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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0265600 |
| Transcript ID | LotjaGi1g1v0265600.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Auxilin-related protein 1; TAIR: AT1G21660.1 Chaperone DnaJ-domain superfamily protein; Swiss-Prot: sp|Q9SU08|AUXI1_ARATH Auxilin-related protein 1; TrEMBL-Plants: tr|I1KAD6|I1KAD6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0265600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:64895854..64902508) extracted from Lotus japonicus Gifu genome v1.2.
CAATAATCTATGCATGAATGAAATAAATAAATAAATATTACATGGATGCACACACTCATTAAAGAAAAAGCTCTTCACAA AAAGCACAAGGCAAAATAATTGGCCACAACCGCGTCGGAGTTGGTGGTGCGTTCCACACCAGACCAGAGAGGCAGGGAAG GGAGAAAAGGGACTCAGACAGAGAAAGAGAATCAAATAAAACCAACCTCTCAATCTTCCATCCAATTTTCTCCCCTAATT TTCTTCCCTATCTTCCTTTTCCACGCGATTCCCGCCATTTTTCTTTCCTCCCATTTCCCCTCTCTCTCTCCAATTCTGCA ACAACCTCAAAAAATCTCATCAAAAATTTTCATTCACAGAACAATAATCACTAATTTTCTTCCAATTTCTACCAATTTCA ATTCAGCTCTTCTCAGCTTATCATCACTGTATCGATTCATTCCTTCAAATTCAAGAAATGGACGAGTTTGGTGTGTTGAC CGAAAGGTATGGATTGAAACCGCAAGGAAAATCGGCACCAATGGCCTCATCAAAGCGATCCAACCATGATTCGGGTTCCA ATCTTAAACCTTCCCAAAACGGATCCAGATCTCCCCAGCATTCCAATTTCGATTTTGATTTCGGCGCTTTCGCCGGCGCC GAGAAGAAAAACCAGAACAATTTTGGGGGTTTTGGTGATGGCATTGATGAGATCTTCGGTGGAAAAACTGTGAAATCGAA TGTCGGTGGCGGTGGTGGTGGTGGTTCGTTTGATTATGATTCGATTTTCGGCGGTTCAAACAAACCGGCTTCTACGTCTT CGTCAGTTTATGTGGATGATATATTCGGTGGAATGAATAATAAGCAGAGTGTTGGTGTTGATGATCTGCTTGATAAGATT GGTGGGCTGCATGCAAATACCAAAAGTTCCAATGAGAAAGGGATTGATTCTGATGAATTGATTCCTGGGTTTGGTGGAAG CAATGTTTCAAATAATGGGTATGAAACTTTGTTTTTAATCTCTGCTTTGTATTGGGAAGTTTATGCTCAATAATATACCT CACATGTGGTTTATAATTTTATTTATCGTTACAAATTAGTTCTATGATTTATGGTATGAGTTTCATAGATTTAGGTACTA GCGTGTATGCAAATACACTTTGAATTAAACTTCTTGTGAGGAATGTTTTGACGGACTAAATTGACTATTTTACTCAATTA ACTTCCTTGTAAACTGTAATGGTTTTACCTAGTAAATTAAATTGTGGCTTGAAATAGGAATCCCTTTAACTATGATGGCA ATACATTGACGGTTAATTTATTTGTGTAGAATACTCATGTACTCTTTGGAAGCTATGAGAGGTACTAGTGAAAAATAGAA AAGTTTTGTGAGTTGTGTATGAGCATTATTCTCCTGGTAAAGCTTATTGATATGTTGAAGATGCGTTATAGATGCCGGTA TATTGTGGCCTTATTTATGCTCTTGCAATTTTGGAAGGAAATATTTGGTATCGACTTGAGAGGCACGATGCTGGGCATGT TTTTTTTTTATGAAGACCATTATATAGATCTTTTCTGCCTTACGTTTCCTGGAGACTCATACTTCATTAGGTTAAATAAT TATGAATTTGGTATTAATGATGTTTATTACTTTGTAGTTACCATAATTTCTTATTTTTCCAGCCCAAGTTTTGTTTGAAC ACACAAACCCCACATTCCTATTCTGAGGATTTACAGAAATTTGGATGCATAACCTACATTTATGGACATGTTCGTTCACT GATCCTGGACTTGAATCCAGTCATTGTTCCTAATAGCTTATCTAATATTGTTCTGCAATGTCTTTGGTTATTCTTCCTAA CAAATTTCATAGTATCGTGTAATACATGTTTTCTATCTGCCAGTGATCTAATCTAAGTTTATCACTTGAATTATAGATAA AAGAATACATCTTCTCTGTCCTTTATAATTGGCAGTTGTCTTCCTTCTATTTGGTCTCATTGTATCTTAAATGTGTCAAT TTTTCAGTAAAACAGGTTTTCAGATGAATAAGCCTCATAAACCAGCTGCCACATTGAAAAGTCCTCCTGCCCCAGCTAAC AGCGATCCATTTTTGGTATTTGAAACCTCTGCAAGCACAGGAGCTTCAGATTCATTCCTGGACTCGTTGGAACATATAAG TAAGTTGAATAATTCCAAAGGTACCAGCTCCAATTCCTCCCCATCGTTGAGGTCTCCGCCCAAGCCAAAGAATGTTTCAA ACTCAAGTAAAGTATCTTCTAAATACTTGAGCTAGAAGACATGAATAACTATCTTTTTCTATCATTGACTTTACGAAGTA TTTTCTTAATTAATTTTTATGCAGTTAACAATGCTAGTAGATCATCAATAGATGAGCTTGAGGACTTTGCCATGGGGCAA GTGCATAATAATGCTAGTAAAAAGGCCAATGTAAATACTGGTGAGATTAAACAAAACTTAGCAGCTAAGACAAACAGAGA TAAAGGAGCTCCAGCTGCTAGAACGAATAAATTAAATGATGTTGATGATCTTGAATCCTTTTTCAGCATGGGTTCTCGGT CAAGCAGTGTACCAAAGTCAAGGGCTGCAACTATGGTAAAAGTTACAAATATAATAATCTCAAATGATTTTCCTACACTG AGACTATATTCAGTGTTTATTGCCTATCCGATTCTTAGGATCATATGTCTGATCGCCAAACAAATAACAAAGGGAAACCT GAGGCATCACCAAGAGCGTCTTCAGCATCCCCTGCCAACATGAAGAAATCTTCAGTGACGACATCTTTTGATGACCTGTC ATTGATTTTTGGTGGTACGTTGTTTAAACGCATCAGATTCTATAAGTGAAGTGTTTTCGTTGTCAAACATACCTTCATTT ATATTTATTTTTGTTTGGAAAAGGTTCCCCATCATCTGAGTTCATGGAAGTTGAAGGTGAAACTGAAGAAAGACGAAAAG CGAGATTGGGACGTCATCAGAGAGCGCAAGAAAGAGCGGTGGGTATTATTCATTATCTTATCAATTTTTTAAATATTTTA AAATAAGTAAATGGGCTCATGTAGAGAAATTGCATGTCATTTTGCCTAGCTTCTTAGCAATTTTTGTGATATTCCATTTT CTAAAATGATTTGACTGTCACCTTTTTAGCTAAATGATCGTTATAAAGACTCAGCAGCATAGGATATATGATATTTTTGT TTATATTTGTTTGGAATTTCATTCTGAACATTGACATTGCAGTTTTATTGAATTAATTTTTAAAGGGACAATGTTTTACT CTTCTGGTTGTATGTTTCAGTTGAAAGCAGTGGCTGATATGAACCAACGTGACCTTCAATCTAAGATGGAGCAAGAAGAA AAGCGTGTAAGCTTTTATAGTATTACTGTTTAGATTTTGATTTATTTCCAAGAATAATCCACTTCAATATGATAATCACT TTCTCTTTCAATCGCTTTAATATTCTTTCTCTTTCACCGTTTCATAGTGAACTCCATACATAACATGTGAGAGTGGAATT CTTACTAAGTTAAACTGATCTAAATTTATATATTTTTTAAACTTTAATCCTTATTTTTGTAAAAAAATAAAACTTTACCC ATTTGTTTTCTATTTTAATCCTTATTTTTATTACCACTTCAAAATTTTATAAAATTTTAATATTCTTGAATATCACTAAT TAATAATTATCAAATGATGTAAATTAAATTTCAATATTTAAACATAATTGGCCATCAATTTTAGAATTGAATAATTATCC TAGATTCATCTAGTACTTATTTTTTCAAGGACTTACTGTATATACACAGTCAGTGTAAAACTTTTCTACACTGACCTCCA ATGATTGTTTGTCACATCGTAAGCAAGTTTAAATTTAATTAATATAATAAATCATGTAACTGTTTTCAGCGTAAAGGAGT TTTACACTTTTTTAGTATACTAAATTGCTCTTGCAATTCCGACTCTGGTGTGGTGAAGGCTAAAGGTGTCCCTAAAAGTG CGGCTCATAAGAATTGAACTTTCGACGTAGGGGGTTAAACAACCACTTTTAACCACCACGATTGGCACCCGTTGGGTAAA GAAGTTTTACACTGCATCAAAACTAAACTCTTTTTTCAATTCAATTTATATTCCTTATCCTATTTTCAATTCAACTTCTA ATCCTTATTTTATTTTATTTTTCTGAATCCTTGTTTTTAATTCAATTTCTAATCCTTATTTTAATTTCTATATTCAATTT CTAACTCTTATTCTATTTTTCTATGCATTCCTTAGTTTTAATTTTAATTCAAATTCAAAACAATTTTATATATCAAGTTT AATTTGTTCATTGCAAATCCAAAATATAAGTTGTATAGGAAGATATTAATTTATTATAAATTTTAATTGTAATTATAATG CATGGGTTAAGATACTAGTAATGCTATAAGTCTCCAAATTCTTGTGTTTATTTTATATGTTTGTAAGTTTTTCTCAGTAT GACATTTTGACATTTGGTTTTAATTTTGGCAGAGAATTGCAGATACTATAGATGTTCAGATAAAGCGGTGGGCTGCAGGG AAAGAAGGCAATATGCGGGCTTTGCTATCAACATTACAACATGTATGCCCTTAGATCGTAGTTAATTGTTAATTCATCAT TTTTCTTTAGGCCACAGGACTCTTGAACATACCTCTTTTTCCCTGTAATATGAGATAGGCATGCTAATGTAAAAAGGTAT GCTTGGAAAGGAAATGGAAACACCAGGTTATTTGGCTTTTTTTATATGCAAGATAGGCATTTATAACCTAGATTCAGGAT AGCTGGTCATTTGGCATTCATGGACAAAATGAAAAACTAGTATGTCATATATGGATGGATTTATATAGAAGAACTTTGTT TTCAATCTATGTATATGAGTATATCGTGGCTCATCTTATCAAATGTTCTCTTTATCTTTTATTTTTAAAATGTTTGTAAT TCTGTGTCAATTTTTGTACAGAATGTAATATACTGATACTCCTGTAGTATGTAGAATACCTTTTACAACTTCTTACTTAA CTTGGCATTTGTATGCAGGTTCTTTGGCCAGAATGTGGTTGGCAACCAGTGTCTCTGACTGATATGATCACTTCCGCCTC AGTTAAGAAAGTTTATAGAAAAGCAAATTTATATATTCACCCAGATAAAGTCCAACAAAAAGGTGCTACTCTTGAACAGA AATATACTGCAGAGAAGGTTTTTGACATCCTTAAGGTACATTTTTAAATAATTATGAAGTAATACTTTATTTTACCTTGA AGTTCATACCCTTTCTTACACGATACTTTTAGTTTTGCCCCTTCTCATAGAAATCTCTGAACCGGTTTAGATGCAAATCA AAGAGTATTTATTTGAGCTTATCTAGTTTTTTTCATAGTAGATAAACTCTAATAAGCTCCAATAAGTCTGTATCAAAACG GGCTCTCTATTGAACTACTGCTAGCTTGCTTGATTTACATTTTTCATCATCATTAATATAATAATATGTACATATAATCT TCCTTGCTACTGTTCAAGACTCAAGAGTGTTGGATACTTCCTCATTCCTTTTACGTGTCATTTAATGTAAAACTCACAAA TTAATAAACATAATTAGTCTTCTATGCTAAAATTATTTTGTAATTCCCAAAAGCAAGGGTGAAAACCTTAACATATCTAA TCTAACAGTATTTTTCCCACATTTGTTCACTAAGTATAATAATTTCTTAAATATATTTATTCTTGTGATCTTAAAACAGG AAGCTTGGAACAAGTTCAATGCGGAAGAGCTTTCTTAGATCCTTCTGAAGGTTTTTGAGAATCAATCACGATTTGGGGCT ATTGCTGCTGCCTGATATGCTTTGTTCTTTTGCAGTTGAAGATAACTCTGTATAAATATTACGTGGCTTCATTTGGCAGC AAGTTCTTTTTCCTAATGATGTTCAATACTCTCACATAAGTTATCATGTTTTGGAAGGAATATTGACTCACATCATTGCA CAAATTTAAAATGATCTGATGTGCGTACATGGAATTTAGTCAGCACGCTCAAATTGTGATGACAAGGGCTTGTATTTAGA TTATTAGAGTTGCACACACGTAATATATTTTGTTGGAATGTGAATAAATTCAATGGTAACTAGGATTTTGTATGAAAAGA AATGTTTCGGTTAACGTTTTATTTGAGTCAGCGAATCATTTGTGATTTTGTATTGTCTTGTTTATTTTTGGTTTTCAGCC CCCTCCACTTTCTCCTATTTTTCATCTAGCACTAGTATCCTCCATGAACATTACATTAGACATTACTTACTTTTATGCAT TGTTTGAACTAACCCCCCCCCCCCCCTTCTCCTCTTTGATTGTTATATCAAGTGATGCCCGAGCATATCATTGAGCAAGT TAGCATTGTTAGGATCACGATTCAGATTGTGGGATCCTGGGATCTTTCTTAGGATTTTTTATCTAGATCATTGTAAGGAT CGCATGGGGATTGGCAATCCTTGGGGCTAGGAAGTAGGAAAGGATCTAGGATCCTGATCTGATTCTCATACTAGGGTTTG TGATCTAGTTTTTTTTTTGCCTACAAGTGGCCCAAAGGGGGAAATCCTTAAGATTAGGGCCCAACAGAGGCAATCCTCAC CGGTAAGAATGCACA
CDS sequence (LotjaGi1g1v0265600.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGACGAGTTTGGTGTGTTGACCGAAAGGTATGGATTGAAACCGCAAGGAAAATCGGCACCAATGGCCTCATCAAAGCG ATCCAACCATGATTCGGGTTCCAATCTTAAACCTTCCCAAAACGGATCCAGATCTCCCCAGCATTCCAATTTCGATTTTG ATTTCGGCGCTTTCGCCGGCGCCGAGAAGAAAAACCAGAACAATTTTGGGGGTTTTGGTGATGGCATTGATGAGATCTTC GGTGGAAAAACTGTGAAATCGAATGTCGGTGGCGGTGGTGGTGGTGGTTCGTTTGATTATGATTCGATTTTCGGCGGTTC AAACAAACCGGCTTCTACGTCTTCGTCAGTTTATGTGGATGATATATTCGGTGGAATGAATAATAAGCAGAGTGTTGGTG TTGATGATCTGCTTGATAAGATTGGTGGGCTGCATGCAAATACCAAAAGTTCCAATGAGAAAGGGATTGATTCTGATGAA TTGATTCCTGGGTTTGGTGGAAGCAATGTTTCAAATAATGGTAAAACAGGTTTTCAGATGAATAAGCCTCATAAACCAGC TGCCACATTGAAAAGTCCTCCTGCCCCAGCTAACAGCGATCCATTTTTGGTATTTGAAACCTCTGCAAGCACAGGAGCTT CAGATTCATTCCTGGACTCGTTGGAACATATAAGTAAGTTGAATAATTCCAAAGGTACCAGCTCCAATTCCTCCCCATCG TTGAGGTCTCCGCCCAAGCCAAAGAATGTTTCAAACTCAATTAACAATGCTAGTAGATCATCAATAGATGAGCTTGAGGA CTTTGCCATGGGGCAAGTGCATAATAATGCTAGTAAAAAGGCCAATGTAAATACTGGTGAGATTAAACAAAACTTAGCAG CTAAGACAAACAGAGATAAAGGAGCTCCAGCTGCTAGAACGAATAAATTAAATGATGTTGATGATCTTGAATCCTTTTTC AGCATGGGTTCTCGGTCAAGCAGTGTACCAAAGTCAAGGGCTGCAACTATGGATCATATGTCTGATCGCCAAACAAATAA CAAAGGGAAACCTGAGGCATCACCAAGAGCGTCTTCAGCATCCCCTGCCAACATGAAGAAATCTTCAGTGACGACATCTT TTGATGACCTGTCATTGATTTTTGGTGGTTCCCCATCATCTGAGTTCATGGAAGTTGAAGGTGAAACTGAAGAAAGACGA AAAGCGAGATTGGGACGTCATCAGAGAGCGCAAGAAAGAGCGTTGAAAGCAGTGGCTGATATGAACCAACGTGACCTTCA ATCTAAGATGGAGCAAGAAGAAAAGCGTAGAATTGCAGATACTATAGATGTTCAGATAAAGCGGTGGGCTGCAGGGAAAG AAGGCAATATGCGGGCTTTGCTATCAACATTACAACATGTTCTTTGGCCAGAATGTGGTTGGCAACCAGTGTCTCTGACT GATATGATCACTTCCGCCTCAGTTAAGAAAGTTTATAGAAAAGCAAATTTATATATTCACCCAGATAAAGTCCAACAAAA AGGTGCTACTCTTGAACAGAAATATACTGCAGAGAAGGTTTTTGACATCCTTAAGGAAGCTTGGAACAAGTTCAATGCGG AAGAGCTTTCTTAG
Protein sequence (LotjaGi1g1v0265600.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MDEFGVLTERYGLKPQGKSAPMASSKRSNHDSGSNLKPSQNGSRSPQHSNFDFDFGAFAGAEKKNQNNFGGFGDGIDEIF GGKTVKSNVGGGGGGGSFDYDSIFGGSNKPASTSSSVYVDDIFGGMNNKQSVGVDDLLDKIGGLHANTKSSNEKGIDSDE LIPGFGGSNVSNNGKTGFQMNKPHKPAATLKSPPAPANSDPFLVFETSASTGASDSFLDSLEHISKLNNSKGTSSNSSPS LRSPPKPKNVSNSINNASRSSIDELEDFAMGQVHNNASKKANVNTGEIKQNLAAKTNRDKGAPAARTNKLNDVDDLESFF SMGSRSSSVPKSRAATMDHMSDRQTNNKGKPEASPRASSASPANMKKSSVTTSFDDLSLIFGGSPSSEFMEVEGETEERR KARLGRHQRAQERALKAVADMNQRDLQSKMEQEEKRRIADTIDVQIKRWAAGKEGNMRALLSTLQHVLWPECGWQPVSLT DMITSASVKKVYRKANLYIHPDKVQQKGATLEQKYTAEKVFDILKEAWNKFNAEELS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 56 | 56 | - | – | |
| PANTHER | 1 | 536 | 536 | 2.3E-232 | – | |
| PANTHER | 1 | 536 | 536 | 2.3E-232 | – | |
| MobiDBLite | 21 | 50 | 30 | - | – | |
| MobiDBLite | 171 | 203 | 33 | - | – | |
| MobiDBLite | 227 | 369 | 143 | - | – | |
| MobiDBLite | 227 | 262 | 36 | - | – | |
| MobiDBLite | 275 | 292 | 18 | - | – | |
| MobiDBLite | 320 | 369 | 50 | - | – | |
| SUPERFAMILY | 385 | 535 | 151 | 7.85E-36 | ||
| MobiDBLite | 388 | 407 | 20 | - | – | |
| MobiDBLite | 392 | 407 | 16 | - | – | |
| Gene3D | 408 | 536 | 129 | 9.7E-40 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi1g1v0265600.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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