Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0325300 |
| Transcript ID | LotjaGi1g1v0325300.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Carboxyl methyltransferase; TAIR: AT3G11480.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; Swiss-Prot: sp|Q9SPV4|SAMT_CLABR Salicylate carboxymethyltransferase; TrEMBL-Plants: tr|I1MNB4|I1MNB4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0325300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:77828079..77831781) extracted from Lotus japonicus Gifu genome v1.2.
GCCAGAGAAAGAGTGAAGCAAATACAACGAGAATGGAAGTTGCACAGGTTCTACACATGAATGGAGGCGTTGGAGAAGCA AGCTATATATGCAAACAACTCTTTAGTTCAGGTATATGTATTAATCAAATAATGATAACATAATATGTTTTTGTGTTCAC AATCAATCATATTACCCATACCATAATCATGATTTCCTAGTAATTTGCCAAACAGAAGTTATTATTTAAGTAAACTCAAT GCTTATTAAGTGTAATTAATTCGGTATTTGATGTCATATTATTATTGGTCATGCAGCAAAAGGTGATTTCTTTGACAAAG CCTATAAGAGAAGAAGCCATAACCAGCCTTTATTGCAGCACTTTCCCGGGAAGCCTTGCAATTGCAGACATGGGTTGTTC TTCAGGACCAAACACTCTGTATGTGGTTTCAGAAATTATCAAGGCGGTAGAAAAGCTTTGCCAAAACCTGAACCTTAAAT AGAGTACAAGATGTTTTTGAATGACCTTCCTGGAAATGATTTCAACAACATCTTTAACTCCCTTGACAGCTTCAAAGAGA AACTAAATGATGAAGTGGAATCTCGGACAATTGGTCCATGCTACTTCTATGGAGTTCCTGGTTCTTTCTATGGCAGGGTT TTTCCTAATCAAAGTCTGCATTTTGTCCATTCCTCTTACAGCCTTCATTGGCTATCTAAGGTGTGTCTAATCTATAGAGG AATTGTATATTATGAGAAGAAAGCGCACACATTCTTTTAAGAACACACCCCAACACATTTATTGTGATTGATTTATTATT TGAAAAATTCAACACATTTCTCTCACTTTTACAATAATTTGTTGACTTTTCAATAAATAAACCAATCGTAAAAAGTGTGT TGGAGTGTGTCCTTAAAAGAGTGTTTCTATAAAATATGAGAAATGTGGTGTAATATAATAATGATAGAAATAAATAAGAG TAAAATACACTTACCCCCCTCAAGGTTTGCTAGAAAAACACTCCACCCCATTCTTATTTAAAATATACACTCCACCCCAC TCATTTTATCATGTTAACTCCATCCAAAAGATGCTAACGGAATATTCCATTCAAATCAAAATTATTTAATGTAAACTTAT TTTTCCTTTTCTTTTTTTTTCTGGTTATTTTTTTTTCAGAAAAAAACGTCACTTTCTAATATTTGACCAAACAAATATTC TCAATGCTTACATACTGTTGGAGCTGGTATATAAAGTAACCATTTTATAAAATAATTCAAGAATAAATATGTATGAAATA GTTTTAAATTAAAACTTATGGTAAAAGTACGTTAAACTTCCACTCCATAAAAGAATATAAAGTTATATTATTATTTTAAT TAATTAATTAATTTGGATAATATGATCGCGTTGGTTATAACATGTTAAATGTTAAAGTATATATTACTTTTAGTAATTGA AAATGAGGGATGTTATTGATATATGATAAGAGAATTTTATTAAATAATATTCATACATTACTCAATGAATTCATAAGCAA CATTTTTTTATAAATCTAGGAAAAAGAAATTTAATTAGTATTTATTTGGTGAAATTTTAATTAGTATGAAATTAATTTCG AAATATTTTTATATAATTCACTATTTATAAAAATCTTTATTGCCACCACCTAAACTGGGTATTACTAGTAATTGTGATGT TATATTCTTTTTTGTTGAAACTAACGTTTTTTTTTAAACGGAACTGACGTTAAACGATTTTTATTTGAAAGTGAGGTTTT TTTTTTGAAAAAAAATAAAATAAAAAATAACAAGAAAAAAAAAGAAATGGAAAAATAAGTTTACATTAAATAATTTTGAT TTGAATGGAATATTCCGTTAGCATCTTTTGGATGGAGTTAACATGATAAAATGAGTGGGGTGGAGTGTATATTTTGAATA AGAATGGGGTGGAGTGTTTTTCTAGCAAACCTTGAGGGGGGTAAGTGTATTTTACTCAATAAATAATGACCCTTAGATCT AATTATGATTAATATCATTGTTAAAAGTTAATTAATGGTCACATGATCACTTAAAAATTTCTTATGACTTTGACTTAGTA TATTAATCTTAATTAGTCAATATTATATCTAACGATTACAATTTATTTCAACTATTATCCTAAAAGAGCACATTTTTCAT AAGATTTATCTCCGAAATTCACAATTAGTAATAGAATTGAATGTAAATAGTTTATGTTCTATGAATTAGGTTCCCGATGC AGTAGACAACAATAAGGGCAATATTTACATATCCAGCACAAGCCCCTCAAATGTTGTAAAGGCTTATTACAAGCAGTTCC AAAGAGATTTCTCTGTTTTTCTCAAGTGTCGTGTCGAGGAAGTAGTTGAAGGGGGTCAAATGGTCCTAACATTCGTGGGA AGAAGGAGTGACAATCCATGTAGCAAAGAGTGTTGCTACATTTGGGAACTTATGGCTACAGCTCTTAATGATATGGTCAT GCAGGTAGATCCCAAATAATTGGAACAGTACAATTGTTGGTTCCAACGTCACTACAGTCAAGTTTTGCATTTTTAAAAGT TTTTATGAATTTCAGTTTTATTTTTATTTTTATTCACAACCTAGTGTTAAAGAAATAGTATAAAACCATTCATGTAACTC TTACCCAACAACTTAAGTTTTGGGGATAATTGGTTACTTGACATGGTATCGGAGTTTCTATCACCAGGCGGTCCGCCTCC AATTCTTCTAATAAAAAGTTAAATTTATGCACACGGTAAGTGAGCTGTGCATTTATCCACGCTTCAAGCCCAAAGGGCTC TTGCGTGAGGGGGTCTGTTAGAGAAATAATATATATAAAAACATTCATGTGGCTCTTACTCGATCAACTGCTTAAGCTTT TGAGATAATTGGTTGCTTGACACCCCTGATCTGAAACAATTTGATAATTAATCGGTTCGGTTCATATTCGATTTCGAAAA AAAAAAACCTTGAAATTCAAGCCAAACCAACCCTAACACTATTAATTGGTTCAGATTCGGATTTGAGAATCGATCCAAAC CGACCTATGTGCACTAGTACTAAACAAACTAGCTGGTAGTATATACCTGTTAATATATAAATAAATTTGACAAGATTAAT CTGAATCACATTTTTATATGCTATAGGGAATTATAAAGGAAGACCAAGTGACTACTTTCAACATCCCTCAATATACTCCA TCTCAATTAGAAGTGAAATTGGAAGTTCTTAAAGAAGGATCATTCGCCATTAATCGCTTGGAGGTGTCAGAAGTGAATTG GAACGCTCTGGATGAATGGAATGCCTTAGAATTTGAATCAGGAATGAATGAATCACTGAGTGATAATGGTGGATACAATG TTGCTCAATGCATGAGGGCTGTGGCTGAACCTTTGCTGGTTAATCACTTTGGTGAAGATATCATTGAAAAGGTATTTAAT CGCTACCAAGAAATCTTGGCTGATAGGATGTCTAAGGAGAAAACCAAATTTGTCAATGTTACCGTATTGCTGGCTAGAAA AGCATGAGGAGAAGAAGCTTGAACAATCTATGATTCATATTTGTGGTTTTTTCAAAAAGATTATTCCTAATTGTTGTGTT AGTTTGTTTTGTTGATTTAACTTTGGATTGTAATCAGGCAGGAAATGTTATGTTAAGGGAAAATAAAGATAAACAAGGAG TATTATGTTGTACCATGGCTAGT
CDS sequence (LotjaGi1g1v0325300.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTTTTTGAATGACCTTCCTGGAAATGATTTCAACAACATCTTTAACTCCCTTGACAGCTTCAAAGAGAAACTAAATGA TGAAGTGGAATCTCGGACAATTGGTCCATGCTACTTCTATGGAGTTCCTGGTTCTTTCTATGGCAGGGTTTTTCCTAATC AAAGTCTGCATTTTGTCCATTCCTCTTACAGCCTTCATTGGCTATCTAAGGTTCCCGATGCAGTAGACAACAATAAGGGC AATATTTACATATCCAGCACAAGCCCCTCAAATGTTGTAAAGGCTTATTACAAGCAGTTCCAAAGAGATTTCTCTGTTTT TCTCAAGTGTCGTGTCGAGGAAGTAGTTGAAGGGGGTCAAATGGTCCTAACATTCGTGGGAAGAAGGAGTGACAATCCAT GTAGCAAAGAGTGTTGCTACATTTGGGAACTTATGGCTACAGCTCTTAATGATATGGTCATGCAGGGAATTATAAAGGAA GACCAAGTGACTACTTTCAACATCCCTCAATATACTCCATCTCAATTAGAAGTGAAATTGGAAGTTCTTAAAGAAGGATC ATTCGCCATTAATCGCTTGGAGGTGTCAGAAGTGAATTGGAACGCTCTGGATGAATGGAATGCCTTAGAATTTGAATCAG GAATGAATGAATCACTGAGTGATAATGGTGGATACAATGTTGCTCAATGCATGAGGGCTGTGGCTGAACCTTTGCTGGTT AATCACTTTGGTGAAGATATCATTGAAAAGGTATTTAATCGCTACCAAGAAATCTTGGCTGATAGGATGTCTAAGGAGAA AACCAAATTTGTCAATGTTACCGTATTGCTGGCTAGAAAAGCATGA
Protein sequence (LotjaGi1g1v0325300.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MFLNDLPGNDFNNIFNSLDSFKEKLNDEVESRTIGPCYFYGVPGSFYGRVFPNQSLHFVHSSYSLHWLSKVPDAVDNNKG NIYISSTSPSNVVKAYYKQFQRDFSVFLKCRVEEVVEGGQMVLTFVGRRSDNPCSKECCYIWELMATALNDMVMQGIIKE DQVTTFNIPQYTPSQLEVKLEVLKEGSFAINRLEVSEVNWNALDEWNALEFESGMNESLSDNGGYNVAQCMRAVAEPLLV NHFGEDIIEKVFNRYQEILADRMSKEKTKFVNVTVLLARKA
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 280 | 280 | 9.2E-138 | – | |
| Gene3D | 1 | 199 | 199 | 2.4E-104 | – | |
| PANTHER | 1 | 280 | 280 | 9.2E-138 | ||
| Pfam | 1 | 279 | 279 | 9.0E-106 | ||
| SUPERFAMILY | 2 | 280 | 279 | 5.98E-99 | ||
| Gene3D | 70 | 264 | 195 | 2.4E-104 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Methyltransferase activity | Catalysis of the transfer of a methyl group to an acceptor molecule. |
Expression pattern of LotjaGi1g1v0325300.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…