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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0284300 |
| Transcript ID | LotjaGi1g1v0284300.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Zinc finger protein CONSTANS; TAIR: AT5G53420.1 CCT motif family protein; Swiss-Prot: sp|Q9FHH8|COL5_ARATH Zinc finger protein CONSTANS-LIKE 5; TrEMBL-Plants: tr|I3SDD2|I3SDD2_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0284300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:69205022..69210869) extracted from Lotus japonicus Gifu genome v1.2.
GTTATATGCTCTTGCATCACATTTTCCAAAAGTCCTGTAAGCATCCTCAAATTGCTACCCTACTTATTCACCTTCACCAT TTAATATATAAATTCTCTCTCTTGCTTGTCATACATAAATATCATCAAAGCTCCTTTGTCCCCTTCTCCCTCATTTTGCT GCCCTTTCTGTATGTGTGTGAGCTTCTCTTCCTCTGCTTCTTCCAATACCATCCATGTCTGTTGGAAAAATGTATGCAGA GGCCAACCTCCTCTACCCATATTTGCACAACTTCTCTCAAGAGCTTCATCAACTTGAGGAGTACTGCACAACCCAGAAGT TCAATGACTCAATGGTGCCTTACTATTCCTTTCTTTGTCTCTTACTCTGTGTGTTTACTCCATTTGGTTCTCTACCTGTG CATTTATTTCACTGTTTTTCCCCTTATATTGATTAAATTTTGAAACTTCAATTTTTCTTCTGTACCCTGAATGGCCCCTT ACTCATTTTTTGGATTTGGGTCACTTTGTATTTTAGAATTGAACTTAGTTCCTATGGAGTTTATTGCTAAATTTGCACTT CAATTTTCATTTATCACATTTCAAATTATTGTAAAGTTTCTGTCTTTCTGCTTTTTAATATATAAATTTGTAGCTCCTTG CTTACTTGATAATATCAAGGAAAACCAACAATTGAACTGTTTCAGATTATTGTAAAGTTTCTGTCTTTCTGTGTTTCTGT TTGATCATTTGATTATAGCACCTTCCCTTCTTTCTGAGTGTTTTCTCAAAGTAATAGCATAAGTGGAAACAGCTGGAGTT GGGTTCTTGTTCTGGATCTACAAAAGTATGAGAAAATGAAAGAAAGTGAGTGTGAAAAGGGAATATTCTCTTTGTAATAG TTCCGTGCTCTATAATCTTTCTTTCACATATTTTTTTAAGTTCCTACTTCCTAGTGTGAAGGTTCAGTGGGATTTGTCTT TTTTGTGCCGCACTGAGGGAGATTAAAGAGGAAAAATGCCTTTTTATATGCTTTTCTTTTTTATAGTGAGGAGAAAAGGT TGGAGGAAGGGGTTTGTTAATGCTCAACTTAATCATTTCTTTATGGTCTTTTTGGGTATAGTTATAGGAAGGCTATTTCT ATTTCTGGTCATGTTAAATCAATGAGAAAAGTAGTTCTTTCTATATGGTGAGTGGTTTGCTGTTTATGGTATTGGAATTT CAATTGAAGCAATGTTTTTGTGTCAAGTAAGTTGCACCTTGACTAATCCACCTTCTGGTTTGGTCAAAAGAAGGCCATGA CCATCCACTCGGCCTTACAACTTACAAGGATATTGCTTGGAGCGCAACCTTTAATATGAGGATACCTTTTTTCAGCTTAT GGTATTTTAATAAGTTTATGTTTGTTCTTCAAATTTTCTTTTAACCAGGTTCCTGCATGATCATATGCAATAATTGTCAA GTTCAATCTGGACTTTGTGGCTGTTTGGTGCCAGTTCCACTGTTTCAGTCCTCAACACCTGGATTTTTTTCCCGCACTCA ATATCATGCTTCAGTTGATGCTTGGGCTTTGAATTTGAAGCTATCTACCTTACTCCAATTCAATTTATTTGAAAGCTTGA GGCTAGTGAGCCTTTTTTTTGCATGCGAAGGCTCTGCTGAACATGTATTGGCACCTTTTGTTTACATAAGTCCTATTTCA TGCAGTATTGTGCTATTGTATATGGTATTTGATTTGGTTCTTTCTAAAATTGAAAAGAAGAGAATCCCTGTCTTCTTTAC TTTTGAATATTTAACCTGCAATATGTACTATTGTGGTTATTAGTACCTGAGTTGAGTTAATCAAAACCAGAGAATTTTAC ATATTTATTAAATTGTCCTTGAAACTCTTTGAAGCCCTTGCTCAAGTCTCTCAATGGCTTATAGCTTTTCCTGTCACCTC ACTATTTCAGATAGATTCTCTCTTTTTTTTTTGTTCCCATTTTTCTCTCTTTCTTCAAAAGTTGAGGAACAATGTCTACA TGGTCTAATCCCCATATATAAAACAATGTTTTGGGAGGATGACCATGATATGCATTGGAATCTTTTGCCCATTCTAAGAA TTTTATAATCTGGTCAGTGGCTTTAAGAACCACTTGATGGAATCATGCATATAATATCATGAAAACTTTTGGCATTATTA ATGTCAGGAATCCCATCTTAGAGCAGGTTCTCCATATTAATTAGTTAAATATGATGGTGATAGAAATTGTGGTTAAGGTC AAACACATCTCTGGGTTTCTAGTATTAAATGCTCACAGTAACTGACTTTTGGATATAGATTAAGGCCCTGTTTGGAAGAG ATTACTTGAGCTTATATTATTGCATAATTGTTTATGAAAGTGTTTGAGAGAGCTTATGTAAATAGCTTATGACCTACCTA TAAGTTGTTTTGAGCTTATTTTTAATAAATTGTTCAGATTAGCTTATGCTTACCTTTGTAGTTCATTTTCTCAAATTAGC TTATGAATAAGCGCTTATGTGATAAGCGGTTGCCGGTTATTGCCATAAGCGCTTAATTAAACTGTTCACCCAAACACACC TTAAACATCAAAAGTACTGTTTATCCACCCTTCTCTTGGTGGTTGCCAGGGAAGGGAGAGGGAAGTGTAAATCATTGTAA CCCAAACTGCATCTTGAATTAACTGAATGAAATGTACATTCCTCTTCGGTTGTTTTATTACAATACTATTTCATCTGTTT TCATGACTTTTTCTATGGCTCTATGCTGAGTAATTTTTCAATACCTTTTTATGTTCCAAAGCCAACATTCTAATTCACTT ATTAGTTGCTATTTTATGGTTATCCATTCTTTATTGTTGTCTTTGCTGGGCTCCACAATGAAAGTTAATTTCGTTTCTAT AACTGTTACATCTGTTAATTATTTTGGTCTATTTCCCTATGTCTCTAATGCAGAGTGACCTTGTCGAGTTTTCTTCCATG ACGGAGTATGATTTGACAGCCGAGGGAGATCTGTTTAAAGCACCTGAACCTATTATTGAAGAGCCAGTCATGGACCTGGA TTCCATGACAGCAGCCATGCCGATGATATCTTGCGGGGAAGATGTGTCCTCACAGGCACTGGAATCCACAGATATTGATA TTCTTCAAAATGAACAGCTTCTGAACGAGGTATTCTATGAATGCAAAAAGGATCTCTTACAAAATGCAGCATTAGTGTCA CCACTTTCTGAGATTCTGGAAGTCAAGATTCCTTTACTGAGCATTGATGAGAATTCAATTCAAGAAAACAAGCCACTTCC TGACATGCCATTACCAAAGAGCGTCAGTTCCGGAAGTTTGAGCTCAATGGACTGGATGCAAGGAGCTGCGATGAAGCCTG CTTTCCTTGATATCCCTGGAATAGATCTCAGCGCAGTTTATGGCATGCGGAGATCGTTTAGTGAAGGTGATATAAAGGTC TGAGTTCACTGATCCATATATATATTGAGTCTTATGCTTTTTTAAATCTTCATGAAATTATGCAGCATTTATTTAAGCTA TATAGGTAACAGCTTAACAGGTCTGGTTTTTTCTTGAAATTGGAAATTGATGTTTTAAGAATACTTCTTCTTTCCCTGAC ATGTTTAGAGTAATAGATTAGAATTTGATAGCCATGATAACAACCTTATCATGGAATGTCATTTATAGTAAGTTTTGGAT TCCACTCAGAATCTTCATCCACCTCAATCTAGAGGGGCTTAACTACTTTTTGAACTTGATCGAGAAGGAAAACTTATCTC AAACTGATTCTGTTATTCTCATGATTTAAGCAGTGTGAAGAAAATGGGAATTATGACATGGCCTGAATCTGATTGCTGAA TTAGAAATAACAAATTTGGCTGTATTTTCTTATAATACTTCATATATTTGAAAGATTGCTTTAAGTTTGGTCAAAATCTA TTATCTCAAATTTCAATATCTGCTTGTGAGATCAGAAATTAGAAGGCTGTTACTAAAATATAGTGGGAGTGATTCCGTAT ACCATGTGTCATGTTATCCATATGGTTAATATATTTCTTGATATACTGGAAATGCTCCTCCTTTATGAACCTACTGCGTG ATTAGATATCTGACATTTAATTTGCTCTTATCTGATATCTTTATTCAGAACTAATGTCTTTTAAAAATACCCTCATTTTT ACATTCAGATATTAGACACTTAATCCTAGAAATCATGCTCCCTTGTGTGGAATCACAAAAAAAAAATCTACTTTAAATTC CTCCTAGTTATTTATTCCTCTCATTTGGGTGAGAAAACCCTTCAATTTCTTGTAATTTACTCAAGCTATACAGGATGATT GATACTGTTTTTCTGACAGACTCTTGGTAATGGTAATATGAACATCGTCCAATCTCCCCATGAGAGGCCTTTTTTTAGCA GCAACTGCACAAGTGAGGAACGCCTGCAAAAGCTCTCTAGATACAGGAATAAGAAGACAAAGAGGAATTTTGGGAGGAAA ATCAAGGTAACATACGTCTACCATCCCTCTGCTATGTGAATTAATTATAGTTGCTCTGGTACCATATCATGAATTAATTA ATTCAAAAGCTTAAGCTGTAGGATGAAGATTCATGAATGGTTTTAAGTTATATTGTAACAATTGCTACCTTCTTAGAACA GGCCATTCATCTTTGGCTTCTGTTCAGAGGGCTTCTAGAATTTGCTTTGTTCAATTCCTTTGGTGATTTTAAGTTTGGAT ATGAGTGCGTGTGTGTGGCTAGCTAGCCATTCATCTATCTTAAATCTTATTTTGATGTCATGGATGAGTACTGTCTTTGA AAATATAACCTTCACCTCGACTTCCGAAACTTCTAGTATCTAATTTTCCATTGCTCTTGTTTCAATGCATTAAAAATCAG ATTCAATAACCATGCCTAATCCCTTGATTACTTGATATGCTTTAACTTGTTAATTATGACATGAAAATAACTTTTTCATG CATCTAACTTTTATTTGGAAATTTTCTTTTGGTTTTCAGTATGCTTGTAGGAAGGCTCTTGCTGACAGTCAACCGAGAAT CCGCGGAAGATTTGCAAAGACCGAAGAATCTGAGGTGAAGAGGGAAGGATTTTGAACTGATTTGGTAGGAAGAAAGTAGG AATCAAGTGGCTAAATCAGATCAAGCAATATGAAGAGCTCGACATTGTAATATGTGCTTGGTAGAGCTGAACAGATAATG GCCAATAAACCAGGCCTCGAACTTCTTTCCTAGGGTAGTTGAGTTCATCTCTTATCTGCTGTATTAACTGTCTCTGTAAA CTGAAATGACCTTCTGAATATGTATATAGGTTTGTTTAATAAAAGAAGGGTGAGAAAGCTGGTACAATGTTCATATATAT GTGATGGAATGGCAATGTTTAGTGGCACTAGTTATTTTTCTGAAATGGATCTTCCAATTTCTTTGAGGTTTTGGTTTGTT GGTCCACATTAGTATTTTAGTTTGATGGTTCAAATTAAGTGGATGGGGAACATTCAGGTTTTTATCCAGCTAGATGTAGG TTAACGTACTAGAGTGAAGCTTCTATAAATGCTAGTTATGAGAGTGTGTCATATTACAACATCTTGAGAAATGCTAGGTG CACAATTGAGAAGCAAAATTCAACAATAGCTATTCATCCCTGCCTCAATTTCACCCACACCCGGAGAGGGGAGTGGTAGG AAGATAAGAGAGAAAAGATAAGAGATAAGAGATATATTAAGTGATGTGATACGAAATACAGAGAGTGATATATGAAGAAA AAATGGTGGAAATGTGATGGAAGATGAAAGGGGATGTAAATGAAACAAAATTCAAAGTTTAATTGTATGAACGTGTGGAA ATTGCTAT
CDS sequence (LotjaGi1g1v0284300.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTCTGTTGGAAAAATGTATGCAGAGGCCAACCTCCTCTACCCATATTTGCACAACTTCTCTCAAGAGCTTCATCAACT TGAGGAGTACTGCACAACCCAGAAGTTCAATGACTCAATGAGTGACCTTGTCGAGTTTTCTTCCATGACGGAGTATGATT TGACAGCCGAGGGAGATCTGTTTAAAGCACCTGAACCTATTATTGAAGAGCCAGTCATGGACCTGGATTCCATGACAGCA GCCATGCCGATGATATCTTGCGGGGAAGATGTGTCCTCACAGGCACTGGAATCCACAGATATTGATATTCTTCAAAATGA ACAGCTTCTGAACGAGGTATTCTATGAATGCAAAAAGGATCTCTTACAAAATGCAGCATTAGTGTCACCACTTTCTGAGA TTCTGGAAGTCAAGATTCCTTTACTGAGCATTGATGAGAATTCAATTCAAGAAAACAAGCCACTTCCTGACATGCCATTA CCAAAGAGCGTCAGTTCCGGAAGTTTGAGCTCAATGGACTGGATGCAAGGAGCTGCGATGAAGCCTGCTTTCCTTGATAT CCCTGGAATAGATCTCAGCGCAGTTTATGGCATGCGGAGATCGTTTAGTGAAGGTGATATAAAGACTCTTGGTAATGGTA ATATGAACATCGTCCAATCTCCCCATGAGAGGCCTTTTTTTAGCAGCAACTGCACAAGTGAGGAACGCCTGCAAAAGCTC TCTAGATACAGGAATAAGAAGACAAAGAGGAATTTTGGGAGGAAAATCAAGTATGCTTGTAGGAAGGCTCTTGCTGACAG TCAACCGAGAATCCGCGGAAGATTTGCAAAGACCGAAGAATCTGAGGTGAAGAGGGAAGGATTTTGA
Protein sequence (LotjaGi1g1v0284300.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSVGKMYAEANLLYPYLHNFSQELHQLEEYCTTQKFNDSMSDLVEFSSMTEYDLTAEGDLFKAPEPIIEEPVMDLDSMTA AMPMISCGEDVSSQALESTDIDILQNEQLLNEVFYECKKDLLQNAALVSPLSEILEVKIPLLSIDENSIQENKPLPDMPL PKSVSSGSLSSMDWMQGAAMKPAFLDIPGIDLSAVYGMRRSFSEGDIKTLGNGNMNIVQSPHERPFFSSNCTSEERLQKL SRYRNKKTKRNFGRKIKYACRKALADSQPRIRGRFAKTEESEVKREGF
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 19 | 285 | 267 | 9.1E-121 | – | |
| PANTHER | 19 | 285 | 267 | 9.1E-121 | – | |
| ProSiteProfiles | 236 | 278 | 43 | 14.763 | ||
| Pfam | 236 | 278 | 43 | 7.9E-17 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi1g1v0284300.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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