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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0325500 |
| Transcript ID | LotjaGi1g1v0325500.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Carboxyl methyltransferase; TAIR: AT3G11480.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; Swiss-Prot: sp|Q9SPV4|SAMT_CLABR Salicylate carboxymethyltransferase; TrEMBL-Plants: tr|I1JCM8|I1JCM8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0325500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:77893802..77897056) extracted from Lotus japonicus Gifu genome v1.2.
AAAAAAAAAGCCAGAGAAAGAGTGAAGCAAATACAATAACGAGAATGGAAGTTACACAGGTTCTACACATGAATGGAGGC GTTGGAGAAGCAAGTTATGCAAACAACTCCTTAGTTCAGGTATATATGTTAATCAAATAATGATATAAGCATATTACGTA ATGTTTTTGGGTTCATAAGCATGTTACCCATAATCACTTATTTGATGGTACGTAATGTGCTTAGCTGAAATTATTAAAGT AAAATCAACATGTATTAGATTTAGAGCATGTTTGATTTCATATTAGTTGAAAGTGTTAGAATTGATTTTCCACTTTCACA ATTGATTCTACCTCCAAATCAATTATGGATAAAATTACAAATTCTAACTTTTGTGTGTACATGCATGTCAATTGTAAGAT GGGGCTCTCTAGCGTCCATCACCCGATGTGGTTTATGTAAATTCTGCCATAAATTGCTGTGAATTAGTTGTGAGAATAAC AAATTTATAATTATTTAACAACTAATTGATACCTATTTTATAACTATTTTTTGAAGTTACAAACCTTATCTCATATGATT ACAATTTTTGTATTTATAAACTATAAGCGGTATACTAATACACCACCCAAACATGTGGTGGACATTATACAAAGCCATCC AAAATAAATCATTTTCCTTTTAACTCATATTTATGATAATCAATTTTATCAAAAACTAATTCTTTCATGGACCAATTATG ATCATAATGACAACACTTATTCAAAGCATTTATTAAGTAATTGTTCTCAATTAATTTGATGTCATTGGTCATACAGCAAA AGGTGATTTCTTTGACAAAGCCTATAAGAGAAGAAGCTATAACCAGCCTTTATCGTAGCACATTCCCAAGAAGCCTTGCA ATTGCAGACATGGGTTGTTCTTCAGGACCAAACACTCTGTTTGTGGTTTCAGAAACTATCAAGGTTGTGGAAAAGCTTTG CCAAGAGCTGAACCTTAAATCTCCGGAATACAAGGTGTTTTTGAATGATCTTCCTGGAAATGATTTCAACAACATCTTTA AGTCCCTTGACAACTTCAAAGAGAAACTAAGTGATGAAGTGGAATCTAGGATAATTGGTCCATGCTACTTCTATGGGGTT CCTGGTTCTTTCTATGGCAGGGTTTTTCCTAATCAAAGTCTGCATTTTGTCCATTCCTCTTACAGCCTTCATTGGCTATC TAAGGTATGTCTAATCTATAGAGGAATTGTATATTATGAGAAGATGAGCGCACACATTCTTTTAAAGACACACTCCAACA CATTTATTGTGATTGGTTTATTATTTGAAAAATTCAACACATTTATCTCACTTCTAAAACAATTTGTTGACTTTTCAATA AATAAACCAATCGTAAGAAGTGTGTTGGAGTGTATTCTTAAAAGAGTGTGTTACTATAACATTTCTCATAATGAGAAATG TGGTGTTATATGATAATGATAGAAATAAATAATAACCGTTAGATCTAATCATGATTAATATCATGATCAAAAGTTAACTA ATGGTTACATGATCACTTAAAATTTTTATGTGACTTTGACTTAGTATTTTAATCTTAATTAGTTAATATTAGATCTAACG ATCATAATTTATTTCTACCATTATACTTATAGAGCACATTTTTTTCATAAGATTCATCTCCTAAATTCACAATTAGTAAT AATTGAATGTAAATAATTTATGTTCTATGAATTAGGTTCCTGAGGCAGTAGACAACAATAAGGGCAATATTTACATATCC AGCACAAGCCCCTCAAATGTTGTAAAGGCTTACTACAAGCAGTTCCAAGGAGATTTCTCTGTTTTTCTCAAGTGCCGTGC CGAGGAACTAGTTGAAGGGGGTCATATGGTCCTAACATTCTTGGGAAGAAGGAGTGACAATCCATGTAGCAAAGAGTGTT GCTACATTTGGGAACTTTTGGCTACAGCTCTTAATGATATGGTCATGCAGGTAGATCCCAAATAATTGGAACAAATTTAC TACAGCCGTTGGTTCCTACAGTCAAGTTTTGTATTTTCAAAAGTTTTTATGAATTTTAGATTTATGTTTATTTTTATTCA CAATCTATTGTTAGAGAAATAATATATAATCATTCATGTGACCCTTACGCAACAACTTATGTTTTTGGGATAATTAGTTG TTTGACATGATATCAGAGTCTCTATGACCAAGCGTCCAGAGTTCGATTCTTGCCGCATCTAATTCTTATAATAAAAAGTT GAATTTAAGAACATAGGTGGGCTGTGCATTTATCCACGCTTCAAGCTCAAAGGGCTTTTGCGTGAAGGGGCGTGTTAGAG AAAAATAAAAAATCATTCATGTGGTCATTACCCAGCTGCTTAAGCTTTTGGGATAATTTGTTGCTTGACACCCAGTACCT GATATGAACTAATCTGAATATTATCTGTTCGGTTCAGATTCGGTTTCGAAAAAAAAAACTGTGAAATTCAATCCAAACCA ACCCTAACACTATTAATTGGTTCAGATTCAGATTTGATAAGGAACTGATCCAAACTGAGACGTATGTGCACCAGTACTAA ACAAACTAGCTGGTAGTATATACCTTTTAATATATAAATAAATTTGACAAGATTAATCTGAATAACATTTTTATATGCTA TAGGGAATTATAAAGGAAGACCAAGTGACTACTTTCAACATCCCTCTTTATACTCCATCTTCATTAGAAGTGAAATTGGA AGTTCTTAAAGAAGGATCATTCGCCATCAATCGCTTGGAGGTGTCAGAAGTGAATTGGAACGCTATGGATGAACGGAATG CCTTTGAATTTGAATCTGAAATGAATGAATCACTGAGTGATGCTGGATACAATGTTGCTCAGTCTGTGAGGGCTGTGGCT GAACCTATGCTTGTTAATCACTTTGGTGAAGCTATCATTGAAAATGTTTTTAGTCGCTACCAAGAAATCTTGGATGATAG GATGTCTAAGGAGAAAACTAAATTTGTCAATGTTACTATATTGTTGACAAGGAAAGGATGAGGAGAAGAAGCCTGCGCAA TCTATGATTCATATTTGTGGTTTTGTCATAAAGATTTTCTTAATTGTTGTGTTGGTTTGTTTGGTTTAACTTTAGATTGT AATCAGGCAGGAAATCTTATGCTAAGGAAAAATAAAGACAAAACTAGGAGTATTTTGTTGGGTCATGGCTAGTGATATTT GTTTTCAATTGTGTAATGAAATTATTTAAGTGTGGATTATATATGATAATTGTTC
CDS sequence (LotjaGi1g1v0325500.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAAGTTACACAGGTTCTACACATGAATGGAGGCGTTGGAGAAGCAAGTTATGCAAACAACTCCTTAGTTCAGCAAAA GGTGATTTCTTTGACAAAGCCTATAAGAGAAGAAGCTATAACCAGCCTTTATCGTAGCACATTCCCAAGAAGCCTTGCAA TTGCAGACATGGGTTGTTCTTCAGGACCAAACACTCTGTTTGTGGTTTCAGAAACTATCAAGGTTGTGGAAAAGCTTTGC CAAGAGCTGAACCTTAAATCTCCGGAATACAAGGTGTTTTTGAATGATCTTCCTGGAAATGATTTCAACAACATCTTTAA GTCCCTTGACAACTTCAAAGAGAAACTAAGTGATGAAGTGGAATCTAGGATAATTGGTCCATGCTACTTCTATGGGGTTC CTGGTTCTTTCTATGGCAGGGTTTTTCCTAATCAAAGTCTGCATTTTGTCCATTCCTCTTACAGCCTTCATTGGCTATCT AAGGTTCCTGAGGCAGTAGACAACAATAAGGGCAATATTTACATATCCAGCACAAGCCCCTCAAATGTTGTAAAGGCTTA CTACAAGCAGTTCCAAGGAGATTTCTCTGTTTTTCTCAAGTGCCGTGCCGAGGAACTAGTTGAAGGGGGTCATATGGTCC TAACATTCTTGGGAAGAAGGAGTGACAATCCATGTAGCAAAGAGTGTTGCTACATTTGGGAACTTTTGGCTACAGCTCTT AATGATATGGTCATGCAGGGAATTATAAAGGAAGACCAAGTGACTACTTTCAACATCCCTCTTTATACTCCATCTTCATT AGAAGTGAAATTGGAAGTTCTTAAAGAAGGATCATTCGCCATCAATCGCTTGGAGGTGTCAGAAGTGAATTGGAACGCTA TGGATGAACGGAATGCCTTTGAATTTGAATCTGAAATGAATGAATCACTGAGTGATGCTGGATACAATGTTGCTCAGTCT GTGAGGGCTGTGGCTGAACCTATGCTTGTTAATCACTTTGGTGAAGCTATCATTGAAAATGTTTTTAGTCGCTACCAAGA AATCTTGGATGATAGGATGTCTAAGGAGAAAACTAAATTTGTCAATGTTACTATATTGTTGACAAGGAAAGGATGA
Protein sequence (LotjaGi1g1v0325500.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MEVTQVLHMNGGVGEASYANNSLVQQKVISLTKPIREEAITSLYRSTFPRSLAIADMGCSSGPNTLFVVSETIKVVEKLC QELNLKSPEYKVFLNDLPGNDFNNIFKSLDNFKEKLSDEVESRIIGPCYFYGVPGSFYGRVFPNQSLHFVHSSYSLHWLS KVPEAVDNNKGNIYISSTSPSNVVKAYYKQFQGDFSVFLKCRAEELVEGGHMVLTFLGRRSDNPCSKECCYIWELLATAL NDMVMQGIIKEDQVTTFNIPLYTPSSLEVKLEVLKEGSFAINRLEVSEVNWNAMDERNAFEFESEMNESLSDAGYNVAQS VRAVAEPMLVNHFGEAIIENVFSRYQEILDDRMSKEKTKFVNVTILLTRKG
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | 1 | 370 | 370 | 8.31E-134 | ||
| PANTHER | 2 | 370 | 369 | 2.2E-186 | – | |
| PANTHER | 2 | 370 | 369 | 2.2E-186 | ||
| Gene3D | 6 | 354 | 349 | 1.2E-141 | ||
| Gene3D | 21 | 290 | 270 | 1.2E-141 | – | |
| Pfam | 38 | 369 | 332 | 1.5E-127 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Methyltransferase activity | Catalysis of the transfer of a methyl group to an acceptor molecule. |
Expression pattern of LotjaGi1g1v0325500.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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