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LotjaGi1g1v0293800.1

Overview

Field Value
Gene ID LotjaGi1g1v0293800
Transcript ID LotjaGi1g1v0293800.1
Lotus japonicus genome version Gifu v1.2
Description Aldo-keto reductase; TAIR: AT5G53580.1 NAD(P)-linked oxidoreductase superfamily protein; Swiss-Prot: sp|Q56Y42|PLR1_ARATH Pyridoxal reductase, chloroplastic; TrEMBL-Plants: tr|A0A0S3RE79|A0A0S3RE79_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0293800
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr1:71202345..71206288) extracted from Lotus japonicus Gifu genome v1.2.

TCCATAACGAGTTTGAGGATCAATGGTTACCACATGCACACGATCAATCACCACAGCGAACAAAACTACCACCAAACTGA CCCCTTTTCGTGTTGAAAACTGTTGTGTGAGTGTGTGAGTTCTACTCAGCAATGGCACTCTCAGCTTGCAGCAGTCTTGG TCCCTCAAATATCAACCCTTTAACAACACCATCTTTCTCATTCAGCTCTCTCAAATTCCCTCCATTCTGGCCAACGCAAA AGGTATGATTTTCATTTGAATTTGAATTCTACCTTCATGTTGATGTGGGTAGCAACCAGCAAGCTTCTATGGTTGTTGCA GGTGAAAATGGGTCCTCTGAGTGTGTCTCCAATGGGGTTTGGAACATGGGCATGGGGGAACCAGTTGCTTTGGGGGTATC AGCAATCCATGGATGATGAGCTTCAACAAGTCTTCAACTTGGCTCTGGAGAATGGTATCAACCTATTTGACACTGCTGAC TCTTATGGCACCGGAAAGTTTAATGGGCAGAGCGAAAAGCTTCTGGGAAGGTTCATTCGAGAATTTCAAGGTTCATCACA CTTTCCTTTGATTTGGTCTAAATTCATCCTTGTAGGTTGCATTGCTGGTGTATGTAAATTCATTGTAACTTGTTTAATTG ATGTTAATTTGTGGTGTCATGTCATAATGTGTATTCATTACCATTATTATGTTAATTCAAAGTTTGTTCCTTTAGTGTCT TGCGCTTTTTTGGCAAAACAAATCCTCATGTGAGAGTTGATGTTACTGACAAGAACAGTTAAAGGCTTCTCCCCATAGCT CTCTCATAAATGTCTTAGGGAGCATTTAGGCAAATATAGCTTAATTAAGTGCTTATGGCAATACGCGTTTATCGCATGAA TGTTCATTTATAAGCTAATTTGATAAGTTTATTGAATTAAGCTCGAAAGAGATTATTAAGTAGGTATGAGCGCTTATTTG TAAACTAATCTGAGCAACTTAGGAAAAAAAGCTCAAAACAGCTTATGGGTAGGTTAAGCTATTGGCATGTGCTCAGCCAA ACATAGCACTTATGTTATAAGATAAGCTTAAATAAGCTCTTTCAAATAGGACCTTAATGAGAAGATATATGACGGGTTGT AGTGAATTCTTAGATTCCCACTTGTTCACCAAATCATGTGTTCACTTTCTCAGAGCAAAAAGGGAGCCAGCAGAACATAG TGATTGCTACTAAGTTTGCAGCGTATCCATGGCGCCTTACACCAGGGCAATTTGTCAAAGCTTGCAGGTATTCGTTTTTG GTTGTTCCTGATATATTCTCATTCTGCTTGACTTGAATGATTGTACTGGATTAATATAATATATCCACACCTGTCAAATC CTTCCTGAGCTCCCCATTCTTCTCCCATAGAAGTATTTGCTTGATTTATTTCTGTGCTTATGATTTTAAACTTGAATGGA ATAAATTTTCAGGGCATCATTAGATAGGATGCAGCTTGAGCAAATCGGGATAGGACAACTACATTGGTCAACTGCAAATT ATGCTCCTTTCCAGGAATCAGCTCTTTGGGATGGTTTAGTGGCAATGTATGAGAAGGTTACAATAATTCATGTTTACAGT AGTTTTATCTGGTGTATATGCAATAATTCAACTACTGTTGAAAGGCTAGCAGTATTGAATGTGGATAAATTCACTCAGGG TGCTTTTGATAATTCATTTACTTACATGGAATTTCATTTTCCATATATTCTTTTGAAGTTTCAGATCAGCATATTTAAAC ATTGAGTTCCAGTGTTATTTCTGAAAGAAAAAACAATAGTTTTGATTTCTTGATTGATCAAAATTTCTAACTTCATATTT ATATTGTCATTTAGGGTTTAGTTCAAGGTGTTGGAGTAAGCAATTATGGACCAAAGCAGCTTTTGAAGATACATGATTAC CTAAAAGAGCGTGGTGTCCCCTTATGCTCAGCCCAGGTATGCATAATTGGATTCGAATTTCGCTCTACGTATTAGGAAAG TTCCTTTAGATCCCAGTAGAGACTAATAAAGCATGGCATGATTGTCAAACCAGTCACAAATATCCTTGTCTTTGAGAAAC TTCAAAGCAAAGAGAAAAAAGAACAAGCAGAGGAAAGGTAAACATAACAAAACTAATAACTACAATATAGTACGACGCCT CATTGAGTTTCTGAAAGAGGTTTCAGTTTAATGAAAAAGAGTTACTGAATAAGTCCAATGAGTTGTAATTCCTGCACATC ATTTTATCAGTATGCAGCAACCGGTCAGTAATTTTCATGGTCTACTGGTATTCTCTCATTGGTCTTCTTCATGTTTCAAA ACTTCAGGTGCAATTTTCTTTGCTGAGCATGGGGGAAGATCAACTTGAGATCAAGAGTATATGTGATTCTCTGGGCATTC GTGTGATTGCTTATAGTCCTCTAGGACTTGGAATGCTTACTGGGAAATACTCACCATCTAAACTTCCATCTGGGCCAAGG TGTGTTGATATTTTAACAAGTGCTTTAGAACTCTACTTAGTGATTATCTTCATAGCCAATTACATTACTAGATCTTTTTC TTAGTATCTTTGTTGTTGATCACATTTCACAGGGGGTTGCTATTCAAGCAAATACTTCCAGGACTGGATCCTTTATTGAG TTCCCTGAGAGACATCGCAAACAAACGGCGCAAAACCATGTCACAAGTAAAAAAAACAAATCTTCTCATTTTTCTCATGT GTGCTGCTAATTTCATATCAAATTATTCTTGTTTCGATTCAATTTCATATAAAAGTATTGTTTTTTTCAATTCATTGTGA GGCGGATTTCAGTTGAGAGTACTTTTAAGTTTTAACCATTGCTAATAGGAGTCCAAACACACACATGGAGTGGTCGGCTA ATAGGAATCCAAACACACTAAATTTCATATAGAACTACTGACCAAACCACTTGTGTGTTTTTGGATTCCTGTTAGCAATG GCTAAAAGTACTTTCAACAGAAATCCGTCTCACAACGGACTGAAAAAAAAAGAGTACTTTGACGTGAATGCAACGGATAT CCAAACAAGCTTATTATCCTTGTTTTAGGTGTGTGACAAGTGACAATGCTGGGTGCTGAACTTTTACTCTGACTAATCTT GGCCTGAACATACTTTATCATCTAATGCATCTCTTTTATCATGCCAGGTTGCTATTAACTGGTGCATATGCAAAGGCACA GTTCCAATTCCTGGAGTGAAATCAATAACACAAGCAAAGGAAAATCTTGGTGCTCTTGGCTGGCGCCTCTCCTCAGACGA GTTGCTTCGGCTGGAGGGTGCAGCACAGGAATCACCGCGCAGGATGATCCAGAACATTTTCCAAACCAGGTATGCACCCG TATTATTCCATTTGAGACATTACAGCTAAGACATTAAAAGATTAATCAAAAAAGTGCTAAATATAATTGAGCTTGGCTTT GAAACACAGATAATCATGAGGGGCGAGACCACAGCACAAGGTGTGGAGTGTGGACCTATATAAACTGAATGAAGGCTACA TTAGTTCCTATCATCTGGCATCGTGAGAAAGCAAGAGCAGGTAATTGAACCATTTCAATTTCGCTCGCCCAGAAATACCA GCAACAAAGCACTCTGGTGCATGCGTATTGTGACAGACCAGCTCAGTAATTTCAGGAGACCGTGATGGCTCAACGTACTT TTGTATAGACATTATATATAAATTCTTTTACAATTGATTTTAAACTTGGAATCAATTTTGATTAGAAGCATGTGTAAGTA CAAACGTGCTAATAGTAAAAGCTACTTCCAGCAGCATGCTAATACACTATAGTCATGTTAGTACATTACGTTTTTTTTGT TCAAATGTTAGTACATCACATAACTCCCACATTTTTATGAGGAACGTTGCTCTAGTACCTTTATAAAAATATATGATTTG ATATTTTAGTGTATTGTATTTTTT
Download Genomic Sequence

CDS sequence (LotjaGi1g1v0293800.1) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGGCACTCTCAGCTTGCAGCAGTCTTGGTCCCTCAAATATCAACCCTTTAACAACACCATCTTTCTCATTCAGCTCTCT CAAATTCCCTCCATTCTGGCCAACGCAAAAGGTGAAAATGGGTCCTCTGAGTGTGTCTCCAATGGGGTTTGGAACATGGG CATGGGGGAACCAGTTGCTTTGGGGGTATCAGCAATCCATGGATGATGAGCTTCAACAAGTCTTCAACTTGGCTCTGGAG AATGGTATCAACCTATTTGACACTGCTGACTCTTATGGCACCGGAAAGTTTAATGGGCAGAGCGAAAAGCTTCTGGGAAG GTTCATTCGAGAATTTCAAGAGCAAAAAGGGAGCCAGCAGAACATAGTGATTGCTACTAAGTTTGCAGCGTATCCATGGC GCCTTACACCAGGGCAATTTGTCAAAGCTTGCAGGGCATCATTAGATAGGATGCAGCTTGAGCAAATCGGGATAGGACAA CTACATTGGTCAACTGCAAATTATGCTCCTTTCCAGGAATCAGCTCTTTGGGATGGTTTAGTGGCAATGTATGAGAAGGG TTTAGTTCAAGGTGTTGGAGTAAGCAATTATGGACCAAAGCAGCTTTTGAAGATACATGATTACCTAAAAGAGCGTGGTG TCCCCTTATGCTCAGCCCAGGTGCAATTTTCTTTGCTGAGCATGGGGGAAGATCAACTTGAGATCAAGAGTATATGTGAT TCTCTGGGCATTCGTGTGATTGCTTATAGTCCTCTAGGACTTGGAATGCTTACTGGGAAATACTCACCATCTAAACTTCC ATCTGGGCCAAGGGGGTTGCTATTCAAGCAAATACTTCCAGGACTGGATCCTTTATTGAGTTCCCTGAGAGACATCGCAA ACAAACGGCGCAAAACCATGTCACAAGTTGCTATTAACTGGTGCATATGCAAAGGCACAGTTCCAATTCCTGGAGTGAAA TCAATAACACAAGCAAAGGAAAATCTTGGTGCTCTTGGCTGGCGCCTCTCCTCAGACGAGTTGCTTCGGCTGGAGGGTGC AGCACAGGAATCACCGCGCAGGATGATCCAGAACATTTTCCAAACCAGATAA
Download CDS Sequence

Protein sequence (LotjaGi1g1v0293800.1) extracted from Lotus japonicus Gifu v1.2 Proteins.

MALSACSSLGPSNINPLTTPSFSFSSLKFPPFWPTQKVKMGPLSVSPMGFGTWAWGNQLLWGYQQSMDDELQQVFNLALE NGINLFDTADSYGTGKFNGQSEKLLGRFIREFQEQKGSQQNIVIATKFAAYPWRLTPGQFVKACRASLDRMQLEQIGIGQ LHWSTANYAPFQESALWDGLVAMYEKGLVQGVGVSNYGPKQLLKIHDYLKERGVPLCSAQVQFSLLSMGEDQLEIKSICD SLGIRVIAYSPLGLGMLTGKYSPSKLPSGPRGLLFKQILPGLDPLLSSLRDIANKRRKTMSQVAINWCICKGTVPIPGVK SITQAKENLGALGWRLSSDELLRLEGAAQESPRRMIQNIFQTR
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

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Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR43625
30 361 332 4.1E-179 –
PANTHER
PTHR43625:SF5
30 361 332 4.1E-179 –
Gene3D
G3DSA:3.20.20.100
36 362 327 4.7E-75
IPR036812
CDD
cd06660
43 347 305 6.49449E-80
IPR023210
SUPERFAMILY
SSF51430
43 350 308 8.64E-72
IPR036812
Pfam
PF00248
47 346 300 2.4E-63
IPR023210
ProSitePatterns
PS00062
180 197 18 -
IPR018170

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0016491
Molecular function Oxidoreductase activity Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
Subterm of
GO:0055114
Biological process Oxidation-reduction process A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi1g1v0293800.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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