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LotjaGi1g1v0345600.1

Overview

Field Value
Gene ID LotjaGi1g1v0345600
Transcript ID LotjaGi1g1v0345600.1
Lotus japonicus genome version Gifu v1.2
Description Kinase interacting (KIP1-like) family protein; TAIR: AT1G58215.1 spindle pole body component 110; Swiss-Prot: sp|P0DMS1|NET2A_ARATH Protein NETWORKED 2A; TrEMBL-Plants: tr|K7KJ54|K7KJ54_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0345600
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr1:81229307..81233748) extracted from Lotus japonicus Gifu genome v1.2.

ATCATTGAAAAGTATAAAATAAAAACAGATTTAGTTTAAGTGGGAAATGAAATGGATTATGGCTGCATCCTTGATCAACA TGCTTATGATAATTGATGCGTATATCCTCTTCTTCATCTCTGCCCCATGAGAAGGCATTTTCACCAATATTTGTTCCTCT TATCTCCAATAATTTTTCTACCCTTACTAGATCATCTCTTTTTTGTCACCTTGTCGGTTTCATTTATCTTCATCATCAAG GTTTTACCTCAATGAGTTGAATGTGTTTGATCGCAATACAAGATAAAGATGTTGCATAGGGCAGCAACCAATGCTTATTC ATGGTGGTGGGCAAGCCACATTAGGACAAAACAATCCAAATGGCTGGAACAAAGCCTCCAAGGTAACATATTCGCAGACG ATTTTAGAATGACCCACATTCTCATTTTCTCTTGATTTCACAAACACTCCATTATTTGGAAAATTATGGAGATCTCTTTA TTCTTCTCAAGATGCATTGCTTAAACATGATGCCTTTTTGCTTCCATGTGTATAAATATGATATGATACTTTGCCTTTTT TTATTATTTATTCAAATTTAGAATTGATTGGATTTTAGAAAAGCAGAATAAAATGATTCAAATTGCAGAAAAGCAGATAA ACGTATCACAATGATCTGAAAATCATGCATACATTGATAGCATGAAGAATAACAAGGACAATAAAATGTATATAGAGGGG AATCAGATTATGGCATATTGTAGTTCTCTTGGTTACTTTTGGTTTCCAACTTGTACCTAATTTTCTTACATCTATTGGTC CTAGCTGAATAATCAAGCATTCATTTGGGAAACTCTTCTATAGTTGATTCTGTCCTAGAATCAGTTATAGGAAGAGGCTT ATGTATGTGAGTAGCATCTGGATTCTAAAATTGATTCTGATTAAAGAGAAGTTGATCTGAACATGCTATCATTTGTCAAT GACATGCAAACAATTTTTTTAACAGATATGGAGGAGGTGGTGGCCAAGACGCTCAACATCATCAATAACAACGGGGACTC GTTTGCAGAGAGGGCAGAAATGTACTACAGGAAGAGGCCAGAGCTAGTGACTTTTGTGGAAGAAGCATTTCGAACATTTA GAGCATTAGCTGAAAGATATGATCATCTATCAAAGGAGCTTCAAAGTGCAAACCGCACCATTGGCAGTATCTTCCCAGAA CAAGTCAAATATAGAATAGATGAATATGATGATGAAGAAAGTGTTCCTGGACCAAATTCATCATCTCCATACCTAGGGAT GGACCCAGGTAGGGGTAAAATGTGGTGGTTGTTCCCCAATAGAATTTCTTTTTGAATGTTGTTTATACCCCCCTTAAAAA TTTTAGTCTTTCAACTAGTGACCGCTAATTTTGCATAATGTTTTAAATTTCCGCATTACTCATTTTTTCCAGTTCCGTTC CTATCCAGATCCCAACAATCAAATACAAACACCAGGTATCCCAAAAGCTCCAGAAGTCCCAAAGAAGGATTTTAGAGGTC CAGCCATGTTACTCTCCAAGAAGGGACCACTAAAGAAGAATTTCAGTTCTGAAAAATCTGTTTCAACAACTCCTAGCTCA GGACTGAGTAAGGTTGAAGCACTAGCAGAAGTAGACAAGCTTCAGAAAGAAATTTTGACACTACAGACTGAGAAAGAGTT TGTTAGGAGCTTGTATGAGAATTCCTATGAGAAGTACTGGAAAATTGAAGACCAGATTACAGAAATGCAAAAAAGAGTTT GCACCTTAGAAGATGAGTTTTGCATTAGTACTGTCATAGAGGATAATGAAGCAAGAGTTTTGATGGCAACCACAGCAATT AATTCATGCAAAGAAACCTTGGCTAAGTTGCAAGAAGTGCAAGCAGAATCATCTGAAGAAGCTAAAGCAGCATATGAAAG GGTAAAGGAAGCTCATGACAAGTTTGAAGCCCTTAGAGACCAGTTCCTTTCCAAGCATGCGGGTCTGCAAGACCGAGAAA CAGGACCACAACGTGAAGAGGAAGAGATAGCTAGCTTGGAAGAAGAGATGCAGGATCATGACATGGTGCTTTTGCGAGAG AGGATTAAGGAAAAGCTTGAGGAAGATTCAGGTAACTCCCTCGGTATGACAGAAATGGCCGAGAGGATTGATGATCTTGT GAGTAAGGTTGTGACTTTGGAAACTGCGGTCACTTCTCAGACTGGTTTGGTAAAGAGGCTGAGATCAGAAGCAGATGAAC TTCAGACGAATTTACAAAGCTTGGAAGAGGACAAGGAAATGTTGATAGAAGATTCAGAAATAACCAACAAGAAGCTAAAG GAATTGGAGGAGGAGTTGACAAGAGTTAAAATTATTGATCGGAGTGTCAAAAGGCAAGACAACAACCTCCAAACACATTT CACTGAAGCTGATTGTAATCTTGAGCATCTTTCAGGAAGATTGAAGAATGTGAAGCTAGATGAAGAGGGGGAGAATAATG TACTTTACAACAAAAGTCCAGATGAAAAACTTAGAGAGGAGGAGTCTGAAAAATCTAGTGATAAATTGTCTACTGATAAT TTAGTAACCATAAATGATGTCAAGACAGAAAAGGAGGAGAAGGAAGATTATGATGTAAATCTTGGTGATGTCAGAAATGA AGACGACAACACCAGTTTGAAGGAAAATATTGATTTTGGGACTGAAGGAGTTCTTGAGCTAACACAACAAGATAAGGGTG ATTTGTCTGAGACATTGAGTATTCTTGACACTGAATCACTTAATCTGGGGACTGCCGAGGAAAAAGATCAACCTAACTTG AGGAAGATGCTTGAAAGTGGATTAGATGACAGAGAAAAGATTCCATTGAATGAGTACAATTCAGTTTTAGAGAACTATAA GGATGCAAAGGTGAAGCTCAATGATGTGGAGAAGAAAAATCGAAATAGCATTTTTGAGTTAGCACTTCAGGTAACCAGTT CTCAATCTCTAAATTCTACTTTGCAGGTTGATAAAATCAACAAGAGTATTAAATAAATAATTGTTTTCAAGTGAACTTCA TTGTTTATAATGCAAAGTCTAATAAAAAAGCAATCATTTTAACAAATTTGGCTTAGGAATATGCATTTTAACATTTCTTA CATATGATAATTTATCAGGTTAGTTATAACTTAAAAGGTAATTTATCACAAGAATCAAGTAAATTTTTATACAACCTCGA AAGTTTCACTTATTTTGAAAATGATTTTTACACAAATATTTGTGTAGTCTATGTGTAATGGTTATAGGTAAATTTTGTAC AATAAAATTGAGATATGCACCTGCAGGTAAGAGAATTGAAGGATGTTGTTACCACTAAGGATAAAGAGATAAACATTTTA CAACAGAAGTTAAGATGTTCAGAAACAAATCCAGATGAAAGTCCTAGAACCATTCTCACAGAATATAGATATACACCACA AGAAGCGCTTCTTCGAAACGCAGCTCAAGGCCTTGAAATTCCATCTTCAAACATAGATACAAGCATAGTTAGTACTTCTT TAGCTGAGCAACACCAGCATATAAACCGGGTTGAAAAGCATCATTCCCTTTCAACCATGGAAAAGAAATTTCGATCAGAC ATTGATGATTTGATGGAGGAAAACTTAGAGTTCTGGTTGAGATTTAGCACCTCAGTTCATCAGATTCGAAAGTTCCAAAA TTCCATACAAGACTTGAAAGATGATCTAAGGAAAATAAAGGAAGAAAGTAGGTCTGAAGGGAACTCAAATTCTACACAGC AATCAGTAATAAAGGCAATATATGGACACCTGAGAGAGAGCAGAACTGAGTTATCAGTGTGGCTAGAACATAGTGAAATA TTGCAGGAGGAGTTGCATGGTAGGTATCCATCATTGTGTAACATACAAGATGAAATAGCACGAGCAGCAAATCCAGATTC TACATTAGAAAAAACAGGACTAAGTGATTATCAGGCTGCAAAGTTTCAAGGTGAGGTTCTCAATTTGAAGCAGGAGAGCA ACAAGATTTCCAGTGAATTGCAAGCAAGTCTCAGATTTGTGAAGGGACTTAAAAATGAAGTTGAGAAGATCCTGGAAGAA CTGAGTCCAGCAATTGGAATTCGCAGTCACCAGGACAGCCAGGACCACATGAAACACTCCTCAAGTCGTGCTAGAATACC ATTGAAGTCTTTTTTGTTTGGAATCAAGTTAAAGAAGCAAAGGCAATCGGCCATGTCACATACTAGTACAAAGCTAGAGA AACAAGATAGTGATATAGCAGCAGCTAAAAACGCCCCATTATAGACCAAGTTTTATTTTCTTTTTAAGTACTTAGACAAC TCTACCAAGTTTCATTTGTATTTTTTCCTTAAGATTTGATCTATTTGAAATGGTAGAACTATTTTGAGATACAAACCTTG CAGTATTTGTGTGTGTATATACTTCCAGATAACTTGAATGAA 

CDS sequence (LotjaGi1g1v0345600.1) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGTTGCATAGGGCAGCAACCAATGCTTATTCATGGTGGTGGGCAAGCCACATTAGGACAAAACAATCCAAATGGCTGGA ACAAAGCCTCCAAGATATGGAGGAGGTGGTGGCCAAGACGCTCAACATCATCAATAACAACGGGGACTCGTTTGCAGAGA GGGCAGAAATGTACTACAGGAAGAGGCCAGAGCTAGTGACTTTTGTGGAAGAAGCATTTCGAACATTTAGAGCATTAGCT GAAAGATATGATCATCTATCAAAGGAGCTTCAAAGTGCAAACCGCACCATTGGCAGTATCTTCCCAGAACAAGTCAAATA TAGAATAGATGAATATGATGATGAAGAAAGTGTTCCTGGACCAAATTCATCATCTCCATACCTAGGGATGGACCCAGATC CCAACAATCAAATACAAACACCAGGTATCCCAAAAGCTCCAGAAGTCCCAAAGAAGGATTTTAGAGGTCCAGCCATGTTA CTCTCCAAGAAGGGACCACTAAAGAAGAATTTCAGTTCTGAAAAATCTGTTTCAACAACTCCTAGCTCAGGACTGAGTAA GGTTGAAGCACTAGCAGAAGTAGACAAGCTTCAGAAAGAAATTTTGACACTACAGACTGAGAAAGAGTTTGTTAGGAGCT TGTATGAGAATTCCTATGAGAAGTACTGGAAAATTGAAGACCAGATTACAGAAATGCAAAAAAGAGTTTGCACCTTAGAA GATGAGTTTTGCATTAGTACTGTCATAGAGGATAATGAAGCAAGAGTTTTGATGGCAACCACAGCAATTAATTCATGCAA AGAAACCTTGGCTAAGTTGCAAGAAGTGCAAGCAGAATCATCTGAAGAAGCTAAAGCAGCATATGAAAGGGTAAAGGAAG CTCATGACAAGTTTGAAGCCCTTAGAGACCAGTTCCTTTCCAAGCATGCGGGTCTGCAAGACCGAGAAACAGGACCACAA CGTGAAGAGGAAGAGATAGCTAGCTTGGAAGAAGAGATGCAGGATCATGACATGGTGCTTTTGCGAGAGAGGATTAAGGA AAAGCTTGAGGAAGATTCAGGTAACTCCCTCGGTATGACAGAAATGGCCGAGAGGATTGATGATCTTGTGAGTAAGGTTG TGACTTTGGAAACTGCGGTCACTTCTCAGACTGGTTTGGTAAAGAGGCTGAGATCAGAAGCAGATGAACTTCAGACGAAT TTACAAAGCTTGGAAGAGGACAAGGAAATGTTGATAGAAGATTCAGAAATAACCAACAAGAAGCTAAAGGAATTGGAGGA GGAGTTGACAAGAGTTAAAATTATTGATCGGAGTGTCAAAAGGCAAGACAACAACCTCCAAACACATTTCACTGAAGCTG ATTGTAATCTTGAGCATCTTTCAGGAAGATTGAAGAATGTGAAGCTAGATGAAGAGGGGGAGAATAATGTACTTTACAAC AAAAGTCCAGATGAAAAACTTAGAGAGGAGGAGTCTGAAAAATCTAGTGATAAATTGTCTACTGATAATTTAGTAACCAT AAATGATGTCAAGACAGAAAAGGAGGAGAAGGAAGATTATGATGTAAATCTTGGTGATGTCAGAAATGAAGACGACAACA CCAGTTTGAAGGAAAATATTGATTTTGGGACTGAAGGAGTTCTTGAGCTAACACAACAAGATAAGGGTGATTTGTCTGAG ACATTGAGTATTCTTGACACTGAATCACTTAATCTGGGGACTGCCGAGGAAAAAGATCAACCTAACTTGAGGAAGATGCT TGAAAGTGGATTAGATGACAGAGAAAAGATTCCATTGAATGAGTACAATTCAGTTTTAGAGAACTATAAGGATGCAAAGG TGAAGCTCAATGATGTGGAGAAGAAAAATCGAAATAGCATTTTTGAGTTAGCACTTCAGGTAAGAGAATTGAAGGATGTT GTTACCACTAAGGATAAAGAGATAAACATTTTACAACAGAAGTTAAGATGTTCAGAAACAAATCCAGATGAAAGTCCTAG AACCATTCTCACAGAATATAGATATACACCACAAGAAGCGCTTCTTCGAAACGCAGCTCAAGGCCTTGAAATTCCATCTT CAAACATAGATACAAGCATAGTTAGTACTTCTTTAGCTGAGCAACACCAGCATATAAACCGGGTTGAAAAGCATCATTCC CTTTCAACCATGGAAAAGAAATTTCGATCAGACATTGATGATTTGATGGAGGAAAACTTAGAGTTCTGGTTGAGATTTAG CACCTCAGTTCATCAGATTCGAAAGTTCCAAAATTCCATACAAGACTTGAAAGATGATCTAAGGAAAATAAAGGAAGAAA GTAGGTCTGAAGGGAACTCAAATTCTACACAGCAATCAGTAATAAAGGCAATATATGGACACCTGAGAGAGAGCAGAACT GAGTTATCAGTGTGGCTAGAACATAGTGAAATATTGCAGGAGGAGTTGCATGGTAGGTATCCATCATTGTGTAACATACA AGATGAAATAGCACGAGCAGCAAATCCAGATTCTACATTAGAAAAAACAGGACTAAGTGATTATCAGGCTGCAAAGTTTC AAGGTGAGGTTCTCAATTTGAAGCAGGAGAGCAACAAGATTTCCAGTGAATTGCAAGCAAGTCTCAGATTTGTGAAGGGA CTTAAAAATGAAGTTGAGAAGATCCTGGAAGAACTGAGTCCAGCAATTGGAATTCGCAGTCACCAGGACAGCCAGGACCA CATGAAACACTCCTCAAGTCGTGCTAGAATACCATTGAAGTCTTTTTTGTTTGGAATCAAGTTAAAGAAGCAAAGGCAAT CGGCCATGTCACATACTAGTACAAAGCTAGAGAAACAAGATAGTGATATAGCAGCAGCTAAAAACGCCCCATTATAG 

Protein sequence (LotjaGi1g1v0345600.1) extracted from Lotus japonicus Gifu v1.2 Proteins.

MLHRAATNAYSWWWASHIRTKQSKWLEQSLQDMEEVVAKTLNIINNNGDSFAERAEMYYRKRPELVTFVEEAFRTFRALA ERYDHLSKELQSANRTIGSIFPEQVKYRIDEYDDEESVPGPNSSSPYLGMDPDPNNQIQTPGIPKAPEVPKKDFRGPAML LSKKGPLKKNFSSEKSVSTTPSSGLSKVEALAEVDKLQKEILTLQTEKEFVRSLYENSYEKYWKIEDQITEMQKRVCTLE DEFCISTVIEDNEARVLMATTAINSCKETLAKLQEVQAESSEEAKAAYERVKEAHDKFEALRDQFLSKHAGLQDRETGPQ REEEEIASLEEEMQDHDMVLLRERIKEKLEEDSGNSLGMTEMAERIDDLVSKVVTLETAVTSQTGLVKRLRSEADELQTN LQSLEEDKEMLIEDSEITNKKLKELEEELTRVKIIDRSVKRQDNNLQTHFTEADCNLEHLSGRLKNVKLDEEGENNVLYN KSPDEKLREEESEKSSDKLSTDNLVTINDVKTEKEEKEDYDVNLGDVRNEDDNTSLKENIDFGTEGVLELTQQDKGDLSE TLSILDTESLNLGTAEEKDQPNLRKMLESGLDDREKIPLNEYNSVLENYKDAKVKLNDVEKKNRNSIFELALQVRELKDV VTTKDKEINILQQKLRCSETNPDESPRTILTEYRYTPQEALLRNAAQGLEIPSSNIDTSIVSTSLAEQHQHINRVEKHHS LSTMEKKFRSDIDDLMEENLEFWLRFSTSVHQIRKFQNSIQDLKDDLRKIKEESRSEGNSNSTQQSVIKAIYGHLRESRT ELSVWLEHSEILQEELHGRYPSLCNIQDEIARAANPDSTLEKTGLSDYQAAKFQGEVLNLKQESNKISSELQASLRFVKG LKNEVEKILEELSPAIGIRSHQDSQDHMKHSSSRARIPLKSFLFGIKLKKQRQSAMSHTSTKLEKQDSDIAAAKNAPL 

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER 5 957 953 0.0
PANTHER 5 957 953 0.0
ProSiteProfiles 10 90 81 43.071
Pfam 11 84 74 8.5E-32
Coils 76 96 21 -
MobiDBLite 112 151 40 -
MobiDBLite 118 142 25 -
Coils 187 214 28 -
Coils 281 304 24 -
Coils 387 435 49 -
MobiDBLite 475 498 24 -
MobiDBLite 475 499 25 -
Coils 599 622 24 -
Coils 753 773 21 -
MobiDBLite 935 958 24 -

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
Molecular function Actin binding Interacting selectively and non-covalently with monomeric or multimeric forms of actin, including actin filaments.

Expression data

Expression pattern

Expression pattern of LotjaGi1g1v0345600.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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