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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0280600 |
| Transcript ID | LotjaGi1g1v0280600.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Abscisic acid receptor; TAIR: AT5G53160.2 regulatory components of ABA receptor 3; Swiss-Prot: sp|Q9FGM1|PYL8_ARATH Abscisic acid receptor PYL8; TrEMBL-Plants: tr|G7J6S4|G7J6S4_MEDTR Abscisic acid receptor PYL9-like protein; Found in the gene: LotjaGi1g1v0280600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:68450516..68453477) extracted from Lotus japonicus Gifu genome v1.2.
AATATATAATTACATGTGTAAATATGCAACTGGTACATGTCATTCATGTACCATGCCCAAAAAAAATCATGTACCAGAGA ATTGTTTTTGCCCTTTTCCATCATAATTTAAATAAAAATTCCACTTATTTATTTCTAATTAATTTGGGATAATAGAGCTA GAGAGAGGAGAAACAGGAGTAGTAGTTGGTGGCGGTGCGTTTCAGTTTCGCAAGCATCTTCTTTCCTCTGACCAAAAAAC TGCTTCTCGAACCTTCCGCCGGAGAACCTCGCCGGCCGGCGTCGGCAGCGATCCTCGAATCGATTTCAGCTCCGCATCTC AGGTGGTTGACGGCGGAATCGGTGGCGAAGAAAATGGACGGAGGGTTTAATAGCACGGAGATGGAATACATAAGGAAGCA CCATCACCAGGATTCCGTGGAGAATCAGTGCGCCTCTGCCCTCGTCAAGCATATCAGAGCCCCAGTTCCTCTTGTAATCA ATCAATCAATCAATCAATCAATCAATCAATCATCTTCTCCTCTTGTTAGCTTTGTTAGATCAGCATTTCTTGAATTTTCT TGCAATTTTCCTAACATTTATTGCTGTTTCTTTTTCTGTTTTTCGATTATGATTTGTAAGTTTCTGAATTTCTAGTTTTG CTTTTGCTAATTTTGTTGAGTTTGTGAATTAGATAGTTTATGTATGATTAATTTTTTCTTTGTAATTAATTGTTGCTATG AATATGAAATTTTCAAGTAATTGTTTTTTGACATAAGTTGAAATTAGCTATGAATATGATGATTTATGATGCAGAAACTA TGCTGAGATTGGTTGAATGATTCTTATGTGTGGTGAATGGTGAAGGTTGATTATCATGTTTCACTCTGAAATGGAGTACT TATTGTGCATTAACACTTTCTTGTTTTTTGTTTTTGAAATCTAGGTGTGGTCCTTGGTGAGGAGGTTTGATCAGCCGCAG AGATACAAGCCGTTCGTGAGTAAGTGTGTGGTGAGGGGAAACCTTGAGATTGGGAGTCTTAGAGAGGTTGATGTTAAGTC AGGGCTTCCTGCTACTACTAGTACTGAAAGATTGGAGCACATTGATGACAATGAGCATATCCTCAGATTCAAGATTATCG GTGGTGATCACAGACTTAGGGTATGGAGATTTCCCTAGCACTTACACTTTTATTCAACAATTACCTGCTTTATTCTTCTT GAAAACAATAAAAAAAGCATTTCACTCCTGTAAGAATCCTCTTAGTGCAATTTTGTCCATGTTTTATGTTCAAACTTGTA TGTAATTATTATATATGCTTTTGTGCACACGGTGTGCAAATTTAATCTTTGTTGGCAGCTTGAAAGATAACTTTTTCGTA GCTGTGGTGTTGGCGCCATTAGGGAGATCTATTACTTAGTTGCTTGAGTGTGTACATTGTGTTTCATTCATATAGTTGTC TGAATGTGATCGTGTGCTCAGTTGAAGGAAGCTAGGTTCTGAATAGTGCTGTCTTTATTACTTCTAATGTTTATTATTTA GTTGGAAGATGCTGAGTGTATCAGCACTAGCCAACTTTATACCCATGATTTTAGCTTTTGCTTGTAGTTGGAGGAATTTT ATCTTCATACAAATTTGTCATTTTCTTTATGATGGTGAGTTTGCTCCTTCAGTTGACATTTTTTATGCATATCTTCTTAT TACTGTTTTCTGTTCTGATTTCTCCACCAAAACATGCAGAAAAGTTAGGATGCTTTTAGCACTTATTGCTTTTGCTTATT GTAGTTTGAACTTTTCTTGTTTTCCTCAAGTCCGGACGAATAAAAGAAATTCAGTTTTTGGTCTAAGATATATGTATCTT TTGTCCTTCAGAACTACTCGTCGATTGTGTCCCTGCACCCAGAAATAATTGATGGAAGGCCCGGTACCCTGGTAATTGAA TCTTATGTGGTGGATATACCCGAGGGGAACACCAAGGATGAGACCTGCTACTTCGTTGAAGCCTTGATTAAGTGCAATCT CAAATCACTTTCTGATATCTCAGAAGGGCTTGCTGTCCAGGACCTCACTGAACCAATTGATCGGATATGTGAGTTGTTGA TAAGAAGTGGCTGAGAACTTATCTGCCACAGATGAATGGCAGCACTGCTTGTTCCATCTGTTACAGAATAGTATGGTTGT TTATTGAATTTGCTCTGTTAATTATTATCTCTGCTATGTTTGCTGGTTTCTTCTCTCTTTAGTGGAGTTTAAAGGACAGA ATTTTAGACAGGTGCTTCAGCCTGATCTACATTACACGTTCATGTTGTATATAGGTGCTGGTGAAAGCTAGTCTGTAAAA TTGTTTCAATTGGTCAGTTGTAATTTCTGGTTGCAGTAAAATTTTGACATCTAAAAGGAGGATACTTGTATAAATGGATC TCAACTGCTTCTGTGGTTCTATATCTATTAGTAGTATTTAGAACTTTGGGTCAATGTCAGTCAATTTTTTTGGTTTTCAA AGTATCTTTAATGAAAAAGTTCAGAAGTAGGTTGCCTGCACTTACATTAAAAGGGATCTAAGTTCAAAAGAAGTAATATA ATTCTGCACCAACTAGTAAACTCTACTACCCCAGGTAAAAAAGCGGTGACTCTTTGTTATGTTTTCGGCTCTGTTTTCCT GTTCTTTCATGCTCATTAAAGCTAATAAATAATGATAATGCTTTTGGTTTTTCTTTCCCTCATGATCCAGGACATGTAGT TTTCTCAACTTGAGAACACATTCTTCTGATAGTTCCTTGAGTTTTTCTCATGACTGATTCTATACTTAAATGTTCTAAAG TATGTCACTATCATGAGTGCTTTGATTTGATGGTGTGATATTTCTGTTCTACTACACGTTACTGAAGTATTCCAACTTCC TTTAGTTCTGGTGCATCTTTTTCATTGAGTATTCTAAAATGAATCTCTCCGGATACTCCTTAACTTTGAGATGTCTCAAA CA
CDS sequence (LotjaGi1g1v0280600.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGACGGAGGGTTTAATAGCACGGAGATGGAATACATAAGGAAGCACCATCACCAGGATTCCGTGGAGAATCAGTGCGC CTCTGCCCTCGTCAAGCATATCAGAGCCCCAGTTCCTCTTGTGTGGTCCTTGGTGAGGAGGTTTGATCAGCCGCAGAGAT ACAAGCCGTTCGTGAGTAAGTGTGTGGTGAGGGGAAACCTTGAGATTGGGAGTCTTAGAGAGGTTGATGTTAAGTCAGGG CTTCCTGCTACTACTAGTACTGAAAGATTGGAGCACATTGATGACAATGAGCATATCCTCAGATTCAAGATTATCGGTGG TGATCACAGACTTAGGAACTACTCGTCGATTGTGTCCCTGCACCCAGAAATAATTGATGGAAGGCCCGGTACCCTGGTAA TTGAATCTTATGTGGTGGATATACCCGAGGGGAACACCAAGGATGAGACCTGCTACTTCGTTGAAGCCTTGATTAAGTGC AATCTCAAATCACTTTCTGATATCTCAGAAGGGCTTGCTGTCCAGGACCTCACTGAACCAATTGATCGGATATGTGAGTT GTTGATAAGAAGTGGCTGA
Protein sequence (LotjaGi1g1v0280600.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MDGGFNSTEMEYIRKHHHQDSVENQCASALVKHIRAPVPLVWSLVRRFDQPQRYKPFVSKCVVRGNLEIGSLREVDVKSG LPATTSTERLEHIDDNEHILRFKIIGGDHRLRNYSSIVSLHPEIIDGRPGTLVIESYVVDIPEGNTKDETCYFVEALIKC NLKSLSDISEGLAVQDLTEPIDRICELLIRSG
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 5 | 173 | 169 | 4.0E-75 | ||
| PANTHER | 8 | 176 | 169 | 2.2E-103 | – | |
| PANTHER | 8 | 176 | 169 | 2.2E-103 | – | |
| SUPERFAMILY | 30 | 167 | 138 | 3.44E-31 | – | |
| Pfam | 31 | 166 | 136 | 2.2E-17 | ||
| CDD | 32 | 165 | 134 | 7.67849E-33 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi1g1v0280600.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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