGCGATTCCTGGGCACCTGCACCACA ACCTTGGTTGCATGAACTCCTCGGTTCTTTATTAAGTATTGTTTAAGCACATATATATATCAAGGAAGAGCAGTGCTATA TGAGAGAAATGTATCTGAGACAAAAAGTACAAACCACACATGTTTCAATTTTCTAATAAGAAAATTTTGGTTTTAAAGGA AAATATAGGATTTTTTCATAGTTTAGCCAATTGAGCTGTTTCATGTACCAATGGTGCCCACTAATATCATGCTACAAATG ATCTCTGATAATGA
CDS sequence (LotjaGi1g1v0248600.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGATGCAGAGAACGGATTGAAAGATCAGGGGCAAACCCTTGAAGCACAAGTCCAAGCCTTTTTTGACTCTGCTCCTCC TTTGCGGAACATTCATGAAATAACTGAGAAATTAAATCAATTCATTCACCGGAATTCTTCACCAGCAAATGGGGAACCCA GGAGAATTGTTTGTGTGACTTCTGGTGGTACCACTGCTCCATTGGAGCAACGTTGCGTTCGCTATGTTGACAACTTCAGT TCAGGTCATAGAGGGGCCACATCCACCGAGTATTTTTTGAAGGCTGGATACGCTGTTATCTTTCTGTGCCGGAGGGGAAG TTTCCAGCCATTTTGCAGATCCCTTCCTGATGATCCCTTAATTGAATGCTTTGAGCCCACCACCAATGAGTTAAACATTC AAGTTCGCGAGGCTTATTCTGAACCAGTGAAGAGGGCTATTGTGGATCATCATGCTGCAGTGGCAGGTGGTCACTTGTTA AAACTTCCTTTCAATACTATATTTGAATATCTTCAGATGTTACAATTGATTGCAATGTCAATGAGGTGTGTCGGCCCCCT TGCAATGTTCTATCTTGCTGCTGCAGTTTCTGATTATTATGTTCCTTGGAAGGAAATGGTAGAGCACAAAATTCAGTCAG GATCTCATCTCTTGGACGTGAAACTAGTTCAAGTACCAAAGATGTTGTCAGTCCTTAGGAAAGATTGGGCTCCTCTTGCT TTCTGCGTATCTTTCAAGTTGGAGACAGATTCAAGCATTCTTCTGACTAAGGCCGGTACAGCTCTTGAAAAATACAAGAT GCATGCAGTTGTTGCAAATGAACTCTCAACTCGCAAGGAGCAAGTGGTAGTTGTCACTGGTGCTGAGAAGATCAAGGTTC AGCGAGATAAGAGCATGTCTGTTAATGATGTAGAGGATCCCCTGATCAACCTTCTTTCGGAAAGACATGGACCTTACATT GAGGCTTCTGCCATGTGA
Protein sequence (LotjaGi1g1v0248600.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MDAENGLKDQGQTLEAQVQAFFDSAPPLRNIHEITEKLNQFIHRNSSPANGEPRRIVCVTSGGTTAPLEQRCVRYVDNFS SGHRGATSTEYFLKAGYAVIFLCRRGSFQPFCRSLPDDPLIECFEPTTNELNIQVREAYSEPVKRAIVDHHAAVAGGHLL KLPFNTIFEYLQMLQLIAMSMRCVGPLAMFYLAAAVSDYYVPWKEMVEHKIQSGSHLLDVKLVQVPKMLSVLRKDWAPLA FCVSFKLETDSSILLTKAGTALEKYKMHAVVANELSTRKEQVVVVTGAEKIKVQRDKSMSVNDVEDPLINLLSERHGPYI EASAM
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 7 | 321 | 315 | 2.2E-133 | – | |
| PANTHER | 7 | 321 | 315 | 2.2E-133 | – | |
| Gene3D | 34 | 324 | 291 | 2.4E-103 | ||
| SUPERFAMILY | 39 | 319 | 281 | 3.01E-69 | ||
| Pfam | 173 | 280 | 108 | 1.1E-11 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi1g1v0248600.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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