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Field | Value |
---|---|
Gene ID | LotjaGi1g1v0324700 |
Transcript ID | LotjaGi1g1v0324700.1 |
Lotus japonicus genome version | Gifu v1.2 |
Description | Carboxyl methyltransferase; TAIR: AT5G04370.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; Swiss-Prot: sp|Q9SPV4|SAMT_CLABR Salicylate carboxymethyltransferase; TrEMBL-Plants: tr|I1JCM8|I1JCM8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0324700 |
Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:77692905..77696933) extracted from Lotus japonicus Gifu genome v1.2.
ATGGAAGTTACACAGGTTCTACACATGAATGGAGGAGTTGGAGAAGCAAGCTATGCAAACAACTCTTTAGTTCAGGTATT GGAGTAATGTTTTTGTGTTTATAACCATATTACCCATAATCACTTATTTGATGGTAATGTGGTTAGCAAATTATTAAAGT AAAATCAACATGTATTAGAGCATGTTTGATTTCATAATATTTGCAAGTGTTAGAATTGATTTTCCACTTTCACAATTGAT TCTACCTCCAAATCAATTATGGATAAAATTACAAATTCTAACTTTTGTGTGTACATGTCAATTGTAAGATGATGCTCTCT TGCGTCCATCACATGTTCGGGTGGTTTATGCAAATACCGCCATAAATAGTTGTGAATTAGTTGTGAGAATAACATATTCA TAATTATTTAACAACTAATTGATAATTATTTTATAACTATTTCTTAAGTTTCAAACCATATCTCATATGGTCACAAATTT TGTATTTAAAAGCTACAAGCGATATACTAATACACCACCCAAACATGTGGTTGACACTAGAGGAAGCCATTCAAAATAAA TTATTTTACTCTTAACTCATATTTATCATAATGAATTTTATCAAAAACTAATTCTTTCATGGACCAATTATGATAACACT TATAGCACTTATTAAGTAATTATTCTGACTTAATTTGATGTCATTGGTCATACAGCAAAAGGTGATTTCTTTAACAAAGC CTATAAGAGAAGAAGCCATAACCAGCCTTTATTGCACCACATTCCCAAGAAGCCTTGCAATTGCAGACATGGGTTGTTCT TCAGGACCAAACACTCTGTTTGTGGTTTCAGAAATTATCAAGGTTGTGGAAAAGCTTTGCCGAGAGCTGAACCGTAAATC TCCAGAGTACAAGGTGTTTTTGAATGACCTTCCTGGAAATGATTTCAACAACATCTTTAAGTCCCTTGACAGCTTCAAAG AGAAACTAAGTGATGAAATGGAATCGGACATAATGGGTCCATGCTACTTCTATGGGGTTCCTGGTTCTTTCTATGGCAGA GTTTTTCCTAATCAAAGTCTAAATTTTGTCCATTCTTCTTACAGCCTCCAATGGCTATCTAAGGTATGTCTAATCTATAT AGAGGAATTCTCGGGCATGTATCTTATGAAAAAATATGCTATTATATAAGAGTAATATGAATAAATCGTGACTATTACAT GTTTTTTTGTGAATACTGTTAGATCTAATCATGAATATCGTGATTAAAAATTAATTATGTGTGAGATGTTCACTAAAAAA TATCAGGTGACTTATTTTATCTTAACCATTCAATCTTAAATCTAGCGCGCCATCATAATTTGTTCATACCATTTTCACAA CATACATCCCCAAAATTCCCAATTAATAATAGAATAAATAATTGTTGTTTTATTAATTAGGTTCCTGAAGGAGCAGAGAA CAATAAAGACAATATATACATATCGAGAACAAGCCCCTCAAATGTTGTAAAGGCTTACTACGAGCAGTTTCAAAGAGATT TCTCTGTTTTTCTCAAGTGTCGTGCAGAGGAACTAGTTGAAGGGGGTCGCATGGTTCTAACATTTTTGGGAAGAAAGAGT GACAATCCATGTAGCAAGGAGTGTTGCTACATTTGGGAACTTATGGCTAAAGCTCTCAATGATATGGTCATGCAGGTAGA TTCCAATTAATTGGATATGGATTTACTTCGGTCGTTGATTTCCTTCCTACAATCATTGCAATCAAACTTTGCATTCCATT TTGAAAGTAAAAATTTATTGTATTTCGGAAGTTGTATTTTTTTGTAGTATAGCCATAAATTGAAATTCTAGAACACATAA TAAATTTTAAATAATTTTATTATGAGTTGAGGAGTACTAGAAACACACTTTTTTAAACACATTTTCATAGACATTCCCCG ATTTATCTATTCATAAAATAGTCAAGATACTTATGTACTTATTAAAACATATTTTTTTATAAACAAATGTTAGTAAATTA ATCTCTACTCCGGGTTCGAACCCGGACCCTTCACAATTCATCTCACTCAATCCTTATGACCCTAGCTCTTACCACTTATT AAAACATGTGATGACTTTTAAAAAATTAACCCAATCAGGTTGAAGTTTGCTAGAATGTGTTTAAAAGAGTGAGGTGATGC ACTAATAGTTAGGAAAAAAATTACACTGTCAACAAGTAAGATTTTAAAGAAGTTTCACATCAATAAATTAAATTAAATAA AAAGAGAAAAATGTACACGCACAGGCAATGTAAATATTTTTTTACACTGTTAGCAATCAAATTTTCAAGACGTGCAACAA ATAATTTTTTTGTTCAATTTAATTAATTGATGTAGAAATAGTGTTTTTTCCCGTGCGTTGCACATAAAATATGTCTATTG TATTTGATTCATCAATGAATCTTGAATGTGATTATGCGTGTTCGTTTCAATCTTAGATAATTAGGGCAACGCACGGGGAA TATGTCTATTGTATTTGATACATCAATTAATCATGAATGTGATTATGCGTGTTCGTTTAAATCTTAGATAGTTAGGGTAA ATCTTTTAAAATTCGGTTTCAAGATTTGTTTTGGAATTAGGGAACACGTGTCAACAGAAGAGAAGTTATTTAATTATTTT CTAATATAGATTGATATATAGAGGAGGAGATGACTGATGTAGTGTCTTAGATAATTAGGGAAAATCTTTTAAAATTTTAA TGAATTATAATTTCAACACTACATATTTTATTTTTATATTGTTGATTATGAGAAAGAATAGAGGGGGAAATCACGGGATT CCTGTAAATATGTAGTAAATTAGGCTTGAGACTTTTCCTAATTTAAAGAGACAGTGAAAACGGTTTCAAGATTTGTTTTG GAAATAAATTTAGTAAGGAGTAATCTAGGTAAATCTTAGATAATTATGACAAATCTTTTAAAATTCGTTTTCTAGATAAA ATAACACAACAGAAGAGAACTATTTAATGGAATGACACGTAGAATTTTTTAAAAATTTTGGATGATTTGATTTTTAATCA AAATAGGTCAAGATTAATTTGATTTTGAAATAAAATATGTCAAGATTTTATTTAGTAATTAAGGTGCGACACGTGTCAAC AGAAGAGAAGCTCAAATGAGAAGTAATCTGGGAGTAACACCTCATCAAATTGGTTTGATGGAAGTTATTCTTTTCTAATA TATATTGATTGATGTTGACTGATACCTTTTAAATCTGTTTGGTTGAGAATGCATATATTTTTTACACAAAATTAATCTCA ATACAAAACTGTTTTCCCACATTTTTAAAATTTGATTAGTTTAGAGTATCAAAATATGTAGGCTCTGAGTTCATATTCTT TTATTTAGAATTATTCTTATGATATGCTTAATTATTTTTCATATAAATTCCACTTTTAATTTGAAAATGAAACATACTTT TAGGCAATTTGAATATTAAAGTTCTGAGTTAATTTTGAGTGCTTATCAATTTTGTTTGAAGATAGAACATTTTGTTATAA TCAAAGTAAATAGTATACAAAAAAAGAAAATTTTTAAACACACTAGCTCGTAGTATATTAGATACGAATGTCCTTTAAAT ATAGAAAAAAAATTGACAAGATTAATCTGAATCACATTTTATATGCTATAGGGGATTATAAAGGAAGACCAAGTGACTAC TTTCAACATCCCTCAATATACTCCATCTCCATTAGAAGTGAAATGGGAAGTTCTTAAAGAAGGATCATTCGCCATTAATC GCTTGGAGGTGTCAGAAGTGAATTGGAACGCTATGGATGAATGCAATGTTTTTGAATTTGAGTCTGAAATGAATGAATCA CTGAGTGATAGTGGATACAATGTTGCTCAGTGCATGAGGGCAGTGGCTGAACCTTTGCTGGTTAATCACTTTGGTGAAGC TATCATTGAAAAGGTTTTTAGTCGCTACCAAGAAATCTTGGCTGATAGGATGTCTAAGGAGAAAACTAAATTTGTCAATG TTACCATATTGTTGACTAGGAAAGGATGA
CDS sequence (LotjaGi1g1v0324700.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAAGTTACACAGGTTCTACACATGAATGGAGGAGTTGGAGAAGCAAGCTATGCAAACAACTCTTTAGTTCAGCAAAA GGTGATTTCTTTAACAAAGCCTATAAGAGAAGAAGCCATAACCAGCCTTTATTGCACCACATTCCCAAGAAGCCTTGCAA TTGCAGACATGGGTTGTTCTTCAGGACCAAACACTCTGTTTGTGGTTTCAGAAATTATCAAGGTTGTGGAAAAGCTTTGC CGAGAGCTGAACCGTAAATCTCCAGAGTACAAGGTGTTTTTGAATGACCTTCCTGGAAATGATTTCAACAACATCTTTAA GTCCCTTGACAGCTTCAAAGAGAAACTAAGTGATGAAATGGAATCGGACATAATGGGTCCATGCTACTTCTATGGGGTTC CTGGTTCTTTCTATGGCAGAGTTTTTCCTAATCAAAGTCTAAATTTTGTCCATTCTTCTTACAGCCTCCAATGGCTATCT AAGGTTCCTGAAGGAGCAGAGAACAATAAAGACAATATATACATATCGAGAACAAGCCCCTCAAATGTTGTAAAGGCTTA CTACGAGCAGTTTCAAAGAGATTTCTCTGTTTTTCTCAAGTGTCGTGCAGAGGAACTAGTTGAAGGGGGTCGCATGGTTC TAACATTTTTGGGAAGAAAGAGTGACAATCCATGTAGCAAGGAGTGTTGCTACATTTGGGAACTTATGGCTAAAGCTCTC AATGATATGGTCATGCAGGGGATTATAAAGGAAGACCAAGTGACTACTTTCAACATCCCTCAATATACTCCATCTCCATT AGAAGTGAAATGGGAAGTTCTTAAAGAAGGATCATTCGCCATTAATCGCTTGGAGGTGTCAGAAGTGAATTGGAACGCTA TGGATGAATGCAATGTTTTTGAATTTGAGTCTGAAATGAATGAATCACTGAGTGATAGTGGATACAATGTTGCTCAGTGC ATGAGGGCAGTGGCTGAACCTTTGCTGGTTAATCACTTTGGTGAAGCTATCATTGAAAAGGTTTTTAGTCGCTACCAAGA AATCTTGGCTGATAGGATGTCTAAGGAGAAAACTAAATTTGTCAATGTTACCATATTGTTGACTAGGAAAGGATGA
Protein sequence (LotjaGi1g1v0324700.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MEVTQVLHMNGGVGEASYANNSLVQQKVISLTKPIREEAITSLYCTTFPRSLAIADMGCSSGPNTLFVVSEIIKVVEKLC RELNRKSPEYKVFLNDLPGNDFNNIFKSLDSFKEKLSDEMESDIMGPCYFYGVPGSFYGRVFPNQSLNFVHSSYSLQWLS KVPEGAENNKDNIYISRTSPSNVVKAYYEQFQRDFSVFLKCRAEELVEGGRMVLTFLGRKSDNPCSKECCYIWELMAKAL NDMVMQGIIKEDQVTTFNIPQYTPSPLEVKWEVLKEGSFAINRLEVSEVNWNAMDECNVFEFESEMNESLSDSGYNVAQC MRAVAEPLLVNHFGEAIIEKVFSRYQEILADRMSKEKTKFVNVTILLTRKG
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
---|---|---|---|---|---|---|
SUPERFAMILY | 1 | 370 | 370 | 9.64E-137 | ||
PANTHER | 2 | 370 | 369 | 1.1E-189 | – | |
PANTHER | 2 | 370 | 369 | 1.1E-189 | ||
Gene3D | 6 | 354 | 349 | 3.7E-142 | ||
Gene3D | 21 | 290 | 270 | 3.7E-142 | – | |
Pfam | 38 | 369 | 332 | 5.0E-128 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
GO term | Namespace | Name | Definition | Relationships |
---|---|---|---|---|
Molecular function | Methyltransferase activity | Catalysis of the transfer of a methyl group to an acceptor molecule. |
Expression pattern of LotjaGi1g1v0324700.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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