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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0286400 |
| Transcript ID | LotjaGi1g1v0286400.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Defective in meristem silencing 3; TAIR: AT3G49250.1 defective in meristem silencing 3; Swiss-Prot: sp|Q94A79|DMS3_ARATH Protein DEFECTIVE IN MERISTEM SILENCING 3; TrEMBL-Plants: tr|I1JYR2|I1JYR2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0286400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:69493814..69501047) extracted from Lotus japonicus Gifu genome v1.2.
GTGAGAGCAAAGGGAGTGTGAAATAAACATTCGAGAGAACACACACCCAACAAAGAGAGAACCTTCCTTCAATTCCTCTG GAACCATGTTTCAACCTCCCAATTCCAACAACAACAACAACAACCAGGTCAGTTTCTCTCTTCGGCATTTTCCTTCTCCA TTTCCCCCTCTCTTTTTGGTTCCTTTGAATTTTGAGACTTTGTAAGGGCTTAGAAAATCATCAATCGTAGAATTTTAGGG TGTATGTAACAAACAATCATAATTAACCATTACCCACATTGATGTTGTTACATGCATAGAAGATTGGGTTTGCTTGGAAT CATTTTAGTCACGCATGGTTGGCAAGGCATTCGAACTCAGGGAACACAGTTCACATTGTATTTTTCTGCTACCTAAAATG CATGTCTGTATATAATTCTTTTTGATTTGATTTTGCCCCCCGTTTTCACAGTTTCCCCTTTGACCTTTTGTGTGATACTC TTAAACATAGTTTTCAATTTTCATGAGTCATGATCATTGTGCCCGCCTCCTTACTTCTCGTTGAATCAACAAAAATAGTC ATCACCATCCGTAGGTTTCCTTGTGCAATTTAGGTTAGCCGTTGTATGTTTATTTTAAGGAAAAAACTAAATGTTACAAC ACGATTTGGCGCGAAACAAGAAAAATGATATGTGGTAGTGTGAGAGATGATTCTGTCCCCACATTTAACCCCATGTTTTT TTAGGTTGTATTTTGACCGGCACATAATTGGTCATTAAGAATTTCGTTGTGTTCGTATCCGTAACAAGAAATACGGCTCT TATTTGAGGCTCATTATCATTTACCATCTAGGGAGTAGCACGTACATTGCTCCATTCTTGTGTGTCTACTGAAATAAAGG ATAAATTGAGCAAGAGTTCTATGCTAATACTCATGGTTGTCAATCTCGAGTAATATCTCGTAATCTACGAGATTACGAGC TTAGGGTGCAAAATTGTGTTACCTCGAGTGTAAACTCGTTTCTGAGTAATCTCAGATGAACTCGCTCAATTTCGCAATAT TACCGGCGGGTTCACGGGATCAAAACACACACGGTGTGATGGTCAAAAACAATTTGTGACAGGGACATTTTAGTAATTTT GGGTATCCTATTAGGGCTTTCCTTTCTCCTCTTCCCCCATTCTGAGTTCTCACGTCCCAACGCGGCTTTGGTGAGGCTCT GAAGGGGCACGAACCTCTGCTCCGACGCTGCTCCTATGCTCTGAAGGTACAACTCTTCTAATCTCTCTTCTCAACTCTCT TCTCATCTCCCCATTCAGTTTTGATGAGTTGCTGTCCTGATTCTGATTCTTTTGTTTTACCCCAATTACTAGGATAGTAG GATAGGATGTCTCAAGTTGAACGGTCAAAAAGCTCAAGAAACAAAGCTTCTTCAAACAGATCTAGGAGGAATAATGCAAT TGGATTCATGGTTTTAGTTGTTCTTAAAGCTGTTACTAGATGATTTAGTTAATTTTTAATGTTTCAGGTGTGTCCACCAT TACTATGGTTTTTTAAAATTTTCTTGTACGGTACGAGTTTTCTTAAGTTCTCAAGTTTGACAACCTTGCTAATACACACA TAACCATTGGCATTCTTAGAATTCTTGATAGGCCTAGCTCTACCCCATACATGCAAAATCTCCTAGGTGAAAACGCGAAA GGAGCTTTGCTTCTCCATTCAATTAAAAGTGAATTTACTTTTATACCAACTATAACCGAAGCACAAACTAAATGCTGGAC TTATGTTCATTCATTTGGGGTGGTCGGGCAGCTTGGGCAATCTATCTGTATTTATGTGAATAAGTTCTTCTTGTGCAGCA TCCAGCCAGCCAAGGCTCTTCGGCATTGGTGCCTGTGGATTTGAATGAAAATTGTGCTGAAGCAAAGGGCAATGTGCAAA ATGGAGAATGGACACAAGCAGAGTCCAACCTCCGACACTCCCAGGTTCCCTATGTTTTATGTTGATTTTACTTTTTATGA GCAGAAATGGATGAATTTTTCTCTACATTTAAAAAAAGGATGTCCCAGTGCACAAAGCTCCTGCATGTGCGGGGTCCGGG AAGGGGTCTGACCATTTGCATCTTACTTTTTCACAGACGTACTATTCTGTTAAGTTTCTGGATTTCGACCGAGTGATGAT GGTTTATACAAACTTATCTTGTACCTATGTCATACTTGCAGATACTACAAGGGGATCTGCATACATTAGGGATGAAAATT AAGCAGCATGAGGACAACCTAAATCTTCTGAACAATGAAAAAAGCAAGTTAGACGATGTCATTCTTCATTTGCAAGGTAT GTTGTATTACTTCTTAAGGATTTTTTCTTCTTTCTTTGGAAAGTGGATAAGAAGCTACTTATCCTGAAAATATTCATGAT CCTGTTCTCTATGGTGCAGATGTGCAGTAACTTAATAAATGTTTAAGTTTTAATATAATTGTATGCACTTGCTCAATGGT GTAATATGATCCATATAGCCGACCTCACTTAGTGGGATAAGACTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTTTTGTT GTTGTAGTTGTTGTTGTATGCACTTGCAAGGTCGGTATTCTATTTACAGCTGAGTACAATACCAGTGATATAGTTATTGG GTCACCGGACCTGTTAGTGTTTTGATTATGAACTACGAAGTTTATGGGGGCATTGTTAATATTACAACATATAGCGTGTA TAGGCTGAAAATTAAGTGTATATATGAAGTGTAGTTATTGGCTATTAATAATATGATAAACTTACAAATTTTAACGCTGT AAATGATCTTTTATTCACCTTTCTATAACAGGTGTATACCAACAAAAGTTAGGTGTCATTTATGTGTTTTTTTTTTTTAA TCCATAGCTACTGTTGAGAGATCAGAGTCTTCAAGTACAACCAAGGCTGGTAATGCGGACGATCCCCACTTTACAACTGA GGAGGTAAATAAAACGATATTGCTGCATGAAAAATCTGCTGCTGGTATTTTGTACCAGCTAAAGACTATTCATCGAGCCC AAGTGTCTCAGCTTTCATTAACAAAGGATGTTGTGGGTATTGTTGCTATGCTGGGCAAAGTTGAGGATGACAATCTTAGC CGGTAATTTTGGCATATATATTTCTTTTTGGCTTGTGAAATCATGTCAGTCTTCTATTATCTTTAAGAAAGACAGAATAA TTTTCTTCTGTATTGCTAATATCTATGAATATGTAAGCACACGTGTGGATAGTTTCAATTAACTTATTTGGAATGCAGAC TTTTCTCGGAGTATCTAGGAGCGGACACTATGCGAGCGGTTGTTTGTAGAACCTATGAAGGAGTTAAAGCTCTTGAAATG TCTGACAATGAAGGCTGCATAAATAAAAGTTCTGGTCTTCACGGGCTAGGTGCTTCTATTGGAAGGCCTTTGGATGGTCG ATTTCTAGTGATATGTCTTGAATCTCTGAGGTAAGACTGCAAGAGTCTTGTGATTTTGTCTTTCATTCGTGGCTATGGAT AAACTTGTTTTTTCCTTTTTAACTTTTCTACCTCTTTTGTTTTAGGCCTTATACTGGCAAATATTTCCTTGATGACTCCG AACGGAAGTTGGACATTTTAAAGCCGAGATTACCCAATGGGGAGTGTCCACCTGGATTTCTGGGGTTTGCTGTCAATATG ATTAATATCGACAGCTGTAACCTATTTTGTGTAACTCCCAGTGGCTATGGCCTCAGAGAAACTCTGTTTTATAATCTCTT TTCTCGTCTACAAGTTTATAAGACAAGAGCTGAAATGATACAAGCACTTCCTCTCATAAGTGACGGTGCTCTTTCTTTAG ATGGAGGAATGGTTAGGAGTTGCGGTGTATTTACCTTGGGCAATAGGTAAGTAAGAGTATGCATGGTTGATATGTCTATG CATTATGTCTAATCTCTTGAAGCATCTGTTGAGAATTATATGACAGGCGGAAACCTAAAACTATACCCATTCTATAATGA AACAAATATTGATATATGAGAAAATATGGATATTAATTCTAAGAAATCATCTAAGGTTCTCCGACATATTTTATGATAGA TTGAAGATGTGGCAAGATATTTTCAATGATATTTTAACAGAAATCAAATTTCTTCATCAGTTTCTTTAGATGTTTTCACT GGCTGTAGTTCACAATGTAGTCACAGGAACAATCCTATCCATAATAGGGTCCAACAACGCATCACAATCTTAGAATTGAC ATAGAAACTCAGATATGAAGTATGTAAGTCTTGATATGTAATCATGCAAAATGGAACCTCTACATAAACATTGAGCCTTG TAAAGTGGAGGTTTTGAAGGTTCTTGAGTTGATATCTTTTCCGTGTTTCCTGATAAAGAACTTATTGTTTTATGTTTTAC AGTTTTGAAAATCCTTTTTGAAAAGTGAGCTTCATTTGAAAATGCTTTTTGTTTTAATTTGTTTGCAGAAGAATGTAACA ATCAAATATGTGATTTTTTTTAAACACTGTTGGGATCTGCAGGGTAGATGTTGATGTGAAATTTCCAAGGCCAGATAAAT CAACTGAGCTTGATGGTGAGATCGAAGCGGAGAGGCAAATGAAGGATATCAAATGGAAGAAGGAAAAGGTTCTGGAGGAT TTGAAAAGGGAACGGACTCTGTTGGACATGGCGAAATTCAATTTCAGTAAAAAGAAGAATGATTTTCTCAAGTTTTTGGC GGAAAGTTCATCATATGCAACTCAGGTAATCTTTCTCAAAATTGGAATTTGGAACCCAGATCATTCATAACATCATCAGT GTGATTTAAAGGCCTCTAATATTACATTTTATTGTTGATTGTTGGAGCAGTTCAAATAGCTTCTACTACATTTTATGAAT GGAAAATGCTAGCAATACTCACTTTAACACTCTCTTTCGGATTTCCCTAGCGTACACAAGTTTTTGGTTGTGTAAAGTTA CACCACCAAACAAATTGTCCCTTCTACCCTTACTCCAAAAATAAATCTCATCTTCATCCTTTCCCTCATCCTTCCCACCC TTAATCTACAAACCCAGAAATCTCTCATCACTGAATATCTATCTTTCACAGTACCACAATTCATCAAACTTCTTCATCAT CATCATCATCATCCCATCTAAGTTCATGGTGGCCAAGATTACCCCTGAACTCATCATCAACTAGGAGACTATAACAATTT CAACAATTTTATATGGTCCCAGCTAAGCGTGGTGAAGTTAAACTTCCCATCATGTTTTTGTTTTTCCATTCTACAACCAT TTTTATGCACTGCTATGTAACTAGAAAGTATATTACCACAAAAATAAGGTAATGAAATCTCAAATCCCTAACAATGCTTC AGTTCTAAAATGAAAACCACCCAATGAAAACTAACCACAACACTCTGAATCGTTCAATACAAAGCAACACGAAGATCCCA TCTTCAAATACCGAAATTACATTAAAAAAAAAGTCGCATGAAAGAGATGGTTTGGCTTCCATCTCCTTCCACCAAAATCA AAGTTTTAATTTTTTCCCAGATCCACTTCATTTGATTTACTCCCCCATTTGATTTTCAATCAATAATGGCTTCATGACCA TCTCGTTGTCGATCTTGTCGGAGTCGGAACCTGATGGGTATTTCTGGATAAACCCAGATCCTAGCAACCAGATCGAACTG CTGCTGGAGCTAGATGCTCGAAGCTGCGAGATGAACCGAGGGTTTCGCGGAGGGAGGACCACCTCACCATGGTTGTCGCC GAATGGAAGGCCATCTCCCGCGAGATCCTTCCCCTGCGTCACCTCCTTCTTCTCCTTCCGCATCCTCGATCTCATCGGAA ACTAAGTCTTCGGCCAAACCCCAACTGCCATAGGGAAGTTGCAGCGGCTCGCCGTGCTGAACCTCGCTGACAACGCCATC CCCGACAAGATTCTGGTGTGGACAGTGGGGGCTCAGTGGGTGGTGGTCGTGTTTGGTGGGGAATGGGTAAGTGCTTTGAT GAATCTGGGTTTGGGTGGGGTTTGTGGATGTGGGTATGGTGGGTTGATGATGATGATGATGATGATGATGATGATGATGA AGAAGAAGAAGGAGAAGAAGAAGATGAATGGTGAAGATGTAGATGAAATTATGTTTTTCTTAGTCTGGATTTGGTTGGAA TGAATCTGGGTTGTTTTTGAATGAAGATAATGAAGATGGTGGAAAGGATAAATATGAGATTAATTTTTGAGGTAAGGGTA GAAGGGACAATTTGTTTGGTGGTGTAACTTTACGCAACCAAAAACTTGTGTATGCTAGGGGGACCCCTCTCTTTCCAACA CTTTTTCATTGATTGTTTGAAATTCATGTGGGCTCCCCTAAAAGATGGGGTCCACTTCCAATATAGTGAGACCCACATTA ATTTTAACCAATCAATAAGAGAGCGTTGAAAATAATGTGTTCAATTGAGTGTTGCTAGGACTGCAAATGAATTTATTCTA TTATTGAGAGCACTCAAAATCCTCTGTCTAAGGTAGTTCTATTTAATGGATAATGATATTATAAAATATTACTACCAAAT TTTGGAAAGGGTATTGTCTATTAATTAGCCAACAATTAATTTCATAATGATGCATGCTTGTTACATTTATCTACTTGCAA GCTTACACAAACATTTAGTTCACATAATTGTTTAAGCTGATGGGAACTTTCCAATAAGATTGCTTCAGATTGTAGTCTAG AACTGTGATGTAGCTCACCATTCTCATATGTTTCTTTAATCTGGCACTTTCAGGCTCAAACTACTTCTGACAGATTCATA CCTAGATGAAGAAATCAAGGCAGTCAGCAAAGCTATGAAGATGATAGTCTGTGACTAACAACTCTGTTCATGAGCTTGTA GTTCATATCCATTTTGTAATCTGGGTCTCGTTGGGGAAAGGTTTCTTGAATTGGTACAAAATTTTTGGATTTAAAAAAAA GCACATTTTTTGTTTCGCTAGACCCTTCTGTTAAGGCCACATTTTTCTTCAAGCTCTGCTGATAAGAAAATCAAACTAGC CTTCAAGACCATGGATAGGACATGCATTTTCTGGGTTCCTTGTACATCAATGAGCTCATTATACTCTTCAGAGAATCTGA ATGTTGTACATCTATGATATTTAGACTTTTTTTCGCTTGTAGTTTTATAATTTTTCGTTTGACCTCAGTTTTTTTTTTGT CTGCCATAAGTTATTAATTATTAAGAGATCAACC
CDS sequence (LotjaGi1g1v0286400.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTTTCAACCTCCCAATTCCAACAACAACAACAACAACCAGCATCCAGCCAGCCAAGGCTCTTCGGCATTGGTGCCTGT GGATTTGAATGAAAATTGTGCTGAAGCAAAGGGCAATGTGCAAAATGGAGAATGGACACAAGCAGAGTCCAACCTCCGAC ACTCCCAGATACTACAAGGGGATCTGCATACATTAGGGATGAAAATTAAGCAGCATGAGGACAACCTAAATCTTCTGAAC AATGAAAAAAGCAAGTTAGACGATGTCATTCTTCATTTGCAAGCTACTGTTGAGAGATCAGAGTCTTCAAGTACAACCAA GGCTGGTAATGCGGACGATCCCCACTTTACAACTGAGGAGGTAAATAAAACGATATTGCTGCATGAAAAATCTGCTGCTG GTATTTTGTACCAGCTAAAGACTATTCATCGAGCCCAAGTGTCTCAGCTTTCATTAACAAAGGATGTTGTGGGTATTGTT GCTATGCTGGGCAAAGTTGAGGATGACAATCTTAGCCGACTTTTCTCGGAGTATCTAGGAGCGGACACTATGCGAGCGGT TGTTTGTAGAACCTATGAAGGAGTTAAAGCTCTTGAAATGTCTGACAATGAAGGCTGCATAAATAAAAGTTCTGGTCTTC ACGGGCTAGGTGCTTCTATTGGAAGGCCTTTGGATGGTCGATTTCTAGTGATATGTCTTGAATCTCTGAGGCCTTATACT GGCAAATATTTCCTTGATGACTCCGAACGGAAGTTGGACATTTTAAAGCCGAGATTACCCAATGGGGAGTGTCCACCTGG ATTTCTGGGGTTTGCTGTCAATATGATTAATATCGACAGCTGTAACCTATTTTGTGTAACTCCCAGTGGCTATGGCCTCA GAGAAACTCTGTTTTATAATCTCTTTTCTCGTCTACAAGTTTATAAGACAAGAGCTGAAATGATACAAGCACTTCCTCTC ATAAGTGACGGTGCTCTTTCTTTAGATGGAGGAATGGTTAGGAGTTGCGGTGTATTTACCTTGGGCAATAGGGTAGATGT TGATGTGAAATTTCCAAGGCCAGATAAATCAACTGAGCTTGATGGTGAGATCGAAGCGGAGAGGCAAATGAAGGATATCA AATGGAAGAAGGAAAAGGTTCTGGAGGATTTGAAAAGGGAACGGACTCTGTTGGACATGGCGAAATTCAATTTCAGTAAA AAGAAGAATGATTTTCTCAAGTTTTTGGCGGAAAGTTCATCATATGCAACTCAGGCTCAAACTACTTCTGACAGATTCAT ACCTAGATGA
Protein sequence (LotjaGi1g1v0286400.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MFQPPNSNNNNNNQHPASQGSSALVPVDLNENCAEAKGNVQNGEWTQAESNLRHSQILQGDLHTLGMKIKQHEDNLNLLN NEKSKLDDVILHLQATVERSESSSTTKAGNADDPHFTTEEVNKTILLHEKSAAGILYQLKTIHRAQVSQLSLTKDVVGIV AMLGKVEDDNLSRLFSEYLGADTMRAVVCRTYEGVKALEMSDNEGCINKSSGLHGLGASIGRPLDGRFLVICLESLRPYT GKYFLDDSERKLDILKPRLPNGECPPGFLGFAVNMINIDSCNLFCVTPSGYGLRETLFYNLFSRLQVYKTRAEMIQALPL ISDGALSLDGGMVRSCGVFTLGNRVDVDVKFPRPDKSTELDGEIEAERQMKDIKWKKEKVLEDLKRERTLLDMAKFNFSK KKNDFLKFLAESSSYATQAQTTSDRFIPR
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 22 | 22 | - | – | |
| PANTHER | 13 | 422 | 410 | 5.3E-171 | – | |
| PANTHER | 13 | 422 | 410 | 5.3E-171 | – | |
| Coils | 62 | 89 | 28 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi1g1v0286400.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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