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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0275600 |
| Transcript ID | LotjaGi1g1v0275600.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Pathogen-related protein; TAIR: AT1G78780.3 pathogenesis-related family protein; Swiss-Prot: sp|P16273|PRPX_HORVU Pathogen-related protein; TrEMBL-Plants: tr|I3SX13|I3SX13_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0275600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:67441462..67449411) extracted from Lotus japonicus Gifu genome v1.2.
GTTTTAATCTTAACCATTTATGATTAAATGTAAAATGTAACAGTCATACATTCTCATAACATACATCTTATATGTATTCA TATCAAATGAAGAGATTTGCAGGATGCCACCAGAGAGTTCAAATTCCGGCGAAGGAACTAATTTATTAACAATTAACAAC TAACATTTGCTTATAAAAAAAAAACATACATCTTATATATATTCAACAGAAGTTCTATTCATATCATAAACCTTATCTTC CTTCTTTTTTGTAGCCAAAGATGGCATCACCAAGTGTTGAAAAGGACAAGTACCGCACCTATTTGCACGGAGATGAAGAG AAGAACACCAAATGGAGATTTGGTGCCCCACCTAACTATGAGGCTGTGAATAAGTTATTTGAAGAAGGCAGAACCAAGGT CTCTCTTTTTCTCATCTCCCAATATTCTAGTGTAATGAATATGTATGAGAGTGTTCATGTTAGAATTCAATTCAATTCAA TAGTAAACAACACCTTTCATGTGTCAATGACAAATCCGAATGCCTGTTTGGATTTTCGTTGAACTGAATATGGATTCATG TTGAATTTGATGTGGCAAATCTTGCTTCTCTGATTAATTTCAACATGACAAATTCTAGTTTGTCAGTTGACGTTTGCAAC CGACTATATGCTTTTCATGGCTGCAGGAATGGCCTCCTGGATCACTTGAAGAGCAGGTGCAGACTTTAGTTAAAAATTGG GAAATGGAATTTTTCCACAAAGTTGATATAAACGAGTTCAGATCAATTGATCCTAAGAAATTTACTTTCAGCCTAAATGG TTAGCATGATTTAATTACCAGCTATTATTGCATCTACAGAATTTAAAACACCTGTTTTTGAAGTTAACATTTAATCAATC TGAAGAAATCTTGGTTGTTATGATGCAGGGAGAAAGCCTATGAGTTTGGAAGAGATAGGGGAACTTGGTGGGGGCTACAT TCCCATGTTGCAAACATCCCTACCTCAAAAACTGAGGCCTTATGACCCAGACAAAGAAACAAGATATTCATCTCACATAG CTTTTACTACTACTTTACCAAGAGGGTTTGCTTTGGAGATTCTCCAAGTGTATTCTGGACCGCCAGTAATTGTCTACAAG TTTAGACACTGGGGCTACATGGAGGGTCCTTTCAAAGGCCACGCTCCAACTGGAGAAAAAATTGAATTCTATGGAATGGC TATTTTCACGGTAAAATAACAACTATGATGATAATTACTATGCGTAGCTTAAGTTAATAAGAGGTAAAATTTTGACATTA ATATTTTGACACATGTTATGAGGTGAAATTTCCTAAGATACATGTCAAAATATTATCGACCTACCTAAGACTGAGGTGAT TTTAATTTTACCTCATATTTAGTTGAGGTGATTTAGACAGTGATTCTTCCTTTCTTCTGCAACAATTTTATGTTTTTGTT ATTTTTGGATCGCAGTTGGATGAGGATTCGAAAATCGTGAAGGTGGAGTTCTTTTTTGATGCAAATGAACTGATTGGAGG TCTTCTTAAAGGTCCTGAGTTTGATGGTAGTACTGAAGGTGGTGTTTCAAGTTGTCCTATTCTCAGGAACACTGGGTAGA GCAGCAAATGGAACTTTAAATTTGAACAGAACATATAATAATACAAGCAAATAAGGTAGTAATAATACCCCTGTGTAACA AGCTTGGTGAATACTCAATTAGGAGTTCCTCAGATAAGCTCTTTGGCTAGATCTTCCATGTTCCCAAATTTGTTGGTGTA TACATCATGGATTTTAGATAAATTAAGCAAATAGTTTTATTTTTTTCTGAGCATAGGGATACTTAATGGACGAAAATCTT GTTATTTGTTAAAGCCGAACACATCATTATTTTGGTAGGACTAAGAGGTTTCTCCATTTACAATACTCGAACGGACACCT TATAAAAATGAATTAAATATTTACAACTTAAACCAATTACTCGTTGTTCAATAGACTCTCTTGTTCAATTACAAAGTTAA AGGGACTTTAGGCCATGATCAGAATGTAATTATTGCCAGTTAGATTGGTTAGTTGCGGATCAGCTAGGTAGTTGTGATTA GTTCCATGACTAGCTATAACTATGATAATATAAAATGCACATTGTGCTCCACTAAAATCACTTTTCTTATTCCACGAAAT TTTATATTCTTCTTTCTTGATCAAAAAAAAAAAAATTTTATATTCTTCTCCCATTACATTTACTTGAAAATTCTCTTAGC CTGTCTCTTGACAACAGCACAATCATATTTGCCATCTACTACATCAAATTATATGAGTTTATGCAGTTAGTTATCATTAT ATCTATCAGCTTCTGAGTCTTTTCAGGAGTCTTGCTATTCAATCTTTGAGAGTGTTTGCAAATAACTTGAATAAAACTCT TAAAGACATGGAATCTAATTTGCAACTAAGCTTAACACTTCATCTATTCTTCTTGTTTCTTATTTGCCTTGTTCCTCACA TAATACGACTACCATCATCTTCATCTGGTTTGGCTTTACCTCTGCTACAGGAACAGATGAGGCTATTTAGTCCTTCAGCA TCAACGTTTAGAACTTAATTATCATTATAAGAATACAATTTTGGCACTAGTAAGGAAATATTTTGCCTTTATTTGTATAA TTTGTACATTACTTCCCATGTAATGCTATACTTTGGACGGCAAAGAAAAGACAAACCCAAGCTTTGGAATATCAACCCAA TGCAACATTAACATATTATAGTAAGTTACTGAAAATAGAACCCTGCATCTTCTTCATCAATCATGGCACCAACAGTGCCA TTGACTCTTGAGACAGAAAAGCAACCTGTTACATATGTGCATACAGTTTTAGAGACAGGTCGCCTTCTTGCTTCATCCAG AGGGAACTCCCTAGCACCTGAATTTAATCATTCTCCTAAGTCTTCTGCTGCTTATGAATCCATCCCTTCCCATTACCCAA AATCTTTTGACTACAACATTGTCATCACTGACAGGGAGCATTTTCACCGTTTCATCATAGTTTCAGTGGCAATAATATTT GCTATCACAGCAGTGATTTTATTGGTGCACTTTTTACCTCAGAAGAACAAGCATCATGGTTCTTCAATCAATCTCAAACT GGCAGTGAACCAAGCTCTAACCTTTTATGATGCCCAAAAATGTACTACTTCTCTAGTTTTCTTTGTATTGCACATTCTGC TTTCTTTCTTCTTGTAATTCAACATTGTTTTCTTTTGCCTTTTTTTGGTAGCTGGGTACTATCCAAGGAACAGTCCAGTG AAATTTCGAGGAGACTCGGGATTACAGGATGGGAATTCAGCTAAGGCTAATCTTACTGGTGGATTTTATGATTCTGGAAA CAACATTAAGTTTACCTTCACCACTGCTTATACTATGACCTTGTTGAGTTGGAGTACAATGGAATATCAAGGTAAATATG CTGATATTGGTGAGCTTCACCATGTCAGGGAAATCATAAGATGGGGCAGTGATTACTTGCTCAAGGTGTTCATCCCCCCA GATTCAAAATCCGGATCCAACCTTACAATGTATTCCCAGGCAAGTTAATTAAATTTTGAAGGAAAAAACTTCAACATGAT AGTTGGACCGGTATGACCGAGTAAGGTCATGGGCAAGGAGCTCGGGTCAAAATGATTTATATCGTTGGCAAAATAAATAG ATTTACTCTTTCAATCAACTGATCTAATAAGAGTTAGGTCAAGGGCATGGAACTCTATGAACACTAGTGTATGTATCGTT TGTGTTGTTGCGCAATGAAAAACTCACCAGCCACTTTCTTAATATTTATTAATTTTATTAATGCGATAACTTCCCTTAAC TTTCCATTTTTCAACCCATGTGTCATGTTTTAATGACAACAGTATATATATACCTGTGTCTAAGTTTTGTCCTGCAATTC CTACTGAGTTAGTTTCTATTGGTTATGAATAGAATTGTTGTGTGTTTTTACAATTTATCAGGTTGGAAGTACCATTAGTA ATAACAATGAGCCCAATGATATAAGTTGCTGGCAAAGACCTGAAGACATGAAGTATGAGAGACTTGTTTCAACATGTGAT GGCTCTGCTTCAGATTTAGCTGGCGAAATAGTGGCAGCATTATCTGCAGCATCTATGGTATTCAAAGAAGACCAAGATTA CTCAAGGAAACTAATCCAAGCAGCAGAGAATTTATATGAGGCAGTTACAAAGGAAGATCCTAAGAAGCAAGGGACCTACA CCAATGTTGATGCCTGTGGAAAACAAGCTAGAATGCTTTACAACTCAACTAGTCACAAAGATGAATTGGCCTGGGGAGCA ACTTGGTTATTTCTTGCTACTGAAGAGACTGATTATCTTGCAAATGCAACTGCATTATTTTTGTCAGCCAAGGCTGATGA AACAAATTTTAACAAAGAGGTGTTTGATTGGAATAACAAGCTCAATGCTATCGCGGTAACTTCAGGGCCACACAATCTGA ATTGTTAGATGATTTTGAGATTTGACAATGAATCTTAGTATAATTTTTTTCAGCTTATGTTTGTAGGTTTTGCTTACGGG TATTCGATATTTCCAAGATCCTGGATTCCCATATGAAGATGTTTTGAAACTCTCATCAAACTCTACAGACTCACTCATGT GTTCTTATCTACTCAACAAATATTTGAGCAGGACACCTGGTAATTAATTTCTGATCAATTGTAACATACATTATTTGCTA GTGTGGGATTAGGGTCCAACTACTGAGGCATAAATATGTTATCTATGTATATGATTCTTGCTAAACATAATGGTAGGTGG ATTGATTATCTTGAAACCTGATATGGGGCCATTACTCCAGTATGCTGCAACAGCATCTTTTCTCAGTAAATTGTATAGTG ATTACCTGGACCATCTCAAAATGACTAGTGCAAGTTGCAAGAATGATGAATTCTCAGTGAAAATGCTTCGCGACTTTTCT AGTTCTCAGGCAAATCCCTTGCCTTATGGTTCTTCATATTGTGACCTATATAAATTGAAAATAGTACTAATTTTGCTCCC TTCTGTTTTGTGTGCTTCAGGTTAACTACATACTTGGACAAAATCCTATGAAAATGAGCTATTTAGTGGGCTATGGTGAC AGGTATCCAGTCCAAGTTCATCACAGAGGTGCATCAATCCCTTGGGATAACCGGTATAAAAATTGTGATGATGGTAAGAA ATGGCGAAACTCGAAAGACCCGAATCCACAAGTTCTTTTGGGAGCCATGGTGGGAGGGCCAGACACAGATGATAAGTTCA GTGATCAAAGGAGCAACCAAAGGTTCACTGAGCCAAACATTGCAAGCAATGCTGGGTTAGTTGCAGCATTGATTGCACTT CAAGATCCTCCTTCTAATTCACAGGACATAAAAAACTCCTTGTGGGGATGGACTTGAATCTATATTTATTATTTAAACAT GTTCATTTGATTCCAAGAATATATGTTCAAATTCTTACATCTTGGAGGAATTGAACTATGAGAATACATATAGGAAAAAG GAAAGTCTAGAAAACTTCTCGCTGGCAATTACAATTAAAGCAAATGAATTTCATTTAATGGATGAATTTTCATGACACTC TTTATGTCATTTAATGTTAAGCTGGAAATTGGTTACTCAAATTAGTGTTCATGTCACCGAATTAGATCCTCTAGGTAGAT GAAATATAACTCAAATTCTAATAACAAAAATGGTGTATAACCATCTATATTGACCATCCGGATACAAACTTGTAACTACA GTGCTGTGTTGACACAAAATTTACTATACAAGCAATTTACAAAGAAACCAAACTATATACACTACACAAAGCTGTTGAGA AGTTCTTCTATCTTGACTTCAGCTTGACTTAAGCTTGTCCAAGTCATATGCTTTCTGCAAAAAATATATTCATAAGGTAA GTAGATGATAGGAAATCCAATTAGCATGACCAATTGATGTTATGCAAGGAAACACAAAATTGACACTTACCAGAAGACAA TGGATATCCTCAAGAAAAGGCACAAGCAAAGAAACCAGGATCTGCATATTCTCCTTTAGGGTCTCATAGTCTTCATTTTT CCCCCTGAGGAGATCCACGAAAGTTTCAGTATCAGGCACTAGTTTTACAGCCACCTGCAGCACCATTTCTGTTAGTTCAG CAGAAAACAAATGCACAATTTTGGTCACCATGCTAAACTATGCAAGTTTTCTATTTATATATTTGCTTAATTACCATTCT AAGTTATGCATATTTGTAAAGCCTTTTGTAATTGATTTTAAAAGCAGCACGATTTACGGAATTGATTCGATGAAAGAGAA GCTGATCTAAACATGCTAAGAATCCATCAATATCTGTGTCCCACATGTGTCCAGCCAACCGGAGGTCTCGGCTTGAAGTG TCCAAGCCGGAAAAAAATTGCTCAGACACCGCAAAAATATGTCTGACACGTAAAGTAAGGATGTCAGTATTTCTTAGCAA ATTGTTATTACCTTGAAAGCTGCTGATGCAATCCATCCATGCCATGGTGTCAAAGTTGCAGCATAAGATTCTTGAACTGC TTGCTCCATATTCTTTTTAGGATCTTTTGCTAGTGCTTGTAACAAGGCTGAGGAGAAATCTAGGGATCTGCAGGGTGGCA CATCTGTTAGTGAAAATTATTCAACTTATTGAAAATAAACTACGGAAGATAATGCCTTCCATTATTTATTCTGAGTGTGA GGAATAACTAAATAAGTAAACAAAAGAAAACTACAGATATATGTTCACCTAGTGAGCCAAACAAAGGATTTACTGCAGCT ACACCACGTTGACTTGGCGTTGCCTTTGCTAGCTTCTGATTTCAATATCTCAACCAAATTTGAATTCACTGAGGGATTTG ATTCATGCATGGCTTCCAACCTCTGCAATAACAAAGAATATAGGCATGTTTGAGAACTCTTCTACAACTGATTCTGGAGA GAAGCTTATATGATAAGTTTTTGGATGTCATAATTGATTTAAAAGAAAAATAAGTTCATCCATACATGCTATTAGTAGCA ATGGCAATACACCTCATGCTATTAGTAGCATGTTAACTGAAAAACTGAAAGTCAACACACCTCATGCTAATAGACAACAA CAACTAACACAAAAGTTTAAAAGGTAAAAAAGAAAGAAAGCTACTGCTACTATGCATAGATAGTTTTCATTCAAGTAATG TGAACAGATTTAAGAGTTTCACTATGCCTTAAAATTCTTTTTTTACCTTGATATTTTGGTAAACGTCTTGTCTCAAAACA GCCATTGTTGGCCCAATCTTATCTGCAAGAGGATCAATCAATCAAGCATAATGACAAAATGTTTGGAGTTGCATCACATT CATGTTTGAAAATGAAGAAATGAAATAAGCAAAACCCACCAAGAACTTGTACAATCAAGTAACATAGTGATAGGAAAGGC TTGGTGGGGATGTGTGCATCCTCTTGATTTGATCCAGGTTTGACTATAACCAGCATGGAAAGCTCTTCAATGGCAGAGTT TATTTCTGACCTCTTCTCCATATCTCTGGTCCTCTTCATTTTCCCTTATCTTCCCACCTCGTTCTTCCAATCTGAGATAT ATATAATATAGACCCAACTGGTCTTTTTTATGAATAAACACACCTTGAGCGTGGACTTCTAAGTTCTAACTCTAATCAAC TGTTCAAAATGTCATGGACAGAAGGAGAGGAAGAGAATCAAGTTGCTGAATCAAAGGAGTGAGTCTTGCTGTGCCCAGTG CCAACTGTGTCAATTGTTAATTCTTCTTGACATTGATATATATATATATTTGGTAAAATAGCTTCTTGGGTCTCAACTCT CTTTCCCTCTCTTTTTTTTATTAAGGTTTGCTAATAATATTATGTGCTTTCAATGTCTTCTGTATGCCCTTGATGGGGAC TTTAAATTTGACCTTATAGATATCATCAAC
CDS sequence (LotjaGi1g1v0275600.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCATCACCAAGTGTTGAAAAGGACAAGTACCGCACCTATTTGCACGGAGATGAAGAGAAGAACACCAAATGGAGATT TGGTGCCCCACCTAACTATGAGGCTGTGAATAAGTTATTTGAAGAAGGCAGAACCAAGGAATGGCCTCCTGGATCACTTG AAGAGCAGGTGCAGACTTTAGTTAAAAATTGGGAAATGGAATTTTTCCACAAAGTTGATATAAACGAGTTCAGATCAATT GATCCTAAGAAATTTACTTTCAGCCTAAATGGGAGAAAGCCTATGAGTTTGGAAGAGATAGGGGAACTTGGTGGGGGCTA CATTCCCATGTTGCAAACATCCCTACCTCAAAAACTGAGGCCTTATGACCCAGACAAAGAAACAAGATATTCATCTCACA TAGCTTTTACTACTACTTTACCAAGAGGGTTTGCTTTGGAGATTCTCCAAGTGTATTCTGGACCGCCAGTAATTGTCTAC AAGTTTAGACACTGGGGCTACATGGAGGGTCCTTTCAAAGGCCACGCTCCAACTGGAGAAAAAATTGAATTCTATGGAAT GGCTATTTTCACGTTGGATGAGGATTCGAAAATCGTGAAGGTGGAGTTCTTTTTTGATGCAAATGAACTGATTGGAGGTC TTCTTAAAGGTCCTGAGTTTGATGGTAGTACTGAAGGTGGTGTTTCAAGTTGTCCTATTCTCAGGAACACTGGGTAG
Protein sequence (LotjaGi1g1v0275600.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MASPSVEKDKYRTYLHGDEEKNTKWRFGAPPNYEAVNKLFEEGRTKEWPPGSLEEQVQTLVKNWEMEFFHKVDINEFRSI DPKKFTFSLNGRKPMSLEEIGELGGGYIPMLQTSLPQKLRPYDPDKETRYSSHIAFTTTLPRGFALEILQVYSGPPVIVY KFRHWGYMEGPFKGHAPTGEKIEFYGMAIFTLDEDSKIVKVEFFFDANELIGGLLKGPEFDGSTEGGVSSCPILRNTG
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 4 | 236 | 233 | 1.0E-111 | – | |
| PANTHER | 4 | 236 | 233 | 1.0E-111 | – | |
| Gene3D | 121 | 215 | 95 | 9.1E-9 | – | |
| SUPERFAMILY | 134 | 209 | 76 | 2.02E-14 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi1g1v0275600.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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