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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0267400 |
| Transcript ID | LotjaGi1g1v0267400.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | NAD(P)H-quinone oxidoreductase subunit M; TAIR: AT4G37925.1 subunit NDH-M of NAD(P)H:plastoquinone dehydrogenase complex; Swiss-Prot: sp|A7NVJ4|NDHM_VITVI NAD(P)H-quinone oxidoreductase subunit M, chloroplastic; TrEMBL-Plants: tr|V7AVZ4|V7AVZ4_PHAVU Uncharacterized protein; Found in the gene: LotjaGi1g1v0267400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:65354826..65356706) extracted from Lotus japonicus Gifu genome v1.2.
CACCAAGTCACCAAGGTATGTGTTTTTGAACTAATGGACACAATACACCTAAAAATAAGAATAGTCTAAAACTTATAAGG ATTGTCCATGGGCAAAATTGGAAAAAGCAGTATCCATGGAAGCAACTTTTCTTTCTTCTGTGACCACAAACATTTCTCTC TAGTAACTGAGAGAAATCTTATCCATACTGTAAGGGACATAGCAACTGGTAAGCTAGTTGAGTATTGAACTGCAACAACC ACAAAACTGATTAAACTGGCTTACATTCCCTAGACACACAGCATTTAGCCATGGCCACGAGTTGCTCCTACATGGTTTCC ACCAAATTATCTATGTTAGGCTGGACTGGAGGAGGAAGAACAGGGCTCAAAAACAAGAGAGCATTTTTCATTTCAGCTCA GCAACAAACAACTGATGTTCAAGAAGGAGAAGAGACAGTGAAGGAACAAGAAGAGCAAGAGCAAGTAGGTAGCCAGAAAA TGAACCCAAAAGGAGTGAAACCTAGACCAGCAGAGACTCAGATCAATGTGAAGAGCAAAAACATGAGCAGGGAGTATGGA GGACAGTGGCTGAGTACTGCCACGCGCCACGTGAGGATCTACGCGGCGTACATCGACCCGGAGACTTGGGAGTTTGATCA AACCCAGATGGATAAGCTTACCCTTCTTCTTGATCCCCAGGATGAGTTTGTGTGGAATCCTGAGACATGCAACATGGTTT TTTCGTACTTTCAAGAGCTCGTCGATCACTACGAGGTAATTTTTTCCTATAGCATGTATGGACCAGCTTATTTTTTCCCA GAATCAATTATGCTATCTAGAAGCTACACACAGAAACTTATATTTAATTTGGAATCAATTATAGAAAGATTTCTAAATAT ATATTAGAATATTGTCATCAATACTAAACTCAAACATCCAACAACAGTTCAAGGCTAAGCTTATCTAGCATGTAGGCCTC TACTTAGCAAAATATGGTAAAACAGAAGACATGTTATAGGCTATGCTTCACAAGTCTAGTTTGTAATCCAACAAATTGTG TAGTAAGGAAGTTGGTATTAGATTTTAGACATTTGCCAGTTTTGAGTCAATTAAAGCACTTGAATGTGATTAAGTGCATG TTCGGAATTCCTTCAAAAGTTGATTCAGAAGTCAAAATCAATTCTGAAGAGGAACAGCTTCCGTTAGTAGTTTTTGAGTA CCATATTGATTCTGATAGCTCTGGACGAGAATGTGATTTCATTTTGTTGTTAATTCTGCTGAATCTTGTTTTCTATGGTG AGATAATAGTCATAATACTAATCTTGAATGACTCAAAACAGGGTTCTCAATTGACAGAATACACGCTTCGCCTGATTGGT TCAGACATAGAGCACTACATAAGAAAGCTGTTATATGATGGAAAACTCAAGTATAATATGAATGCAAGGGTTTTGAATTT CAGCATGGGCAAGCCAAGAGTCATGCTCAACAATGATATTAAACCTGAAGACACCCCTGAGAAATAATTTGTGGAATTAC ACCAAGAGAATGAGAAAGTAATTGGAGTTTGTATATGATTATCGAGATGTGGTTAGAATGGTTAATTAAATCATGTAAAT TATACAAATCTCATATCCAACATTAGATGTTTTCTGGGGTTGAGTAAATCTAAATATCATTACAGCACAGAGTATTGTCT TACAGTCAAGATATTGCTGCAGTGCTGGTTATGTAACAATCCTTAGCCCTTCAATTATATTATTAGAAGTGCACATTTTA GAATAGTACAAATTTTGGAAAAAGTAAACTGAATATAAAGAACAGAACTCCTGCTACTAAGCTTCAAGTCACTATGTCGC ACACACTTTGGAGTGGGAACTCTTATAAGCATCTGTTTCAA
CDS sequence (LotjaGi1g1v0267400.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCCACGAGTTGCTCCTACATGGTTTCCACCAAATTATCTATGTTAGGCTGGACTGGAGGAGGAAGAACAGGGCTCAA AAACAAGAGAGCATTTTTCATTTCAGCTCAGCAACAAACAACTGATGTTCAAGAAGGAGAAGAGACAGTGAAGGAACAAG AAGAGCAAGAGCAAGTAGGTAGCCAGAAAATGAACCCAAAAGGAGTGAAACCTAGACCAGCAGAGACTCAGATCAATGTG AAGAGCAAAAACATGAGCAGGGAGTATGGAGGACAGTGGCTGAGTACTGCCACGCGCCACGTGAGGATCTACGCGGCGTA CATCGACCCGGAGACTTGGGAGTTTGATCAAACCCAGATGGATAAGCTTACCCTTCTTCTTGATCCCCAGGATGAGTTTG TGTGGAATCCTGAGACATGCAACATGGTTTTTTCGTACTTTCAAGAGCTCGTCGATCACTACGAGGGTTCTCAATTGACA GAATACACGCTTCGCCTGATTGGTTCAGACATAGAGCACTACATAAGAAAGCTGTTATATGATGGAAAACTCAAGTATAA TATGAATGCAAGGGTTTTGAATTTCAGCATGGGCAAGCCAAGAGTCATGCTCAACAATGATATTAAACCTGAAGACACCC CTGAGAAATAA
Protein sequence (LotjaGi1g1v0267400.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MATSCSYMVSTKLSMLGWTGGGRTGLKNKRAFFISAQQQTTDVQEGEETVKEQEEQEQVGSQKMNPKGVKPRPAETQINV KSKNMSREYGGQWLSTATRHVRIYAAYIDPETWEFDQTQMDKLTLLLDPQDEFVWNPETCNMVFSYFQELVDHYEGSQLT EYTLRLIGSDIEHYIRKLLYDGKLKYNMNARVLNFSMGKPRVMLNNDIKPEDTPEK
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 210 | 210 | 5.9E-104 | ||
| Coils | 36 | 56 | 21 | - | – | |
| MobiDBLite | 39 | 74 | 36 | - | – | |
| Pfam | 94 | 202 | 109 | 5.0E-43 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor | Catalysis of an oxidation-reduction (redox) reaction in which NADH or NADPH acts as a hydrogen or electron donor and reduces a quinone or a similar acceptor molecule. | ||
| Biological process | Oxidation-reduction process | A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons. |
Expression pattern of LotjaGi1g1v0267400.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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