Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0262300 |
| Transcript ID | LotjaGi1g1v0262300.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Delta-aminolevulinic acid dehydratase; TAIR: AT1G69740.1 Aldolase superfamily protein; Swiss-Prot: sp|P43210|HEM2_SOYBN Delta-aminolevulinic acid dehydratase, chloroplastic; TrEMBL-Plants: tr|A0A0R0KHB4|A0A0R0KHB4_SOYBN Delta-aminolevulinic acid dehydratase; Found in the gene: LotjaGi1g1v0262300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:64229145..64235517) extracted from Lotus japonicus Gifu genome v1.2.
CTCTCCTCCCATTGGTTCTCTATATTCTTTCTCTCCCTCAAACTCATCACATATTCAACCCCTCCACCAACCTCTCTCTC TTCTCCCCCATCAAACCAAAAACCTCTGCTTTCCAGTTGCTACTTCAAATCCATGGCTTCAACAATCTCCAACGCCCCCT GCACGCTCAACACCCAAACCTACGTTGCTCTCAGACCACCGCACGGGACTCCAAACTTCGCTTCTCCCCGCCCTCCGCGC CTCTTCGCCGTCAGGGCCAGTGACTCCGATTGTGAAGCCGCCGTAGTCGCCGGAAGAGTGCCGGATGCCCCTCCTGTTCC GCCCAAGCCCGCCGCCCCAGCTGGAACCCCTGTGGTCCCTCCACTTGTAACATTCTTTACCCCTTAGCACAAATCAAACG TTGTCATTGCGTGATTACTTAGTTTTTGTTGATTTCAATGATTTTGTATCAGCCACTTCACCGGCGTCCTCGTCGGAATC GAAGGACACCGGCACTTCGATCAGCTTTTCAGGAAACAACCATTTCACCTGGGCATTTTGTGTATCCCTTATTCATACAT GAAGGTTGGACTTTTGTGGTGATTATTCACATCACATACATTGTTCATTTGTGGGGTGTGTGGTGTGCTTATGATGATTT CAACTTGCAGGTGAGGAAGACACACCAATTGGGGCTATGCCTGGATGCTACAGGCTTGGTTGGAGACATGGACTTGTGCA AGAGGTTTCTATTTGCACAGCTTAAATTGAGTCTCATATCATATATGTCATTTGTCTGAATAATTGGCACCCTCATGCTT CATTCTTGTGTTTTTTATCTTAATTTTAAGAACTAGGAAAATTATAGAGGGATTTGATTGTGTGGCATATGTAGTGGAAT GCATCACCAGTTATCATGACCAACCCATTCAAAAATAGTAGTGAACTGGGGGTGAAGGATGTCTATTAGTGTAAGACAAG CATGTTTGAATGGAAGAATCTATAGACTTTCTTTTGCATAATTGTTTCCAATGCTTCTTCTTTCAAACTCTATATTTCTA TGTCAAGCCACTTCTATGATAAACAAGATAAAATATCCTTATCTACTTCTATGGATTAGTTTCGTTGTTTTAAGTATTTA AGCTACTTATTAGAAGTTTGATGCTGTTTCAATTTGGTCAAGGAGTTTCGACAGATTCAATTGTTCTTTTAGATATCTGC CTTGTTTGAATCATGCCACATTGTTAAGAAGTCTCACATTGACTAGAGATATGGCCAAAATAGTCTTTATAAAGGGTAGA GCAACCCTAATACCTAAGCTAGCTTTGGGGGTAGAGTTACGCCTTAACCAAATCCTAAGATGGTATCAAAGTCTATCATA GATCTGTTTATTGGAAACTACCCATGTGTGAGCCACCCGCAAATGTTCATTCTTGCAAATTCCATTCTCTAGATGGTCCA GCCCTGAGCGTGAGGGGGTGTGTTGAGAAGTCCTATATTGACTAGGGATATGGCCAAAATAGTCCTTATAAAGCGTAGAA TAACTCTCACTCGGTCACTCCTAAGCTAGCTTTTTGGGTAGAGTTGGGCCTAACCCAAATTCTAAAGACTGGGAAGTTAG CAGGTTTCGTTTTGCTATTTTTTCCCCACACCGAATCTGCTAATACATTGCTTGTTTTCTTTTGAATAAACTTTTTCTTA TTAGTGTCATAACTAATGATACACTCACACTAACTCACAATCACAGTCTTTGCTTTTTATATTCCCAAATTGCATGGGTG ATGGTGACATTATTCTTTTTATACCTTGTATACTCAGTAAAATTTTAGTGGGCATTTTCTGCTTCAGGTTGCAAAGGCAC GAGATGTTGGTGTTAATAGTGTTGTCCTCTTCCCCAAAATTCCAGATGCTTTGAAGGTGCTTTTCTCTCTGCTACATACC ATAAGTTTTTCATAGGATAACTGCAACGTTGTATAACGGGTTTCCTCCTTTAGACTCCTACCGGAGATGAAGCATACAGT GAGAATGGCTTAGTGCCTCGAGCAATACGTTTGCTCAAGGATAAGTACCCTGACCTTGTAAGTGAGCATAAGTTCTTCTT TAGTTTGAGAATATTATATATTTTCTGGTGCCTGTAGAAAGCTAAGCCAATATCCTTTGTCTTTTAATCTTTCTTCAGGT TATCTATACAGACGTTGCATTAGATCCTTATTCATCAGATGGCCATGATGGCATAGTTAGAGAAGATGGTAAGCTATCGA ATTTATCTTTTGTACTCTATAGCTGGTAATCTTATGAAAAAGATGTAAAAGTATAGTTGTCTTAAGTTAATTATTTTTTT AGTTAATCTTTTTTATTATTGAAGATGACCCAATGGGTTAATAATTTAAAAATGTGTAGGCAGACACTGAATAAAATGCA CCATTCCCCTTGGCCCATGTTTTAGGCACAACCTGACACCTTGAAAGTAATAAAACATTTTACATTTGGTTGTGTCACCA TGTGCATGTCCATTTCCACCTTGTATTACAGCATGTTTGACTCCACATTCCCCTCCCCCCCGAATCATTTCTCCCTCTAC TGAAGCTACACCCAGTAGCTTCTTTCCCACTGCAGTGTGCAGGATGGATGGGGAAAGCCATCGACAATCCAAACACCCAC TTAGCAGATTAATCGCTTGAAAATTTCTCAGTTCACATTTTGCTTTGGTTCCTTTGACTTAGCTGAAAGTAAGGAATGCA AGAAGAGTATAACTTTCTATTTTGTTATATGAATCACCATCTTATGGTACTACAGGGTATTTTATTCTGAATCACCAGGA GTAGGAACAGGAATAGGAATTTCTATGGATGTAATAGTCATTCATGTTCAATATTTGGTTCATCCAGAGAGAAAAATCTA TTTTATTCCCTTCTGATTTCATGTTTGGTGTTTAGAATTAATATGGAATGGAAATATACCCAACAACCAAACCTGTTCAT GTTTGGAATTAATGTACAAGGTAACAATAACAAGGAATTCTTTTTTTATGTATATGGCAATATCTTATGCTGTGGAATCA AGACTCATGGCTTTTTCCATACTAAACAAAGGAATACTCATACGAGTCGAGCCCATGAAATAGAGGCTGGAATGGAATCA CTCCTCTCCCTTTTTACGTATGTTATTGGCTTTGGAGTTTATATTAAGATAATGGAACTTATAAGTCATGCCAATAACAG TTTTCTAGCACTGGTTGTACTTACTGAATATGTTCTTGAGTGTGTTTATCTTTGCTATTAGTCCAGCAGAAAATTATTCA AAAAAAATGCCAGCAATTAAATTGTGGCTCTATCTACTTCCTGTATCAACTTCGATGAGTAAAATATAGAGACTATGTGA TGTGATTTGAACTATTCTTGAAGGAAGTAGTCTTTCTTGATTATAGACAATAAAGAACTAATTACAAGTTATATTCTTGA TATCGTGTAGGAGTTATTATGAATGACGAGACAGTTCATCAGCTTTGTAAACAAGCTGTAGCCCAGGTAATATGACATGT GTAGTATGTACATTTTTCAACCATATACAGTTTACCAATTATTTTCTTTGGACTTCCTGAGCGAGTTGGTCACCTCCAGT TAGGCCTCCAACTGTTCATTTGTCTTCACATAAATTTCTCTCGTTTATAGATGTGATTTGATTCATGTAATGGGGTTTAC CCTTTACAGAGTGCTCAACTCTGATAAAAGTAAAATAAATGAGGAAGAATCAAATACCAAATGGTAGTTATGAGCAAGTA ATCTACTTTTGGGGAGGTTAAAGATTATACATTGTTAATTGATGACATCATCTTATCAGTCATTTTACCTTCTAAGTTTT CCTTGCTACTCTTCTTTGACCTCACTTAACATCATTATTTTGTCTTATTTTTTTTCGAAAGGCCCGAGCTGGAGCAGATG TTGTCAGTCCTAGTGATATGATGGATGGTCGGGTAGGAGCAATAAGAGCGGCTCTTGATGCTGAAGGCTTTCAGCATGTT TCTATAATGTCATATACAGCAAAGTAATGGCCATTTCTTTTTTCTTTTCTTATTTTCTGTGGATGCTAACATGCACTGGA AATTAGTGAAGATTATGTCAGTTATAGAGATGGGATACATGCATCCAAAGTTTAGAAATAACATCAGTGAAAAGAAAAGG AAATTATTTGAAAATTGAAATTGACAATTACTAAGGTTGGGGAATCATTTTTCCAATCATCGTGTATAGCTTGCAAGATT GTGTTCATGAAATATCTTGACTTAGTATCTATCGGTACCTATGTTGCAGCATGGGGTATCAATTATTCAAAATTTGTGGC ATCTTGATTATTTTTTCAAGTGTAGCAGTTCCATTATGCACAAGTTGATTTCTCTCAAATGCAACTTATAAGCAATTTTA TCTTCCTTACTGCCATAGTCGCTCACTACTCACTAGCATTCAAATTCGTTCCGATATGCATCTTATTGCTACCATGAACC ATCTCACTATTTTTGCTAATTGTAAGCCCCCTACTCATTGTTTCTGAGATTACTCATTGGTAAACCAATTCTATATAAAT AGAAATTATACCTAACAAGATCAGTTGGTGGATGCTGTTAATATTTTCATGTACCTTTTTTTGTGTGGCATTTAACTTAC AATGTTAAACTACACCATTTATATTTTGACAATAGGTATGCAAGTTCATTTTATGGCCCATTTAGAGAAGCACTGGACTC AAACCCCCGGTTTGGAGACAAAAAGACGTATGTGTTAACTTGAAATTAGACTTACTATCATATATTTAATTTAATCAATT TTACATTATTGATTCTCACTTGTAAATTCTTGCATGGCTGAAACAAAGTTATCAGATGAACCCAGCAAATTACAGAGAGG CTCTGACAGAGATGCGAGAAGATGAATCTGAAGGAGCTGATATTCTCTTGGTTGGTTTAGCTTTATCTCTGTGTTGATCA TGGTTGAGAATGAATTTCATCTCATGCTCTTTTTTAAATTCTATCTCTACTCAAACTATAGAAAAATTGGATTTGCAGGT GAAGCCAGCTCTTCCTTATTTGGATGTCATAAGGCTGCTCAGGGATAATTCTCCTTTGCCAATTGCAGCATACCAGGTTT TTCTCTGGCCCATTCTAGCAATAGGAAAAAATTTCTGAAGAAAAGATGATCAAATATTCAATGAATTTCAATCAGTGAAG GCTGGATTAACTTTTATTAGTAACAGAAGTCTATCATTAGTAATAAAAAACTCACACCTAATTTTATATCAGGCTTGCAC ACAAGTTATATGGTTGCTTTAACAGTTATTGTTCTTGTTCTCTTATGCTATTACATAATACATATCAAATTCTAATCCAA TTCTTTTAAAGAGTGATTGAATGGAAATTTGTTTGTGAAATGATCATTATATCTGTGCTCTTCTTTGATTCTTGCAATTT GGGAGTATTAACTCCATTTTCTGTTAGTGAAATTTGTAACTGTCAATAGTAATGAAAAGAAACTTGGCGAATACAAAGTT GATGACAAGGATATAAAGTTTGAAGAAATTTGATTGATATGTAAGTTTAGTAGTTTATTACTTTATTTAGAACACTTTTA GCAGTTGTAAACTTCTGCATTCTGTGTTCTAAAAGGATTCCTCAACTTATGCTTCCTCTTCTCTAGCCCATACACTTTAT ATCGTAAATTGCTATGCCTTTATAGCTGGAATACAAGAATACCTTGCATGTTGTTTATGTGAATGAGAAGATATAGTTCT AAATAGTTTGAAAACATGTTTCACATTATTATTCCCCCTCCCTGTTTTTTTTCTTCATATACCTTATAAATTCATGGAAC AGGTTTCTGGTGAATACTCGATGATCAAAGCTGGTGGTGCTCTTAAAATGATTGATGAAGAAAAGGTTATGATGGAGTCA CTATTATGCCTCCGTCGGGCTGGTGCTGATGTCATCCTTACTTATTTTGCTCTTCAAGCGGCCAGATCTTTGTGTGGAGA GAAGAGGTGAGATTGTTCACATATTTAGGGCATTGTTCATTGTAGCAAGCCGAAGAGCTCAAAGAACTAGCCAGTCTGTA GGGTTTGAAAATCATACTTGTGAACCCTCAAATTAAACTTGATCCTTATTTTCATATTTATTTTTGATACCTTAGAACAA TGAGGATTGTATTAAGATTTCAAATGAGAGCTTTGGGCCATTTAAGCCCATTTAGTGAATAAAGAATGTGACATTGAAAA TAAAAAATTGACCACCAGTGCTCAATTCAGATTGTTCAAAAGGAATAAAAAGTAATAAGTGGAGGTCATTGGAATGAGAT GCAAAAATAATCATCGACTTGTAAAAGTTTTTATGTACAAAATTTGAAATAAC
CDS sequence (LotjaGi1g1v0262300.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCTTCAACAATCTCCAACGCCCCCTGCACGCTCAACACCCAAACCTACGTTGCTCTCAGACCACCGCACGGGACTCC AAACTTCGCTTCTCCCCGCCCTCCGCGCCTCTTCGCCGTCAGGGCCAGTGACTCCGATTGTGAAGCCGCCGTAGTCGCCG GAAGAGTGCCGGATGCCCCTCCTGTTCCGCCCAAGCCCGCCGCCCCAGCTGGAACCCCTGTGGTCCCTCCACTTCCACTT CACCGGCGTCCTCGTCGGAATCGAAGGACACCGGCACTTCGATCAGCTTTTCAGGAAACAACCATTTCACCTGGGCATTT TGTGTATCCCTTATTCATACATGAAGGTGAGGAAGACACACCAATTGGGGCTATGCCTGGATGCTACAGGCTTGGTTGGA GACATGGACTTGTGCAAGAGGTTGCAAAGGCACGAGATGTTGGTGTTAATAGTGTTGTCCTCTTCCCCAAAATTCCAGAT GCTTTGAAGACTCCTACCGGAGATGAAGCATACAGTGAGAATGGCTTAGTGCCTCGAGCAATACGTTTGCTCAAGGATAA GTACCCTGACCTTGTTATCTATACAGACGTTGCATTAGATCCTTATTCATCAGATGGCCATGATGGCATAGTTAGAGAAG ATGGAGTTATTATGAATGACGAGACAGTTCATCAGCTTTGTAAACAAGCTGTAGCCCAGGCCCGAGCTGGAGCAGATGTT GTCAGTCCTAGTGATATGATGGATGGTCGGGTAGGAGCAATAAGAGCGGCTCTTGATGCTGAAGGCTTTCAGCATGTTTC TATAATGTCATATACAGCAAAGTATGCAAGTTCATTTTATGGCCCATTTAGAGAAGCACTGGACTCAAACCCCCGGTTTG GAGACAAAAAGACTTATCAGATGAACCCAGCAAATTACAGAGAGGCTCTGACAGAGATGCGAGAAGATGAATCTGAAGGA GCTGATATTCTCTTGGTGAAGCCAGCTCTTCCTTATTTGGATGTCATAAGGCTGCTCAGGGATAATTCTCCTTTGCCAAT TGCAGCATACCAGGTTTCTGGTGAATACTCGATGATCAAAGCTGGTGGTGCTCTTAAAATGATTGATGAAGAAAAGGTTA TGATGGAGTCACTATTATGCCTCCGTCGGGCTGGTGCTGATGTCATCCTTACTTATTTTGCTCTTCAAGCGGCCAGATCT TTGTGTGGAGAGAAGAGGTGA
Protein sequence (LotjaGi1g1v0262300.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MASTISNAPCTLNTQTYVALRPPHGTPNFASPRPPRLFAVRASDSDCEAAVVAGRVPDAPPVPPKPAAPAGTPVVPPLPL HRRPRRNRRTPALRSAFQETTISPGHFVYPLFIHEGEEDTPIGAMPGCYRLGWRHGLVQEVAKARDVGVNSVVLFPKIPD ALKTPTGDEAYSENGLVPRAIRLLKDKYPDLVIYTDVALDPYSSDGHDGIVREDGVIMNDETVHQLCKQAVAQARAGADV VSPSDMMDGRVGAIRAALDAEGFQHVSIMSYTAKYASSFYGPFREALDSNPRFGDKKTYQMNPANYREALTEMREDESEG ADILLVKPALPYLDVIRLLRDNSPLPIAAYQVSGEYSMIKAGGALKMIDEEKVMMESLLCLRRAGADVILTYFALQAARS LCGEKR
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 58 | 89 | 32 | - | – | |
| PANTHER | 58 | 405 | 348 | 5.4E-173 | – | |
| MobiDBLite | 58 | 80 | 23 | - | – | |
| PANTHER | 58 | 405 | 348 | 5.4E-173 | ||
| Gene3D | 72 | 406 | 335 | 6.5E-152 | ||
| SUPERFAMILY | 76 | 401 | 326 | 3.81E-133 | – | |
| SMART | 79 | 401 | 323 | 7.2E-211 | ||
| Pfam | 82 | 399 | 318 | 6.5E-134 | ||
| CDD | 90 | 402 | 313 | 0.0 | – | |
| PRINTS | 199 | 213 | 15 | 5.5E-60 | ||
| PRINTS | 230 | 249 | 20 | 5.5E-60 | ||
| PRINTS | 268 | 287 | 20 | 5.5E-60 | ||
| PRINTS | 320 | 336 | 17 | 5.5E-60 | ||
| ProSitePatterns | 320 | 332 | 13 | - | ||
| PRINTS | 345 | 360 | 16 | 5.5E-60 | ||
| PRINTS | 375 | 394 | 20 | 5.5E-60 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Catalytic activity | Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic. | ||
| Molecular function | Porphobilinogen synthase activity | Catalysis of the reaction: 2 5-aminolevulinate = 2 H(2)O + H(+) + porphobilinogen. | ||
| Biological process | Tetrapyrrole biosynthetic process | The chemical reactions and pathways leading to the formation of tetrapyrroles, natural pigments containing four pyrrole rings joined by one-carbon units linking position 2 of one pyrrole ring to position 5 of the next. | ||
| Molecular function | Metal ion binding | Interacting selectively and non-covalently with any metal ion. |
Expression pattern of LotjaGi1g1v0262300.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…