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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0262300 |
| Transcript ID | LotjaGi1g1v0262300.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Delta-aminolevulinic acid dehydratase; TAIR: AT1G69740.1 Aldolase superfamily protein; Swiss-Prot: sp|P43210|HEM2_SOYBN Delta-aminolevulinic acid dehydratase, chloroplastic; TrEMBL-Plants: tr|A0A0R0KHB4|A0A0R0KHB4_SOYBN Delta-aminolevulinic acid dehydratase; Found in the gene: LotjaGi1g1v0262300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:64229161..64235154) extracted from Lotus japonicus Gifu genome v1.2.
TCTCTATATTCTTTCTCTCCCTCAAACTCATCACATATTCAACCCCTCCACCAACCTCTCTCTCTTCTCCCCCATCAAAC CAAAAACCTCTGCTTTCCAGTTGCTACTTCAAATCCATGGCTTCAACAATCTCCAACGCCCCCTGCACGCTCAACACCCA AACCTACGTTGCTCTCAGACCACCGCACGGGACTCCAAACTTCGCTTCTCCCCGCCCTCCGCGCCTCTTCGCCGTCAGGG CCAGTGACTCCGATTGTGAAGCCGCCGTAGTCGCCGGAAGAGTGCCGGATGCCCCTCCTGTTCCGCCCAAGCCCGCCGCC CCAGCTGGAACCCCTGTGGTCCCTCCACTTGTAACATTCTTTACCCCTTAGCACAAATCAAACGTTGTCATTGCGTGATT ACTTAGTTTTTGTTGATTTCAATGATTTTGTATCAGCCACTTCACCGGCGTCCTCGTCGGAATCGAAGGACACCGGCACT TCGATCAGCTTTTCAGGAAACAACCATTTCACCTGGGCATTTTGTGTATCCCTTATTCATACATGAAGGTTGGACTTTTG TGGTGATTATTCACATCACATACATTGTTCATTTGTGGGGTGTGTGGTGTGCTTATGATGATTTCAACTTGCAGGTGAGG AAGACACACCAATTGGGGCTATGCCTGGATGCTACAGGCTTGGTTGGAGACATGGACTTGTGCAAGAGGTTTCTATTTGC ACAGCTTAAATTGAGTCTCATATCATATATGTCATTTGTCTGAATAATTGGCACCCTCATGCTTCATTCTTGTGTTTTTT ATCTTAATTTTAAGAACTAGGAAAATTATAGAGGGATTTGATTGTGTGGCATATGTAGTGGAATGCATCACCAGTTATCA TGACCAACCCATTCAAAAATAGTAGTGAACTGGGGGTGAAGGATGTCTATTAGTGTAAGACAAGCATGTTTGAATGGAAG AATCTATAGACTTTCTTTTGCATAATTGTTTCCAATGCTTCTTCTTTCAAACTCTATATTTCTATGTCAAGCCACTTCTA TGATAAACAAGATAAAATATCCTTATCTACTTCTATGGATTAGTTTCGTTGTTTTAAGTATTTAAGCTACTTATTAGAAG TTTGATGCTGTTTCAATTTGGTCAAGGAGTTTCGACAGATTCAATTGTTCTTTTAGATATCTGCCTTGTTTGAATCATGC CACATTGTTAAGAAGTCTCACATTGACTAGAGATATGGCCAAAATAGTCTTTATAAAGGGTAGAGCAACCCTAATACCTA AGCTAGCTTTGGGGGTAGAGTTACGCCTTAACCAAATCCTAAGATGGTATCAAAGTCTATCATAGATCTGTTTATTGGAA ACTACCCATGTGTGAGCCACCCGCAAATGTTCATTCTTGCAAATTCCATTCTCTAGATGGTCCAGCCCTGAGCGTGAGGG GGTGTGTTGAGAAGTCCTATATTGACTAGGGATATGGCCAAAATAGTCCTTATAAAGCGTAGAATAACTCTCACTCGGTC ACTCCTAAGCTAGCTTTTTGGGTAGAGTTGGGCCTAACCCAAATTCTAAAGACTGGGAAGTTAGCAGGTTTCGTTTTGCT ATTTTTTCCCCACACCGAATCTGCTAATACATTGCTTGTTTTCTTTTGAATAAACTTTTTCTTATTAGTGTCATAACTAA TGATACACTCACACTAACTCACAATCACAGTCTTTGCTTTTTATATTCCCAAATTGCATGGGTGATGGTGACATTATTCT TTTTATACCTTGTATACTCAGTAAAATTTTAGTGGGCATTTTCTGCTTCAGGTTGCAAAGGCACGAGATGTTGGTGTTAA TAGTGTTGTCCTCTTCCCCAAAATTCCAGATGCTTTGAAGGTGCTTTTCTCTCTGCTACATACCATAAGTTTTTCATAGG ATAACTGCAACGTTGTATAACGGGTTTCCTCCTTTAGACTCCTACCGGAGATGAAGCATACAGTGAGAATGGCTTAGTGC CTCGAGCAATACGTTTGCTCAAGGATAAGTACCCTGACCTTGTAAGTGAGCATAAGTTCTTCTTTAGTTTGAGAATATTA TATATTTTCTGGTGCCTGTAGAAAGCTAAGCCAATATCCTTTGTCTTTTAATCTTTCTTCAGGTTATCTATACAGACGTT GCATTAGATCCTTATTCATCAGATGGCCATGATGGCATAGTTAGAGAAGATGGTAAGCTATCGAATTTATCTTTTGTACT CTATAGCTGGTAATCTTATGAAAAAGATGTAAAAGTATAGTTGTCTTAAGTTAATTATTTTTTTAGTTAATCTTTTTTAT TATTGAAGATGACCCAATGGGTTAATAATTTAAAAATGTGTAGGCAGACACTGAATAAAATGCACCATTCCCCTTGGCCC ATGTTTTAGGCACAACCTGACACCTTGAAAGTAATAAAACATTTTACATTTGGTTGTGTCACCATGTGCATGTCCATTTC CACCTTGTATTACAGCATGTTTGACTCCACATTCCCCTCCCCCCCGAATCATTTCTCCCTCTACTGAAGCTACACCCAGT AGCTTCTTTCCCACTGCAGTGTGCAGGATGGATGGGGAAAGCCATCGACAATCCAAACACCCACTTAGCAGATTAATCGC TTGAAAATTTCTCAGTTCACATTTTGCTTTGGTTCCTTTGACTTAGCTGAAAGTAAGGAATGCAAGAAGAGTATAACTTT CTATTTTGTTATATGAATCACCATCTTATGGTACTACAGGGTATTTTATTCTGAATCACCAGGAGTAGGAACAGGAATAG GAATTTCTATGGATGTAATAGTCATTCATGTTCAATATTTGGTTCATCCAGAGAGAAAAATCTATTTTATTCCCTTCTGA TTTCATGTTTGGTGTTTAGAATTAATATGGAATGGAAATATACCCAACAACCAAACCTGTTCATGTTTGGAATTAATGTA CAAGGTAACAATAACAAGGAATTCTTTTTTTATGTATATGGCAATATCTTATGCTGTGGAATCAAGACTCATGGCTTTTT CCATACTAAACAAAGGAATACTCATACGAGTCGAGCCCATGAAATAGAGGCTGGAATGGAATCACTCCTCTCCCTTTTTA CGTATGTTATTGGCTTTGGAGTTTATATTAAGATAATGGAACTTATAAGTCATGCCAATAACAGTTTTCTAGCACTGGTT GTACTTACTGAATATGTTCTTGAGTGTGTTTATCTTTGCTATTAGTCCAGCAGAAAATTATTCAAAAAAAATGCCAGCAA TTAAATTGTGGCTCTATCTACTTCCTGTATCAACTTCGATGAGTAAAATATAGAGACTATGTGATGTGATTTGAACTATT CTTGAAGGAAGTAGTCTTTCTTGATTATAGACAATAAAGAACTAATTACAAGTTATATTCTTGATATCGTGTAGGAGTTA TTATGAATGACGAGACAGTTCATCAGCTTTGTAAACAAGCTGTAGCCCAGGTAATATGACATGTGTAGTATGTACATTTT TCAACCATATACAGTTTACCAATTATTTTCTTTGGACTTCCTGAGCGAGTTGGTCACCTCCAGTTAGGCCTCCAACTGTT CATTTGTCTTCACATAAATTTCTCTCGTTTATAGATGTGATTTGATTCATGTAATGGGGTTTACCCTTTACAGAGTGCTC AACTCTGATAAAAGTAAAATAAATGAGGAAGAATCAAATACCAAATGGTAGTTATGAGCAAGTAATCTACTTTTGGGGAG GTTAAAGATTATACATTGTTAATTGATGACATCATCTTATCAGTCATTTTACCTTCTAAGTTTTCCTTGCTACTCTTCTT TGACCTCACTTAACATCATTATTTTGTCTTATTTTTTTTCGAAAGGCCCGAGCTGGAGCAGATGTTGTCAGTCCTAGTGA TATGATGGATGGTCGGGTAGGAGCAATAAGAGCGGCTCTTGATGCTGAAGGCTTTCAGCATGTTTCTATAATGTCATATA CAGCAAAGTAATGGCCATTTCTTTTTTCTTTTCTTATTTTCTGTGGATGCTAACATGCACTGGAAATTAGTGAAGATTAT GTCAGTTATAGAGATGGGATACATGCATCCAAAGTTTAGAAATAACATCAGTGAAAAGAAAAGGAAATTATTTGAAAATT GAAATTGACAATTACTAAGGTTGGGGAATCATTTTTCCAATCATCGTGTATAGCTTGCAAGATTGTGTTCATGAAATATC TTGACTTAGTATCTATCGGTACCTATGTTGCAGCATGGGGTATCAATTATTCAAAATTTGTGGCATCTTGATTATTTTTT CAAGTGTAGCAGTTCCATTATGCACAAGTTGATTTCTCTCAAATGCAACTTATAAGCAATTTTATCTTCCTTACTGCCAT AGTCGCTCACTACTCACTAGCATTCAAATTCGTTCCGATATGCATCTTATTGCTACCATGAACCATCTCACTATTTTTGC TAATTGTAAGCCCCCTACTCATTGTTTCTGAGATTACTCATTGGTAAACCAATTCTATATAAATAGAAATTATACCTAAC AAGATCAGTTGGTGGATGCTGTTAATATTTTCATGTACCTTTTTTTGTGTGGCATTTAACTTACAATGTTAAACTACACC ATTTATATTTTGACAATAGGTATGCAAGTTCATTTTATGGCCCATTTAGAGAAGCACTGGACTCAAACCCCCGGTTTGGA GACAAAAAGACGTATGTGTTAACTTGAAATTAGACTTACTATCATATATTTAATTTAATCAATTTTACATTATTGATTCT CACTTGTAAATTCTTGCATGGCTGAAACAAAGTTATCAGATGAACCCAGCAAATTACAGAGAGGCTCTGACAGAGATGCG AGAAGATGAATCTGAAGGAGCTGATATTCTCTTGGTTGGTTTAGCTTTATCTCTGTGTTGATCATGGTTGAGAATGAATT TCATCTCATGCTCTTTTTTAAATTCTATCTCTACTCAAACTATAGAAAAATTGGATTTGCAGGTGAAGCCAGCTCTTCCT TATTTGGATGTCATAAGGCTGCTCAGGGATAATTCTCCTTTGCCAATTGCAGCATACCAGGTTTTTCTCTGGCCCATTCT AGCAATAGGAAAAAATTTCTGAAGAAAAGATGATCAAATATTCAATGAATTTCAATCAGTGAAGGCTGGATTAACTTTTA TTAGTAACAGAAGTCTATCATTAGTAATAAAAAACTCACACCTAATTTTATATCAGGCTTGCACACAAGTTATATGGTTG CTTTAACAGTTATTGTTCTTGTTCTCTTATGCTATTACATAATACATATCAAATTCTAATCCAATTCTTTTAAAGAGTGA TTGAATGGAAATTTGTTTGTGAAATGATCATTATATCTGTGCTCTTCTTTGATTCTTGCAATTTGGGAGTATTAACTCCA TTTTCTGTTAGTGAAATTTGTAACTGTCAATAGTAATGAAAAGAAACTTGGCGAATACAAAGTTGATGACAAGGATATAA AGTTTGAAGAAATTTGATTGATATGTAAGTTTAGTAGTTTATTACTTTATTTAGAACACTTTTAGCAGTTGTAAACTTCT GCATTCTGTGTTCTAAAAGGATTCCTCAACTTATGCTTCCTCTTCTCTAGCCCATACACTTTATATCGTAAATTGCTATG CCTTTATAGCTGGAATACAAGAATACCTTGCATGTTGTTTATGTGAATGAGAAGATATAGTTCTAAATAGTTTGAAAACA TGTTTCACATTATTATTCCCCCTCCCTGTTTTTTTTCTTCATATACCTTATAAATTCATGGAACAGGTTTCTGGTGAATA CTCGATGATCAAAGCTGGTGGTGCTCTTAAAATGATTGATGAAGAAAAGGTTATGATGGAGTCACTATTATGCCTCCGTC GGGCTGGTGCTGATGTCATCCTTACTTATTTTGCTCTTCAAGCGGCCAGATCTTTGTGTGGAGAGAAGAGGTGA
CDS sequence (LotjaGi1g1v0262300.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCTTCAACAATCTCCAACGCCCCCTGCACGCTCAACACCCAAACCTACGTTGCTCTCAGACCACCGCACGGGACTCC AAACTTCGCTTCTCCCCGCCCTCCGCGCCTCTTCGCCGTCAGGGCCAGTGACTCCGATTGTGAAGCCGCCGTAGTCGCCG GAAGAGTGCCGGATGCCCCTCCTGTTCCGCCCAAGCCCGCCGCCCCAGCTGGAACCCCTGTGGTCCCTCCACTTCCACTT CACCGGCGTCCTCGTCGGAATCGAAGGACACCGGCACTTCGATCAGCTTTTCAGGAAACAACCATTTCACCTGGGCATTT TGTGTATCCCTTATTCATACATGAAGGTGAGGAAGACACACCAATTGGGGCTATGCCTGGATGCTACAGGCTTGGTTGGA GACATGGACTTGTGCAAGAGGTTGCAAAGGCACGAGATGTTGGTGTTAATAGTGTTGTCCTCTTCCCCAAAATTCCAGAT GCTTTGAAGACTCCTACCGGAGATGAAGCATACAGTGAGAATGGCTTAGTGCCTCGAGCAATACGTTTGCTCAAGGATAA GTACCCTGACCTTGTTATCTATACAGACGTTGCATTAGATCCTTATTCATCAGATGGCCATGATGGCATAGTTAGAGAAG ATGGAGTTATTATGAATGACGAGACAGTTCATCAGCTTTGTAAACAAGCTGTAGCCCAGGCCCGAGCTGGAGCAGATGTT GTCAGTCCTAGTGATATGATGGATGGTCGGGTAGGAGCAATAAGAGCGGCTCTTGATGCTGAAGGCTTTCAGCATGTTTC TATAATGTCATATACAGCAAAGTATGCAAGTTCATTTTATGGCCCATTTAGAGAAGCACTGGACTCAAACCCCCGGTTTG GAGACAAAAAGACTTATCAGATGAACCCAGCAAATTACAGAGAGGCTCTGACAGAGATGCGAGAAGATGAATCTGAAGGA GCTGATATTCTCTTGGTTTCTGGTGAATACTCGATGATCAAAGCTGGTGGTGCTCTTAAAATGATTGATGAAGAAAAGGT TATGATGGAGTCACTATTATGCCTCCGTCGGGCTGGTGCTGATGTCATCCTTACTTATTTTGCTCTTCAAGCGGCCAGAT CTTTGTGTGGAGAGAAGAGGTGA
Protein sequence (LotjaGi1g1v0262300.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MASTISNAPCTLNTQTYVALRPPHGTPNFASPRPPRLFAVRASDSDCEAAVVAGRVPDAPPVPPKPAAPAGTPVVPPLPL HRRPRRNRRTPALRSAFQETTISPGHFVYPLFIHEGEEDTPIGAMPGCYRLGWRHGLVQEVAKARDVGVNSVVLFPKIPD ALKTPTGDEAYSENGLVPRAIRLLKDKYPDLVIYTDVALDPYSSDGHDGIVREDGVIMNDETVHQLCKQAVAQARAGADV VSPSDMMDGRVGAIRAALDAEGFQHVSIMSYTAKYASSFYGPFREALDSNPRFGDKKTYQMNPANYREALTEMREDESEG ADILLVSGEYSMIKAGGALKMIDEEKVMMESLLCLRRAGADVILTYFALQAARSLCGEKR
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 58 | 89 | 32 | - | – | |
| PANTHER | 58 | 326 | 269 | 6.8E-154 | ||
| MobiDBLite | 58 | 80 | 23 | - | – | |
| PANTHER | 58 | 326 | 269 | 6.8E-154 | – | |
| Gene3D | 72 | 326 | 255 | 3.9E-112 | ||
| SUPERFAMILY | 76 | 375 | 300 | 4.83E-116 | – | |
| SMART | 79 | 375 | 297 | 1.6E-176 | ||
| Pfam | 82 | 326 | 245 | 2.9E-96 | ||
| CDD | 90 | 376 | 287 | 0.0 | – | |
| PRINTS | 199 | 213 | 15 | 1.8E-28 | ||
| PRINTS | 230 | 249 | 20 | 1.8E-28 | ||
| PRINTS | 268 | 287 | 20 | 1.8E-28 | ||
| PRINTS | 320 | 336 | 17 | 1.8E-28 | ||
| PANTHER | 326 | 379 | 54 | 6.8E-154 | ||
| PANTHER | 326 | 379 | 54 | 6.8E-154 | – | |
| Gene3D | 327 | 380 | 54 | 1.4E-15 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Catalytic activity | Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic. | ||
| Molecular function | Porphobilinogen synthase activity | Catalysis of the reaction: 2 5-aminolevulinate = 2 H(2)O + H(+) + porphobilinogen. | ||
| Biological process | Tetrapyrrole biosynthetic process | The chemical reactions and pathways leading to the formation of tetrapyrroles, natural pigments containing four pyrrole rings joined by one-carbon units linking position 2 of one pyrrole ring to position 5 of the next. | ||
| Molecular function | Metal ion binding | Interacting selectively and non-covalently with any metal ion. |
Expression pattern of LotjaGi1g1v0262300.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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